RNA–Protein interactions for RNA: ENSMUST00000005749.5

Ctr9-201, Transcript of RNA polymerase-associated protein CTR9 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctr9, Length 4,300 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9-201ENSMUST00000005749 Cln5Q3UMW8 341 aa10.39□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Nkain3Q3URJ8 181 aa10.39□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Lcn4Q62472 185 aa10.39□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Olfr1357Q7TQU7 313 aa10.39□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Hif1anQ8BLR9 349 aa10.39□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Olfr410Q8VFX7 315 aa10.39□□□□□ -0.75
Ctr9-201ENSMUST00000005749 4930412O13RikQ9D5M9 106 aa10.39□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Gm13083A2AGW5 501 aa10.39□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Msl3l2G3X992 371 aa10.39□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Neil3Q8K203 606 aaKnown RBP10.39□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Olfr922Q8VG50 311 aa10.39□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Lamtor1Q9CQ22 161 aa10.39□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Phf7Q9DAG9 307 aa10.39□□□□□ -0.75
Ctr9-201ENSMUST00000005749 FaimQ9WUD8 179 aa10.39□□□□□ -0.75
Ctr9-201ENSMUST00000005749 TrrapQ80YV3 2565 aaKnown RBP10.39□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Prdm13E9PZZ1 754 aa10.39□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Olfr555E9Q547 315 aa10.39□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Gm26965M0QWH4 86 aa10.39□□□□□ -0.75
Ctr9-201ENSMUST00000005749 FblP35550 327 aaKnown RBP10.39□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Nanos1Q80WY3 267 aa10.39□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Paqr7Q80ZE4 345 aa10.39□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Tmprss11fQ8BHM9 439 aa10.39□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Olfr1392Q8VFA6 311 aa10.39□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Olfr669Q8VGU9 317 aa10.39□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Lhfpl3Q9CTN8 222 aa10.39□□□□□ -0.75
Ctr9-201ENSMUST00000005749 TsfmQ9CZR8 324 aa10.39□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Prr30Q9D9B7 401 aa10.39□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Ackr1Q9QUI6 334 aa10.39□□□□□ -0.75
Ctr9-201ENSMUST00000005749 RlfA2A7F4 1918 aa10.38□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Gm13547A2ARC0 163 aa10.38□□□□□ -0.75
Ctr9-201ENSMUST00000005749 6430531B16RikQ3V2J1 307 aa10.38□□□□□ -0.75
Ctr9-201ENSMUST00000005749 C1ql2Q8CFR0 287 aa10.38□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Ms4a6cQ99N08 217 aa10.38□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Olfr951Q9EQ94 314 aa10.38□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Tex101Q9JMI7 250 aa10.38□□□□□ -0.75
Ctr9-201ENSMUST00000005749 NagkQ9QZ08 343 aa10.38□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Anxa10Q9QZ10 324 aa10.38□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Olfr243E9PV96 316 aa10.38□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Olfr746E9Q840 314 aa10.38□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Ca2P00920 260 aaKnown RBP10.38□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Ier2P17950 221 aa10.38□□□□□ -0.75
Ctr9-201ENSMUST00000005749 PmchP56942 165 aa10.38□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Hist1h2baP70696 127 aa10.38□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Usf2Q64705 346 aaKnown RBP10.38□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Ppp1r3cQ7TMB3 317 aa10.38□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Olfr1386Q7TQT0 309 aa10.38□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Olfr1412Q8VET3 321 aa10.38□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Asb5Q9D1A4 329 aa10.38□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Lhx2Q9Z0S2 406 aa10.38□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Phf3B2RQG2 2025 aaKnown RBP10.38□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Ankhd1E9PUR0 2548 aaKnown RBP10.38□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Gm6096D3YTY6 151 aa10.38□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Srp14P16254 110 aaKnown RBP10.38□□□□□ -0.75
Ctr9-201ENSMUST00000005749 CapgP24452 352 aaKnown RBP10.38□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Meox1P32442 253 aa10.38□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Sap30lQ5SQF8 182 aa10.38□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Plk3Q60806 631 aa10.38□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Snrnp40Q6PE01 358 aa10.38□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Olfr875Q7TRE5 310 aa10.38□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Mob3aQ8BSU7 217 aa10.38□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Crispld2Q8BZQ2 495 aa10.38□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Rcc1Q8VE37 421 aa10.38□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Olfr95Q8VFE2 312 aa10.38□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Olfr50Q8VGK5 312 aa10.38□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Ms4a3Q920C4 213 aa10.38□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Gorasp2Q99JX3 451 aa10.38□□□□□ -0.75
Ctr9-201ENSMUST00000005749 FetubQ9QXC1 388 aa10.38□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Xcr1Q9R0M1 322 aa10.38□□□□□ -0.75
Ctr9-201ENSMUST00000005749 C2cd3Q52KB6 2323 aa10.38□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Olfr898L7N1Z5 316 aa10.37□□□□□ -0.75
Ctr9-201ENSMUST00000005749 P01783 136 aa10.37□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Rtp3Q5QGU6 474 aa10.37□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Ewsr1Q61545 655 aaKnown RBP10.37□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Tle4Q62441 773 aa10.37□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Vmn1r36Q8R2E3 305 aa10.37□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Olfr960Q8VET5 316 aa10.37□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Znrf1Q91V17 227 aa10.37□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Vmn1r50Q9EP51 310 aa10.37□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Klk1b27Q9JM71 263 aa10.37□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Gm29049A0A087WSM5 227 aa10.37□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Gm9972E9Q053 102 aa10.37□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Gm21118J3QPK8 227 aa10.37□□□□□ -0.75
Ctr9-201ENSMUST00000005749 H2-M10.1O19443 331 aa10.37□□□□□ -0.75
Ctr9-201ENSMUST00000005749 BaxQ07813 192 aa10.37□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Gm20909Q5FWB5 227 aa10.37□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Gm20852Q5M8R5 227 aa10.37□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Gm20917Q62457 227 aa10.37□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Gm20809Q62458 227 aa10.37□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Gm20865Q62460 227 aa10.37□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Znf511Q6P0X2 227 aa10.37□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Gm20738Q810R8 227 aa10.37□□□□□ -0.75
Ctr9-201ENSMUST00000005749 ShpkQ9D5J6 476 aa10.37□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Gm20806Q9D9T3 227 aa10.37□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Igkv6-14A0A140T8P1 115 aa10.37□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Cd59aO55186 123 aa10.37□□□□□ -0.75
Ctr9-201ENSMUST00000005749 PpicP30412 212 aaKnown RBP10.37□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Sf3b6P59708 125 aaKnown RBP10.37□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Ube2g2P60605 165 aa10.37□□□□□ -0.75
Ctr9-201ENSMUST00000005749 PilraQ2YFS3 302 aa10.37□□□□□ -0.75
Ctr9-201ENSMUST00000005749 Fndc4Q3TR08 231 aa10.37□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 62 ms