RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Zfp971A2BFG8 470 aa11.1□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Gm21118J3QPK8 227 aa11.1□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Ifitm5O88728 134 aa11.1□□□□□ -0.63
Clcn3-201ENSMUST00000004430 CtsaP16675 474 aa11.1□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Fkbp2P45878 140 aaKnown RBP11.1□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Zfp970Q08BU3 522 aa11.1□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Bcl2l15Q08ED0 167 aa11.1□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Defb46Q4QY34 57 aa11.1□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Gm20909Q5FWB5 227 aa11.1□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Gm20852Q5M8R5 227 aa11.1□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Gm20917Q62457 227 aa11.1□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Gm20809Q62458 227 aa11.1□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Gm20865Q62460 227 aa11.1□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Gm20738Q810R8 227 aa11.1□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Atpaf1Q811I0 324 aa11.1□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Fam78bQ8BQN5 261 aa11.1□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Cdc34Q8CFI2 235 aa11.1□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Tmem56Q8CGF5 276 aa11.1□□□□□ -0.63
Clcn3-201ENSMUST00000004430 LiphQ8CIV3 451 aa11.1□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Olfr916Q8VG53 310 aa11.1□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Tbx19Q99ME7 446 aa11.1□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Btf3l4Q9CQH7 158 aaKnown RBP11.1□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Dusp3Q9D7X3 185 aa11.1□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Gm20806Q9D9T3 227 aa11.1□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Tcrg-V5A0A0G2JGV5 113 aa11.1□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Zfp980A2A9J5 645 aa11.1□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Gm14325A2AW67 498 aa11.1□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Slc18b1D3Z5L6 459 aa11.1□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Susd5G3UW60 619 aa11.1□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Gm10097J3KMK7 105 aa11.1□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Wdr1O88342 606 aaKnown RBP11.1□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Rab4aP56371 218 aa11.1□□□□□ -0.63
Clcn3-201ENSMUST00000004430 PnlipQ6P8U6 465 aa11.1□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Gm13757Q7TR17 305 aa11.1□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Aqp11Q8BHH1 271 aa11.1□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Syngr3Q8R191 229 aa11.1□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Olfr827Q8VEV5 322 aa11.1□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Olfr1384Q8VFA8 318 aa11.1□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Dock7Q8R1A4 2130 aaKnown RBP11.1□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Ighv1-54A0A075B5W5 117 aa11.09□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Gm10778A0A087WNP5 499 aa11.09□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Gm438B1ASB3 393 aa11.09□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Ly6g6fB2RXM6 300 aa11.09□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Gm4175D3YTW8 314 aa11.09□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Zfp764E9QAP1 431 aa11.09□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Vmn1r114L7N226 321 aa11.09□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Vmn1r126L7N2C8 321 aa11.09□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Mettl4Q3U034 471 aa11.09□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Klk1b24Q61754 263 aa11.09□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Sys1Q78S06 156 aa11.09□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Megf9Q8BH27 600 aa11.09□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Gm10283Q8C3L5 117 aa11.09□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Tmem230Q8CIB6 120 aa11.09□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Vmn1r89Q8R256 316 aa11.09□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Znf319Q9ERR8 581 aa11.09□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Sptbn1Q62261 2363 aaKnown RBP11.09□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Rp1l1Q8CGM2 1859 aa11.09□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Efna4O08542 206 aa11.09□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Hs3st6Q5GFD5 342 aa11.09□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Klk1b21Q61759 261 aa11.09□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Mob3aQ8BSU7 217 aa11.09□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Olfr1102Q8VES2 324 aa11.09□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Olfr137Q8VFC2 312 aa11.09□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Epdr1Q99M71 224 aa11.09□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Necap1Q9CR95 275 aa11.09□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Cldn15Q9Z0S5 227 aa11.09□□□□□ -0.63
Clcn3-201ENSMUST00000004430 PtprsB0V2N1 1907 aa11.09□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Gm42517A0A1Y7VLQ2 374 aa11.09□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Olfr1496B9EHG2 317 aa11.09□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Gm5108J3QP01 101 aa11.09□□□□□ -0.63
Clcn3-201ENSMUST00000004430 SncaO55042 140 aaKnown RBP11.09□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Fabp4P04117 132 aa11.09□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Olfr1537P34983 314 aa11.09□□□□□ -0.63
Clcn3-201ENSMUST00000004430 AdmP97297 184 aa11.09□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Tff1Q08423 87 aa11.09□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Ctxn2Q3URE8 81 aa11.09□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Olfr1472Q7TQQ9 314 aa11.09□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Aph1aQ8BVF7 265 aa11.09□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Smim4Q8C1Q6 80 aa11.09□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Gpr153Q8K0Z9 631 aa11.09□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Olfr494Q8VG07 314 aa11.09□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Olfr980Q8VH08 310 aa11.09□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Eva1aQ91WM6 156 aa11.09□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Ncor1Q60974 2453 aa11.09□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Cldn18P56857 264 aa11.09□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Osgin2Q3TEE9 550 aa11.09□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Olfr10Q60883 311 aa11.09□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Lrrc10Q8K3W2 274 aa11.09□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Q8VCE4 163 aa11.09□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Olfr1445Q8VFW9 314 aa11.09□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Olfr641Q8VGX6 312 aa11.09□□□□□ -0.63
Clcn3-201ENSMUST00000004430 GgactQ923B0 149 aa11.09□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Actl6bQ99MR0 426 aa11.09□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Sft2d3Q9CSV6 209 aa11.09□□□□□ -0.63
Clcn3-201ENSMUST00000004430 Sptan1P16546 2472 aaKnown RBP11.08□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Saa1P05366 122 aa11.08□□□□□ -0.64
Clcn3-201ENSMUST00000004430 CapgP24452 352 aaKnown RBP11.08□□□□□ -0.64
Clcn3-201ENSMUST00000004430 ParlQ5XJY4 377 aa11.08□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Olfr890Q7TRD9 314 aa11.08□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Olfr360Q8VFP3 317 aa11.08□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 60.3 ms