RNA–Protein interactions for RNA: ENST00000640872.1

PAX6-280, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-280ENST00000640872 MRGPRDQ8TDS7 321 aa11.38□□□□□ -0.59
PAX6-280ENST00000640872 CT55Q8WUE5 264 aa11.38□□□□□ -0.59
PAX6-280ENST00000640872 NANOS1Q8WY41 292 aaKnown RBP11.38□□□□□ -0.59
PAX6-280ENST00000640872 ARRDC1-AS1Q9H2J1 176 aa11.38□□□□□ -0.59
PAX6-280ENST00000640872 EP300Q09472 2414 aaPredicted RBP11.38□□□□□ -0.59
PAX6-280ENST00000640872 SLC17A3O00476 420 aa11.37□□□□□ -0.59
PAX6-280ENST00000640872 GRPP07492 148 aa11.37□□□□□ -0.59
PAX6-280ENST00000640872 LINC00614P0C842 121 aa11.37□□□□□ -0.59
PAX6-280ENST00000640872 TNFSF10P50591 281 aa11.37□□□□□ -0.59
PAX6-280ENST00000640872 DUSP3P51452 185 aaPredicted RBP11.37□□□□□ -0.59
PAX6-280ENST00000640872 TMPRSS3P57727 454 aa11.37□□□□□ -0.59
PAX6-280ENST00000640872 C3AR1Q16581 482 aa11.37□□□□□ -0.59
PAX6-280ENST00000640872 TBC1D28Q2M2D7 210 aa11.37□□□□□ -0.59
PAX6-280ENST00000640872 KRTCAP3Q53RY4 240 aa11.37□□□□□ -0.59
PAX6-280ENST00000640872 MIC13Q5XKP0 118 aa11.37□□□□□ -0.59
PAX6-280ENST00000640872 Q6ZR03 302 aa11.37□□□□□ -0.59
PAX6-280ENST00000640872 OR1L6Q8NGR2 347 aa11.37□□□□□ -0.59
PAX6-280ENST00000640872 VAMP8Q9BV40 100 aa11.37□□□□□ -0.59
PAX6-280ENST00000640872 TTTY12Q9BZ98 90 aa11.37□□□□□ -0.59
PAX6-280ENST00000640872 MS4A5Q9H3V2 200 aa11.37□□□□□ -0.59
PAX6-280ENST00000640872 C12orf49Q9H741 205 aa11.37□□□□□ -0.59
PAX6-280ENST00000640872 LOXL2Q9Y4K0 774 aa11.37□□□□□ -0.59
PAX6-280ENST00000640872 AQP7O14520 342 aa11.36□□□□□ -0.59
PAX6-280ENST00000640872 WNT9BO14905 357 aa11.36□□□□□ -0.59
PAX6-280ENST00000640872 CELA3BP08861 270 aa11.36□□□□□ -0.59
PAX6-280ENST00000640872 IL6RP08887 468 aaPredicted RBP11.36□□□□□ -0.59
PAX6-280ENST00000640872 GABRA6Q16445 453 aa11.36□□□□□ -0.59
PAX6-280ENST00000640872 VASH2Q86V25 355 aa11.36□□□□□ -0.59
PAX6-280ENST00000640872 VN1R17PQ8TDU5 208 aa11.36□□□□□ -0.59
PAX6-280ENST00000640872 C11orf52Q96A22 123 aa11.36□□□□□ -0.59
PAX6-280ENST00000640872 DOCK7Q96N67 2140 aa11.36□□□□□ -0.59
PAX6-280ENST00000640872 C9JCJ5 164 aa11.36□□□□□ -0.59
PAX6-280ENST00000640872 FRMD6-AS1P0C7T7 363 aa11.36□□□□□ -0.59
PAX6-280ENST00000640872 SSTR5P35346 364 aa11.36□□□□□ -0.59
PAX6-280ENST00000640872 VDAC2P45880 294 aaPredicted RBP11.36□□□□□ -0.59
PAX6-280ENST00000640872 RPL31P62899 125 aaKnown RBP11.36□□□□□ -0.59
PAX6-280ENST00000640872 TGFBR3Q03167 851 aa11.36□□□□□ -0.59
PAX6-280ENST00000640872 FOXF2Q12947 444 aa11.36□□□□□ -0.59
PAX6-280ENST00000640872 PDLIM3Q53GG5 364 aaPredicted RBP11.36□□□□□ -0.59
PAX6-280ENST00000640872 RNF114Q9Y508 228 aa11.36□□□□□ -0.59
PAX6-280ENST00000640872 LY96Q9Y6Y9 160 aa11.36□□□□□ -0.59
PAX6-280ENST00000640872 IGHV3-43A0A0B4J1X8 118 aa11.35□□□□□ -0.59
PAX6-280ENST00000640872 FAM90A9PA6NNJ1 464 aa11.35□□□□□ -0.59
PAX6-280ENST00000640872 IQCF6A8MYZ5 107 aa11.35□□□□□ -0.59
PAX6-280ENST00000640872 IGHV3-43DP0DP04 118 aa11.35□□□□□ -0.59
PAX6-280ENST00000640872 GCHFRP30047 84 aa11.35□□□□□ -0.59
PAX6-280ENST00000640872 GABRA2P47869 451 aa11.35□□□□□ -0.59
PAX6-280ENST00000640872 RPP30P78346 268 aaKnown RBP11.35□□□□□ -0.59
PAX6-280ENST00000640872 HOXA4Q00056 320 aaPredicted RBP11.35□□□□□ -0.59
PAX6-280ENST00000640872 BAGE3Q86Y29 109 aa11.35□□□□□ -0.59
PAX6-280ENST00000640872 BAGE2Q86Y30 109 aa11.35□□□□□ -0.59
PAX6-280ENST00000640872 TMEM251Q8N6I4 163 aa11.35□□□□□ -0.59
PAX6-280ENST00000640872 Q8N976 141 aa11.35□□□□□ -0.59
PAX6-280ENST00000640872 C1orf159Q96HA4 380 aa11.35□□□□□ -0.59
PAX6-280ENST00000640872 LRFN3Q9BTN0 628 aa11.35□□□□□ -0.59
PAX6-280ENST00000640872 FBXL7Q9UJT9 491 aa11.35□□□□□ -0.59
PAX6-280ENST00000640872 PSG11Q9UQ72 335 aa11.35□□□□□ -0.59
PAX6-280ENST00000640872 FCN1O00602 326 aa11.35□□□□□ -0.59
PAX6-280ENST00000640872 TFF1P04155 84 aa11.35□□□□□ -0.59
PAX6-280ENST00000640872 MRPS11P82912 194 aaKnown RBP11.35□□□□□ -0.59
PAX6-280ENST00000640872 ARSJQ5FYB0 599 aaPredicted RBP11.35□□□□□ -0.59
PAX6-280ENST00000640872 FBXW9Q5XUX1 488 aa11.35□□□□□ -0.59
PAX6-280ENST00000640872 C11orf53Q8IXP5 236 aa11.35□□□□□ -0.59
PAX6-280ENST00000640872 OR13A1Q8NGR1 328 aa11.35□□□□□ -0.59
PAX6-280ENST00000640872 Q8TCH9 128 aa11.35□□□□□ -0.59
PAX6-280ENST00000640872 LSM4Q9Y4Z0 139 aaKnown RBP11.35□□□□□ -0.59
PAX6-280ENST00000640872 DSPP15924 2871 aaKnown RBP11.34□□□□□ -0.59
PAX6-280ENST00000640872 TRGV10A0A0A0MS01 117 aa11.34□□□□□ -0.59
PAX6-280ENST00000640872 TRBV9A0A0B4J1U6 114 aa11.34□□□□□ -0.59
PAX6-280ENST00000640872 A0A1W2PNU3 283 aaPredicted RBP11.34□□□□□ -0.59
PAX6-280ENST00000640872 LNP1A1A4G5 178 aa11.34□□□□□ -0.59
PAX6-280ENST00000640872 ZNF891A8MT65 544 aaPredicted RBP11.34□□□□□ -0.59
PAX6-280ENST00000640872 SNURFLB1AK76 121 aa11.34□□□□□ -0.59
PAX6-280ENST00000640872 DUTP33316 252 aaKnown RBP11.34□□□□□ -0.59
PAX6-280ENST00000640872 IER3P46695 156 aa11.34□□□□□ -0.59
PAX6-280ENST00000640872 ZNF826PQ6ZT77 177 aa11.34□□□□□ -0.59
PAX6-280ENST00000640872 OR52E5Q8NH55 327 aa11.34□□□□□ -0.59
PAX6-280ENST00000640872 SLC25A40Q8TBP6 338 aa11.34□□□□□ -0.59
PAX6-280ENST00000640872 EAF1Q96JC9 268 aaPredicted RBP11.34□□□□□ -0.59
PAX6-280ENST00000640872 SAMD10Q9BYL1 202 aa11.34□□□□□ -0.59
PAX6-280ENST00000640872 V9GYV3 84 aa11.34□□□□□ -0.59
PAX6-280ENST00000640872 COL27A1Q8IZC6 1860 aaPredicted RBP11.34□□□□□ -0.59
PAX6-280ENST00000640872 DEFB108AA8MXU0 73 aa11.34□□□□□ -0.59
PAX6-280ENST00000640872 GFRA3O60609 400 aa11.34□□□□□ -0.59
PAX6-280ENST00000640872 PROP1O75360 226 aa11.34□□□□□ -0.59
PAX6-280ENST00000640872 RPEL1Q2QD12 228 aa11.34□□□□□ -0.59
PAX6-280ENST00000640872 DCAF12Q5T6F0 453 aa11.34□□□□□ -0.59
PAX6-280ENST00000640872 PRAMEF5Q5TYX0 476 aa11.34□□□□□ -0.59
PAX6-280ENST00000640872 PRAMEF6Q5VXH4 476 aa11.34□□□□□ -0.59
PAX6-280ENST00000640872 SPATA31B1PQ5VZV4 182 aa11.34□□□□□ -0.59
PAX6-280ENST00000640872 C6orf15Q6UXA7 325 aaPredicted RBP11.34□□□□□ -0.59
PAX6-280ENST00000640872 MMD2Q8IY49 270 aa11.34□□□□□ -0.59
PAX6-280ENST00000640872 PRR7Q8TB68 274 aa11.34□□□□□ -0.59
PAX6-280ENST00000640872 SFXN3Q9BWM7 321 aa11.34□□□□□ -0.59
PAX6-280ENST00000640872 A8MXE2 369 aa11.33□□□□□ -0.6
PAX6-280ENST00000640872 ACP1P24666 158 aa11.33□□□□□ -0.6
PAX6-280ENST00000640872 ACP7Q6ZNF0 438 aa11.33□□□□□ -0.6
PAX6-280ENST00000640872 CXorf67Q86X51 503 aaPredicted RBP11.33□□□□□ -0.6
PAX6-280ENST00000640872 TPRX1Q8N7U7 411 aa11.33□□□□□ -0.6
PAX6-280ENST00000640872 OR4B1Q8NGF8 309 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms