RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 ZNF747Q9BV97 191 aa10.39□□□□□ -0.75
GTF3A-209ENST00000640289 FAM212BQ9NTI7 297 aaPredicted RBP10.39□□□□□ -0.75
GTF3A-209ENST00000640289 TMEM140Q9NV12 185 aa10.39□□□□□ -0.75
GTF3A-209ENST00000640289 FLVCR2Q9UPI3 526 aa10.39□□□□□ -0.75
GTF3A-209ENST00000640289 WSB1Q9Y6I7 421 aa10.39□□□□□ -0.75
GTF3A-209ENST00000640289 G3V318 75 aa10.38□□□□□ -0.75
GTF3A-209ENST00000640289 NDUFB6O95139 128 aa10.38□□□□□ -0.75
GTF3A-209ENST00000640289 IGF1P05019 195 aa10.38□□□□□ -0.75
GTF3A-209ENST00000640289 SERPINE2P07093 398 aa10.38□□□□□ -0.75
GTF3A-209ENST00000640289 CD28P10747 220 aa10.38□□□□□ -0.75
GTF3A-209ENST00000640289 EGR2P11161 476 aaPredicted RBP10.38□□□□□ -0.75
GTF3A-209ENST00000640289 MYOD1P15172 320 aa10.38□□□□□ -0.75
GTF3A-209ENST00000640289 UCP1P25874 307 aa10.38□□□□□ -0.75
GTF3A-209ENST00000640289 POU2AF1Q16633 256 aa10.38□□□□□ -0.75
GTF3A-209ENST00000640289 ECSCRQ19T08 205 aa10.38□□□□□ -0.75
GTF3A-209ENST00000640289 TRIM16LQ309B1 348 aa10.38□□□□□ -0.75
GTF3A-209ENST00000640289 OR5AU1Q8NGC0 362 aa10.38□□□□□ -0.75
GTF3A-209ENST00000640289 SPATA3Q8NHX4 192 aa10.38□□□□□ -0.75
GTF3A-209ENST00000640289 GRPEL2Q8TAA5 225 aa10.38□□□□□ -0.75
GTF3A-209ENST00000640289 VSTM2AQ8TAG5 236 aa10.38□□□□□ -0.75
GTF3A-209ENST00000640289 CHPT1Q8WUD6 406 aa10.38□□□□□ -0.75
GTF3A-209ENST00000640289 ARPC1AQ92747 370 aa10.38□□□□□ -0.75
GTF3A-209ENST00000640289 SEC22AQ96IW7 307 aa10.38□□□□□ -0.75
GTF3A-209ENST00000640289 BET1LQ9NYM9 111 aa10.38□□□□□ -0.75
GTF3A-209ENST00000640289 PRR13Q9NZ81 148 aa10.38□□□□□ -0.75
GTF3A-209ENST00000640289 PSMB11A5LHX3 300 aa10.37□□□□□ -0.75
GTF3A-209ENST00000640289 UPK2O00526 184 aa10.37□□□□□ -0.75
GTF3A-209ENST00000640289 CNIH1O95406 144 aa10.37□□□□□ -0.75
GTF3A-209ENST00000640289 IL6RP08887 468 aaPredicted RBP10.37□□□□□ -0.75
GTF3A-209ENST00000640289 OR9G9P0C7N8 305 aa10.37□□□□□ -0.75
GTF3A-209ENST00000640289 ERVK-16P61578 105 aa10.37□□□□□ -0.75
GTF3A-209ENST00000640289 SUPT4H1P63272 117 aaKnown RBP10.37□□□□□ -0.75
GTF3A-209ENST00000640289 C10orf55Q5SWW7 151 aa10.37□□□□□ -0.75
GTF3A-209ENST00000640289 SGPP2Q8IWX5 399 aa10.37□□□□□ -0.75
GTF3A-209ENST00000640289 MMD2Q8IY49 270 aa10.37□□□□□ -0.75
GTF3A-209ENST00000640289 LHFPL5Q8TAF8 219 aa10.37□□□□□ -0.75
GTF3A-209ENST00000640289 GLYATL2Q8WU03 294 aa10.37□□□□□ -0.75
GTF3A-209ENST00000640289 CITED1Q99966 193 aa10.37□□□□□ -0.75
GTF3A-209ENST00000640289 AIFM2Q9BRQ8 373 aa10.37□□□□□ -0.75
GTF3A-209ENST00000640289 TMEM222Q9H0R3 208 aa10.37□□□□□ -0.75
GTF3A-209ENST00000640289 NSG2Q9Y328 171 aa10.37□□□□□ -0.75
GTF3A-209ENST00000640289 TRAV41A0A0B4J266 112 aa10.36□□□□□ -0.75
GTF3A-209ENST00000640289 E7EUB6 86 aa10.36□□□□□ -0.75
GTF3A-209ENST00000640289 OPN1MWP04001 364 aa10.36□□□□□ -0.75
GTF3A-209ENST00000640289 APELAP0DMC3 54 aa10.36□□□□□ -0.75
GTF3A-209ENST00000640289 OPN1MW2P0DN77 364 aa10.36□□□□□ -0.75
GTF3A-209ENST00000640289 OPN1MW3P0DN78 364 aa10.36□□□□□ -0.75
GTF3A-209ENST00000640289 VDAC1P21796 283 aa10.36□□□□□ -0.75
GTF3A-209ENST00000640289 SLC6A1P30531 599 aa10.36□□□□□ -0.75
GTF3A-209ENST00000640289 CRIP2P52943 208 aaPredicted RBP10.36□□□□□ -0.75
GTF3A-209ENST00000640289 RPL8P62917 257 aaKnown RBP10.36□□□□□ -0.75
GTF3A-209ENST00000640289 CFHR3Q02985 330 aa10.36□□□□□ -0.75
GTF3A-209ENST00000640289 ASAH1Q13510 395 aa10.36□□□□□ -0.75
GTF3A-209ENST00000640289 TMEM187Q14656 261 aa10.36□□□□□ -0.75
GTF3A-209ENST00000640289 TCTEX1D4Q5JR98 221 aa10.36□□□□□ -0.75
GTF3A-209ENST00000640289 CENPSQ8N2Z9 138 aa10.36□□□□□ -0.75
GTF3A-209ENST00000640289 LFNGQ8NES3 379 aa10.36□□□□□ -0.75
GTF3A-209ENST00000640289 OR4A5Q8NH83 315 aa10.36□□□□□ -0.75
GTF3A-209ENST00000640289 SGMS2Q8NHU3 365 aa10.36□□□□□ -0.75
GTF3A-209ENST00000640289 SRSF12Q8WXF0 261 aaKnown RBP10.36□□□□□ -0.75
GTF3A-209ENST00000640289 GALNT14Q96FL9 552 aa10.36□□□□□ -0.75
GTF3A-209ENST00000640289 NUBP2Q9Y5Y2 271 aa10.36□□□□□ -0.75
GTF3A-209ENST00000640289 MSGN1A6NI15 193 aa10.35□□□□□ -0.75
GTF3A-209ENST00000640289 CREBL2O60519 120 aaPredicted RBP10.35□□□□□ -0.75
GTF3A-209ENST00000640289 FBXO24O75426 580 aa10.35□□□□□ -0.75
GTF3A-209ENST00000640289 B3GALNT1O75752 331 aa10.35□□□□□ -0.75
GTF3A-209ENST00000640289 CDS2O95674 445 aa10.35□□□□□ -0.75
GTF3A-209ENST00000640289 IGKV1-5P01602 117 aa10.35□□□□□ -0.75
GTF3A-209ENST00000640289 TCRBP04435 133 aa10.35□□□□□ -0.75
GTF3A-209ENST00000640289 PPIFP30405 207 aaKnown RBP10.35□□□□□ -0.75
GTF3A-209ENST00000640289 SLC35B1P78383 322 aa10.35□□□□□ -0.75
GTF3A-209ENST00000640289 DHODHQ02127 395 aa10.35□□□□□ -0.75
GTF3A-209ENST00000640289 PPP1R1AQ13522 171 aa10.35□□□□□ -0.75
GTF3A-209ENST00000640289 IZUMO4Q1ZYL8 232 aa10.35□□□□□ -0.75
GTF3A-209ENST00000640289 TMEM128Q5BJH2 165 aa10.35□□□□□ -0.75
GTF3A-209ENST00000640289 C19orf54Q5BKX5 351 aa10.35□□□□□ -0.75
GTF3A-209ENST00000640289 ASPHD1Q5U4P2 390 aa10.35□□□□□ -0.75
GTF3A-209ENST00000640289 UNQ5815/PRO19632Q6UWF5 114 aa10.35□□□□□ -0.75
GTF3A-209ENST00000640289 SHISA2Q6UWI4 295 aa10.35□□□□□ -0.75
GTF3A-209ENST00000640289 LCNL1Q6ZST4 164 aa10.35□□□□□ -0.75
GTF3A-209ENST00000640289 SLC25A42Q86VD7 318 aa10.35□□□□□ -0.75
GTF3A-209ENST00000640289 SELENOHQ8IZQ5 122 aaKnown RBP10.35□□□□□ -0.75
GTF3A-209ENST00000640289 C20orf85Q9H1P6 137 aa10.35□□□□□ -0.75
GTF3A-209ENST00000640289 ZNF580Q9UK33 172 aa10.35□□□□□ -0.75
GTF3A-209ENST00000640289 KCNIP3Q9Y2W7 256 aa10.35□□□□□ -0.75
GTF3A-209ENST00000640289 A0A0G2JRQ6 117 aa10.34□□□□□ -0.75
GTF3A-209ENST00000640289 A0A1B0GW64 132 aa10.34□□□□□ -0.75
GTF3A-209ENST00000640289 A0A1W2PN81 502 aa10.34□□□□□ -0.75
GTF3A-209ENST00000640289 SOX15O60248 233 aa10.34□□□□□ -0.75
GTF3A-209ENST00000640289 ACTL6BO94805 426 aa10.34□□□□□ -0.75
GTF3A-209ENST00000640289 HLA-GP17693 338 aa10.34□□□□□ -0.75
GTF3A-209ENST00000640289 ANXA7P20073 488 aaKnown RBP10.34□□□□□ -0.75
GTF3A-209ENST00000640289 VAMP1P23763 118 aa10.34□□□□□ -0.75
GTF3A-209ENST00000640289 MAS1LP35410 378 aa10.34□□□□□ -0.75
GTF3A-209ENST00000640289 CHRNA7P36544 502 aa10.34□□□□□ -0.75
GTF3A-209ENST00000640289 RPL27AP46776 148 aaKnown RBP10.34□□□□□ -0.75
GTF3A-209ENST00000640289 AKR1C2P52895 323 aa10.34□□□□□ -0.75
GTF3A-209ENST00000640289 OR2B8PP59922 312 aa10.34□□□□□ -0.75
GTF3A-209ENST00000640289 TMEM268Q5VZI3 342 aa10.34□□□□□ -0.75
GTF3A-209ENST00000640289 MZT2BQ6NZ67 158 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms