RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 EEF1AKMT3Q96AZ1 226 aa3.66□□□□□ -1.82
SCN3A-209ENST00000639244 RASL10BQ96S79 203 aa3.66□□□□□ -1.82
SCN3A-209ENST00000639244 FAM236DA0A1B0GTK5 79 aa3.66□□□□□ -1.82
SCN3A-209ENST00000639244 EIF4EP06730 217 aaKnown RBP3.66□□□□□ -1.82
SCN3A-209ENST00000639244 FAM236CP0DP71 79 aa3.66□□□□□ -1.82
SCN3A-209ENST00000639244 CLEC4CQ8WTT0 213 aa3.66□□□□□ -1.82
SCN3A-209ENST00000639244 RCL1Q9Y2P8 373 aaKnown RBP3.66□□□□□ -1.82
SCN3A-209ENST00000639244 ZNF736B4DX44 427 aaPredicted RBP3.66□□□□□ -1.82
SCN3A-209ENST00000639244 IFNL4K9M1U5 179 aa3.66□□□□□ -1.82
SCN3A-209ENST00000639244 CXCL12P48061 93 aa3.66□□□□□ -1.82
SCN3A-209ENST00000639244 SNRPFP62306 86 aaKnown RBP3.66□□□□□ -1.82
SCN3A-209ENST00000639244 TMEM136Q6ZRR5 245 aa3.66□□□□□ -1.82
SCN3A-209ENST00000639244 HMGN2P46Q86SG4 172 aa3.66□□□□□ -1.82
SCN3A-209ENST00000639244 OR9G1Q8NH87 305 aa3.66□□□□□ -1.82
SCN3A-209ENST00000639244 STAG3L4Q8TBR4 150 aa3.66□□□□□ -1.82
SCN3A-209ENST00000639244 NDC1Q9BTX1 674 aa3.66□□□□□ -1.82
SCN3A-209ENST00000639244 TMEM147Q9BVK8 224 aa3.66□□□□□ -1.82
SCN3A-209ENST00000639244 FNDC1Q4ZHG4 1894 aaPredicted RBP3.66□□□□□ -1.82
SCN3A-209ENST00000639244 KBTBD11O94819 623 aa3.66□□□□□ -1.82
SCN3A-209ENST00000639244 IGHA1P01876 353 aa3.66□□□□□ -1.82
SCN3A-209ENST00000639244 SSR4P51571 173 aa3.66□□□□□ -1.82
SCN3A-209ENST00000639244 CCL23P55773 120 aa3.66□□□□□ -1.82
SCN3A-209ENST00000639244 IHHQ14623 411 aa3.66□□□□□ -1.82
SCN3A-209ENST00000639244 RTP5Q14D33 572 aa3.66□□□□□ -1.82
SCN3A-209ENST00000639244 C4orf26Q17RF5 130 aa3.66□□□□□ -1.82
SCN3A-209ENST00000639244 FAM213BQ8TBF2 198 aa3.66□□□□□ -1.82
SCN3A-209ENST00000639244 AQP3Q92482 292 aa3.66□□□□□ -1.82
SCN3A-209ENST00000639244 A0A1W2PPK0 400 aa3.66□□□□□ -1.82
SCN3A-209ENST00000639244 FAM90A27PA6NNH2 459 aa3.66□□□□□ -1.82
SCN3A-209ENST00000639244 ZNF727A8MUV8 499 aa3.66□□□□□ -1.82
SCN3A-209ENST00000639244 NEURL1O76050 574 aa3.66□□□□□ -1.82
SCN3A-209ENST00000639244 ATP5G1P05496 136 aa3.66□□□□□ -1.82
SCN3A-209ENST00000639244 ATP5G3P48201 142 aa3.66□□□□□ -1.82
SCN3A-209ENST00000639244 REG1BP48304 166 aa3.66□□□□□ -1.82
SCN3A-209ENST00000639244 ATP5G2Q06055 141 aa3.66□□□□□ -1.82
SCN3A-209ENST00000639244 C1orf159Q96HA4 380 aa3.66□□□□□ -1.82
SCN3A-209ENST00000639244 TSSK6Q9BXA6 273 aa3.66□□□□□ -1.82
SCN3A-209ENST00000639244 SF3B6Q9Y3B4 125 aaKnown RBP3.66□□□□□ -1.82
SCN3A-209ENST00000639244 LRP5O75197 1615 aa3.66□□□□□ -1.82
SCN3A-209ENST00000639244 PITX3O75364 302 aa3.65□□□□□ -1.82
SCN3A-209ENST00000639244 STK17BO94768 372 aa3.65□□□□□ -1.82
SCN3A-209ENST00000639244 DANCRP0C864 163 aa3.65□□□□□ -1.82
SCN3A-209ENST00000639244 CYBAP13498 195 aa3.65□□□□□ -1.82
SCN3A-209ENST00000639244 LINC00303Q3SY05 128 aa3.65□□□□□ -1.82
SCN3A-209ENST00000639244 HRCT1Q6UXD1 115 aa3.65□□□□□ -1.82
SCN3A-209ENST00000639244 ADAT3Q96EY9 351 aaPredicted RBP3.65□□□□□ -1.82
SCN3A-209ENST00000639244 SCGB3A2Q96PL1 93 aa3.65□□□□□ -1.82
SCN3A-209ENST00000639244 TMEM30AQ9NV96 361 aa3.65□□□□□ -1.82
SCN3A-209ENST00000639244 DIP2BQ9P265 1576 aa3.65□□□□□ -1.82
SCN3A-209ENST00000639244 TCRBV7S3A2A0A539 114 aa3.65□□□□□ -1.82
SCN3A-209ENST00000639244 PRSS46E5RG02 174 aa3.65□□□□□ -1.82
SCN3A-209ENST00000639244 AGFG2O95081 481 aa3.65□□□□□ -1.82
SCN3A-209ENST00000639244 MT-ATP8P03928 68 aa3.65□□□□□ -1.82
SCN3A-209ENST00000639244 HOXB4P17483 251 aaPredicted RBP3.65□□□□□ -1.82
SCN3A-209ENST00000639244 APOBEC1P41238 236 aaKnown RBP3.65□□□□□ -1.82
SCN3A-209ENST00000639244 C8orf82Q6P1X6 216 aaPredicted RBP3.65□□□□□ -1.82
SCN3A-209ENST00000639244 Q6ZWC4 215 aa3.65□□□□□ -1.82
SCN3A-209ENST00000639244 TP53INP2Q8IXH6 220 aa3.65□□□□□ -1.82
SCN3A-209ENST00000639244 TMEM101Q96IK0 257 aa3.65□□□□□ -1.82
SCN3A-209ENST00000639244 VGLL1Q99990 258 aa3.65□□□□□ -1.82
SCN3A-209ENST00000639244 SMIM7Q9BQ49 75 aa3.65□□□□□ -1.82
SCN3A-209ENST00000639244 NMES1Q9C002 83 aa3.65□□□□□ -1.82
SCN3A-209ENST00000639244 TCF19Q9Y242 345 aa3.65□□□□□ -1.82
SCN3A-209ENST00000639244 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.65□□□□□ -1.82
SCN3A-209ENST00000639244 EEF1E1-BLOC1S5C9J1V9 151 aa3.65□□□□□ -1.82
SCN3A-209ENST00000639244 SMIM13P0DJ93 91 aa3.65□□□□□ -1.82
SCN3A-209ENST00000639244 GPR183P32249 361 aa3.65□□□□□ -1.82
SCN3A-209ENST00000639244 HERVK_113P63121 156 aa3.65□□□□□ -1.82
SCN3A-209ENST00000639244 RNPS1Q15287 305 aaKnown RBP3.65□□□□□ -1.82
SCN3A-209ENST00000639244 Q71RC1 249 aaPredicted RBP3.65□□□□□ -1.82
SCN3A-209ENST00000639244 PLPPR2Q96GM1 343 aa3.65□□□□□ -1.82
SCN3A-209ENST00000639244 CHST6Q9GZX3 395 aa3.65□□□□□ -1.82
SCN3A-209ENST00000639244 WNT10BO00744 389 aa3.65□□□□□ -1.83
SCN3A-209ENST00000639244 SLC25A14O95258 325 aaPredicted RBP3.65□□□□□ -1.83
SCN3A-209ENST00000639244 YBX1P67809 324 aaKnown RBP3.65□□□□□ -1.83
SCN3A-209ENST00000639244 Q0VG73 95 aa3.65□□□□□ -1.83
SCN3A-209ENST00000639244 VGLL4Q14135 290 aa3.65□□□□□ -1.83
SCN3A-209ENST00000639244 Q6Q795 121 aa3.65□□□□□ -1.83
SCN3A-209ENST00000639244 CBLL1Q75N03 491 aa3.65□□□□□ -1.83
SCN3A-209ENST00000639244 CLEC4DQ8WXI8 215 aa3.65□□□□□ -1.83
SCN3A-209ENST00000639244 KLK6Q92876 244 aa3.65□□□□□ -1.83
SCN3A-209ENST00000639244 KCNS1Q96KK3 526 aa3.65□□□□□ -1.83
SCN3A-209ENST00000639244 AQP10Q96PS8 301 aa3.65□□□□□ -1.83
SCN3A-209ENST00000639244 MGST2Q99735 147 aa3.65□□□□□ -1.83
SCN3A-209ENST00000639244 ISG20L2Q9H9L3 353 aaKnown RBP3.65□□□□□ -1.83
SCN3A-209ENST00000639244 ZNF331Q9NQX6 463 aaPredicted RBP3.65□□□□□ -1.83
SCN3A-209ENST00000639244 NUP98P52948 1817 aa3.65□□□□□ -1.83
SCN3A-209ENST00000639244 LGALS2P05162 132 aa3.65□□□□□ -1.83
SCN3A-209ENST00000639244 CTRLP40313 264 aa3.65□□□□□ -1.83
SCN3A-209ENST00000639244 ANKRD37Q7Z713 158 aa3.65□□□□□ -1.83
SCN3A-209ENST00000639244 ZNF563Q8TA94 476 aa3.65□□□□□ -1.83
SCN3A-209ENST00000639244 KIR2DL4Q99706 377 aa3.65□□□□□ -1.83
SCN3A-209ENST00000639244 ZNF256Q9Y2P7 627 aaPredicted RBP3.65□□□□□ -1.83
SCN3A-209ENST00000639244 TNFP01375 233 aa3.65□□□□□ -1.83
SCN3A-209ENST00000639244 CAV3P56539 151 aa3.65□□□□□ -1.83
SCN3A-209ENST00000639244 MYBPHQ13203 477 aa3.65□□□□□ -1.83
SCN3A-209ENST00000639244 PRR31Q5SQ13 230 aa3.65□□□□□ -1.83
SCN3A-209ENST00000639244 SGPP2Q8IWX5 399 aa3.65□□□□□ -1.83
SCN3A-209ENST00000639244 KXD1Q9BQD3 176 aa3.65□□□□□ -1.83
SCN3A-209ENST00000639244 DLL1O00548 723 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms