RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 ST6GALNAC3Q8NDV1 305 aa15.73■□□□□ 0.11
SCARB2-213ENST00000638680 HOXA5P20719 270 aa15.73■□□□□ 0.11
SCARB2-213ENST00000638680 ZCCHC14Q8WYQ9 949 aaKnown RBP15.73■□□□□ 0.11
SCARB2-213ENST00000638680 CDCP2Q5VXM1 449 aa15.72■□□□□ 0.11
SCARB2-213ENST00000638680 SCO2A0A1W2PP80 73 aa15.72■□□□□ 0.11
SCARB2-213ENST00000638680 CGAP01215 116 aa15.72■□□□□ 0.11
SCARB2-213ENST00000638680 SMIM13P0DJ93 91 aa15.72■□□□□ 0.11
SCARB2-213ENST00000638680 RELQ04864 619 aaPredicted RBP15.72■□□□□ 0.11
SCARB2-213ENST00000638680 OR4C13Q8NGP0 309 aa15.72■□□□□ 0.11
SCARB2-213ENST00000638680 A0A087WWC5 75 aa15.72■□□□□ 0.11
SCARB2-213ENST00000638680 A1L4Q6 167 aa15.72■□□□□ 0.11
SCARB2-213ENST00000638680 PCOLCEQ15113 449 aa15.72■□□□□ 0.11
SCARB2-213ENST00000638680 CYP2G1PQ6ZSU1 146 aa15.72■□□□□ 0.11
SCARB2-213ENST00000638680 TRAV30A0A087WSZ9 112 aa15.71■□□□□ 0.11
SCARB2-213ENST00000638680 AHRRA9YTQ3 701 aa15.71■□□□□ 0.11
SCARB2-213ENST00000638680 PRSS2P07478 247 aa15.71■□□□□ 0.11
SCARB2-213ENST00000638680 PEF1Q9UBV8 284 aaKnown RBP15.71■□□□□ 0.11
SCARB2-213ENST00000638680 SCARF2Q96GP6 870 aaPredicted RBP15.71■□□□□ 0.11
SCARB2-213ENST00000638680 SCN4AP35499 1836 aa15.71■□□□□ 0.11
SCARB2-213ENST00000638680 A0A1W2PS18 150 aa15.71■□□□□ 0.11
SCARB2-213ENST00000638680 NPIPB6E9PJ23 425 aa15.71■□□□□ 0.11
SCARB2-213ENST00000638680 WNT9BO14905 357 aa15.71■□□□□ 0.11
SCARB2-213ENST00000638680 ST6GALNAC6Q969X2 333 aa15.71■□□□□ 0.11
SCARB2-213ENST00000638680 GALNT14Q96FL9 552 aa15.71■□□□□ 0.11
SCARB2-213ENST00000638680 KCNS1Q96KK3 526 aa15.71■□□□□ 0.11
SCARB2-213ENST00000638680 RGPD3A6NKT7 1758 aaPredicted RBP15.71■□□□□ 0.1
SCARB2-213ENST00000638680 hCG_38984A0A1B0GV85 526 aa15.7■□□□□ 0.1
SCARB2-213ENST00000638680 LIPFP07098 398 aa15.7■□□□□ 0.1
SCARB2-213ENST00000638680 ATP5G3P48201 142 aa15.7■□□□□ 0.1
SCARB2-213ENST00000638680 SMAGPQ0VAQ4 97 aa15.7■□□□□ 0.1
SCARB2-213ENST00000638680 SDF2L1Q9HCN8 221 aa15.7■□□□□ 0.1
SCARB2-213ENST00000638680 PROB1E7EW31 1015 aa15.7■□□□□ 0.1
SCARB2-213ENST00000638680 LDLRAD4O15165 306 aa15.7■□□□□ 0.1
SCARB2-213ENST00000638680 PF4V1P10720 104 aa15.7■□□□□ 0.1
SCARB2-213ENST00000638680 GPR82Q96P67 336 aa15.7■□□□□ 0.1
SCARB2-213ENST00000638680 PLSCR2Q9NRY7 297 aa15.7■□□□□ 0.1
SCARB2-213ENST00000638680 GATAD1Q8WUU5 269 aa15.7■□□□□ 0.1
SCARB2-213ENST00000638680 MRPL13Q9BYD1 178 aaKnown RBP15.7■□□□□ 0.1
SCARB2-213ENST00000638680 ATAD5Q96QE3 1844 aa15.7■□□□□ 0.1
SCARB2-213ENST00000638680 ZNF729A6NN14 1252 aaPredicted RBP15.7■□□□□ 0.1
SCARB2-213ENST00000638680 NKX2-8O15522 239 aa15.7■□□□□ 0.1
SCARB2-213ENST00000638680 CA7P43166 264 aa15.7■□□□□ 0.1
SCARB2-213ENST00000638680 TTC32Q5I0X7 151 aa15.7■□□□□ 0.1
SCARB2-213ENST00000638680 UBE2L6O14933 153 aa15.7■□□□□ 0.1
SCARB2-213ENST00000638680 JOSD1Q15040 202 aaPredicted RBP15.7■□□□□ 0.1
SCARB2-213ENST00000638680 COL4A5P29400 1685 aa15.7■□□□□ 0.1
SCARB2-213ENST00000638680 CCDC88CQ9P219 2028 aa15.69■□□□□ 0.1
SCARB2-213ENST00000638680 SNAI2O43623 268 aa15.69■□□□□ 0.1
SCARB2-213ENST00000638680 RNF126Q9BV68 326 aa15.69■□□□□ 0.1
SCARB2-213ENST00000638680 TMEM160Q9NX00 188 aa15.69■□□□□ 0.1
SCARB2-213ENST00000638680 ZNF414Q96IQ9 312 aa15.69■□□□□ 0.1
SCARB2-213ENST00000638680 HOXB1P14653 301 aaPredicted RBP15.69■□□□□ 0.1
SCARB2-213ENST00000638680 UCP1P25874 307 aa15.69■□□□□ 0.1
SCARB2-213ENST00000638680 TRBV20OR9-2A0A075B6H5 130 aa15.68■□□□□ 0.1
SCARB2-213ENST00000638680 IGFBP2P18065 325 aa15.68■□□□□ 0.1
SCARB2-213ENST00000638680 OR9G1Q8NH87 305 aa15.68■□□□□ 0.1
SCARB2-213ENST00000638680 TMEM186Q96B77 213 aa15.68■□□□□ 0.1
SCARB2-213ENST00000638680 STRCP1A6NGW2 1772 aa15.68■□□□□ 0.1
SCARB2-213ENST00000638680 A0A1B0GTI1 187 aa15.68■□□□□ 0.1
SCARB2-213ENST00000638680 SYNGR3O43761 229 aa15.68■□□□□ 0.1
SCARB2-213ENST00000638680 UBR3Q6ZT12 1888 aa15.68■□□□□ 0.1
SCARB2-213ENST00000638680 PPIAL4CA0A0B4J2A2 164 aa15.68■□□□□ 0.1
SCARB2-213ENST00000638680 IL4P05112 153 aa15.68■□□□□ 0.1
SCARB2-213ENST00000638680 PPIAL4GP0DN37 164 aa15.68■□□□□ 0.1
SCARB2-213ENST00000638680 EMP1P54849 157 aa15.68■□□□□ 0.1
SCARB2-213ENST00000638680 SHISA5Q8N114 240 aa15.68■□□□□ 0.1
SCARB2-213ENST00000638680 COL5A3P25940 1745 aaPredicted RBP15.68■□□□□ 0.1
SCARB2-213ENST00000638680 SHANK3Q9BYB0 1731 aa15.68■□□□□ 0.1
SCARB2-213ENST00000638680 TBX6O95947 436 aaPredicted RBP15.68■□□□□ 0.1
SCARB2-213ENST00000638680 HIST1H1AQ02539 215 aaPredicted RBP15.68■□□□□ 0.1
SCARB2-213ENST00000638680 ZNRF1Q8ND25 227 aa15.68■□□□□ 0.1
SCARB2-213ENST00000638680 C17orf98A8MV24 154 aa15.67■□□□□ 0.1
SCARB2-213ENST00000638680 IGFBP3P17936 291 aaPredicted RBP15.67■□□□□ 0.1
SCARB2-213ENST00000638680 LINC00114Q6XXX2 140 aa15.67■□□□□ 0.1
SCARB2-213ENST00000638680 C12orf77C9JDV5 145 aa15.67■□□□□ 0.1
SCARB2-213ENST00000638680 C18orf15Q96N68 181 aa15.67■□□□□ 0.1
SCARB2-213ENST00000638680 TBR1Q16650 682 aa15.67■□□□□ 0.1
SCARB2-213ENST00000638680 TIAF1O95411 115 aa15.67■□□□□ 0.1
SCARB2-213ENST00000638680 GPX1P07203 203 aa15.67■□□□□ 0.1
SCARB2-213ENST00000638680 AICDAQ9GZX7 198 aa15.67■□□□□ 0.1
SCARB2-213ENST00000638680 BEX4Q9NWD9 120 aaPredicted RBP15.67■□□□□ 0.1
SCARB2-213ENST00000638680 TRAV8-6A0A0B4J262 113 aa15.67■□□□□ 0.1
SCARB2-213ENST00000638680 GPX4P36969 197 aaPredicted RBP15.67■□□□□ 0.1
SCARB2-213ENST00000638680 LY6G6FQ5SQ64 297 aa15.67■□□□□ 0.1
SCARB2-213ENST00000638680 COL11A1P12107 1806 aaPredicted RBP15.67■□□□□ 0.1
SCARB2-213ENST00000638680 SAP25Q8TEE9 199 aa15.66■□□□□ 0.1
SCARB2-213ENST00000638680 DICER1Q9UPY3 1922 aaKnown RBP15.66■□□□□ 0.1
SCARB2-213ENST00000638680 IGKV3D-11A0A0A0MRZ8 115 aa15.66■□□□□ 0.1
SCARB2-213ENST00000638680 FOXI3A8MTJ6 420 aaPredicted RBP15.66■□□□□ 0.1
SCARB2-213ENST00000638680 NDUFA2O43678 99 aa15.66■□□□□ 0.1
SCARB2-213ENST00000638680 ACSF3Q4G176 576 aaPredicted RBP15.66■□□□□ 0.1
SCARB2-213ENST00000638680 FAM19A2Q8N3H0 131 aa15.66■□□□□ 0.1
SCARB2-213ENST00000638680 TMEM171Q8WVE6 324 aa15.66■□□□□ 0.1
SCARB2-213ENST00000638680 TGFBR3LH3BV60 316 aa15.66■□□□□ 0.1
SCARB2-213ENST00000638680 APOHP02749 345 aaPredicted RBP15.66■□□□□ 0.1
SCARB2-213ENST00000638680 TUBA4BQ9H853 241 aa15.66■□□□□ 0.1
SCARB2-213ENST00000638680 A0A087WV48 116 aa15.66■□□□□ 0.1
SCARB2-213ENST00000638680 ICAM4Q14773 271 aa15.66■□□□□ 0.1
SCARB2-213ENST00000638680 SPSB2Q99619 263 aa15.66■□□□□ 0.1
SCARB2-213ENST00000638680 A0A1W2PQM1 296 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms