RNA–Protein interactions for RNA: ENST00000634760.1

SMARCA2-227, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 5,847 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-227ENST00000634760 SOX21Q9Y651 276 aaPredicted RBP17.85■□□□□ 0.45
SMARCA2-227ENST00000634760 OR10S1Q8NGN2 331 aa17.84■□□□□ 0.45
SMARCA2-227ENST00000634760 AUP1Q9Y679 476 aa17.84■□□□□ 0.45
SMARCA2-227ENST00000634760 SIGLEC12Q96PQ1 595 aa17.84■□□□□ 0.45
SMARCA2-227ENST00000634760 SRSF12Q8WXF0 261 aaKnown RBP17.84■□□□□ 0.45
SMARCA2-227ENST00000634760 LOC102723996A0A087X1L8 192 aa17.83■□□□□ 0.45
SMARCA2-227ENST00000634760 REPIN1Q9BWE0 567 aaKnown RBP17.83■□□□□ 0.45
SMARCA2-227ENST00000634760 GDF9O60383 454 aa17.83■□□□□ 0.45
SMARCA2-227ENST00000634760 PLAUP00749 431 aa17.83■□□□□ 0.45
SMARCA2-227ENST00000634760 RFPL3SP0C7P2 107 aa17.83■□□□□ 0.45
SMARCA2-227ENST00000634760 SNRPD3P62318 126 aaKnown RBP17.83■□□□□ 0.45
SMARCA2-227ENST00000634760 FDCSPQ8NFU4 85 aa17.83■□□□□ 0.45
SMARCA2-227ENST00000634760 A0A1B0GW15 77 aa17.83■□□□□ 0.44
SMARCA2-227ENST00000634760 PQLC2LA1A4F0 135 aa17.83■□□□□ 0.44
SMARCA2-227ENST00000634760 FBLL1A6NHQ2 334 aaKnown RBP17.83■□□□□ 0.44
SMARCA2-227ENST00000634760 PAPPA-AS1Q5QFB9 102 aa17.83■□□□□ 0.44
SMARCA2-227ENST00000634760 TGFBR3LH3BV60 316 aa17.83■□□□□ 0.44
SMARCA2-227ENST00000634760 ZNF324O75467 553 aaPredicted RBP17.83■□□□□ 0.44
SMARCA2-227ENST00000634760 LCN2P80188 198 aa17.83■□□□□ 0.44
SMARCA2-227ENST00000634760 ZNF502Q8TBZ5 544 aa17.83■□□□□ 0.44
SMARCA2-227ENST00000634760 H3BVH4 76 aa17.83■□□□□ 0.44
SMARCA2-227ENST00000634760 RNF224P0DH78 156 aa17.83■□□□□ 0.44
SMARCA2-227ENST00000634760 RNASEH2CQ8TDP1 164 aaKnown RBP17.83■□□□□ 0.44
SMARCA2-227ENST00000634760 C12orf77C9JDV5 145 aa17.82■□□□□ 0.44
SMARCA2-227ENST00000634760 CCL1P22362 96 aa17.82■□□□□ 0.44
SMARCA2-227ENST00000634760 ATP1A1-AS1Q5TC04 95 aa17.82■□□□□ 0.44
SMARCA2-227ENST00000634760 GPX4P36969 197 aaPredicted RBP17.82■□□□□ 0.44
SMARCA2-227ENST00000634760 TCTAP57738 103 aa17.82■□□□□ 0.44
SMARCA2-227ENST00000634760 ARF6P62330 175 aa17.82■□□□□ 0.44
SMARCA2-227ENST00000634760 HBBP68871 147 aa17.82■□□□□ 0.44
SMARCA2-227ENST00000634760 KBTBD11-OT1A0A1B0GTJ5 212 aa17.82■□□□□ 0.44
SMARCA2-227ENST00000634760 HLA-DRB1P01911 266 aa17.82■□□□□ 0.44
SMARCA2-227ENST00000634760 CECR9P0C854 216 aa17.82■□□□□ 0.44
SMARCA2-227ENST00000634760 FABP2P12104 132 aa17.82■□□□□ 0.44
SMARCA2-227ENST00000634760 FMC1Q96HJ9 113 aa17.82■□□□□ 0.44
SMARCA2-227ENST00000634760 RTBDNQ9BSG5 229 aaPredicted RBP17.82■□□□□ 0.44
SMARCA2-227ENST00000634760 A0A0G2JMZ2 1700 aa17.82■□□□□ 0.44
SMARCA2-227ENST00000634760 LRRC37A2A6NM11 1700 aa17.82■□□□□ 0.44
SMARCA2-227ENST00000634760 LNP1A1A4G5 178 aa17.82■□□□□ 0.44
SMARCA2-227ENST00000634760 IGHV2OR16-5A0A0B4J2B6 119 aa17.82■□□□□ 0.44
SMARCA2-227ENST00000634760 LINC00305Q7Z4B0 112 aa17.82■□□□□ 0.44
SMARCA2-227ENST00000634760 GPR82Q96P67 336 aa17.82■□□□□ 0.44
SMARCA2-227ENST00000634760 AICDAQ9GZX7 198 aa17.82■□□□□ 0.44
SMARCA2-227ENST00000634760 GPX1P07203 203 aa17.81■□□□□ 0.44
SMARCA2-227ENST00000634760 NPIPB3Q92617 1050 aa17.81■□□□□ 0.44
SMARCA2-227ENST00000634760 DUX5Q96PT3 197 aa17.81■□□□□ 0.44
SMARCA2-227ENST00000634760 PPP1R17O96001 155 aa17.81■□□□□ 0.44
SMARCA2-227ENST00000634760 LINC00271P0C7V0 271 aa17.81■□□□□ 0.44
SMARCA2-227ENST00000634760 CRYBA2P53672 197 aa17.81■□□□□ 0.44
SMARCA2-227ENST00000634760 SAMD13Q5VXD3 122 aa17.81■□□□□ 0.44
SMARCA2-227ENST00000634760 LGALS3P17931 250 aaKnown RBP17.81■□□□□ 0.44
SMARCA2-227ENST00000634760 ZP1P60852 638 aa17.81■□□□□ 0.44
SMARCA2-227ENST00000634760 JOSD1Q15040 202 aaPredicted RBP17.81■□□□□ 0.44
SMARCA2-227ENST00000634760 SMUG1Q53HV7 270 aa17.81■□□□□ 0.44
SMARCA2-227ENST00000634760 MPZP25189 248 aa17.81■□□□□ 0.44
SMARCA2-227ENST00000634760 ATP5J2P56134 94 aa17.81■□□□□ 0.44
SMARCA2-227ENST00000634760 DNLZQ5SXM8 178 aa17.81■□□□□ 0.44
SMARCA2-227ENST00000634760 CACNG8Q8WXS5 425 aa17.81■□□□□ 0.44
SMARCA2-227ENST00000634760 LEAP2Q969E1 77 aa17.81■□□□□ 0.44
SMARCA2-227ENST00000634760 SMIM12Q96EX1 92 aa17.81■□□□□ 0.44
SMARCA2-227ENST00000634760 MRPS16Q9Y3D3 137 aaKnown RBP17.81■□□□□ 0.44
SMARCA2-227ENST00000634760 ACSF3Q4G176 576 aaPredicted RBP17.8■□□□□ 0.44
SMARCA2-227ENST00000634760 SLC25A34Q6PIV7 304 aa17.8■□□□□ 0.44
SMARCA2-227ENST00000634760 LINC00312Q9Y6C7 94 aa17.8■□□□□ 0.44
SMARCA2-227ENST00000634760 EFNB1P98172 346 aa17.8■□□□□ 0.44
SMARCA2-227ENST00000634760 SSBP3Q9BWW4 388 aaPredicted RBP17.8■□□□□ 0.44
SMARCA2-227ENST00000634760 K7ERU9 68 aa17.8■□□□□ 0.44
SMARCA2-227ENST00000634760 EAF1Q96JC9 268 aaPredicted RBP17.8■□□□□ 0.44
SMARCA2-227ENST00000634760 ZNHIT1O43257 154 aa17.8■□□□□ 0.44
SMARCA2-227ENST00000634760 CEACAM1P13688 526 aa17.8■□□□□ 0.44
SMARCA2-227ENST00000634760 SRIP30626 198 aa17.8■□□□□ 0.44
SMARCA2-227ENST00000634760 TFPI2P48307 235 aa17.8■□□□□ 0.44
SMARCA2-227ENST00000634760 GTF3AQ92664 365 aaKnown RBP17.8■□□□□ 0.44
SMARCA2-227ENST00000634760 GFRA3O60609 400 aa17.8■□□□□ 0.44
SMARCA2-227ENST00000634760 DLX6P56179 175 aa17.8■□□□□ 0.44
SMARCA2-227ENST00000634760 TMEM190Q8WZ59 177 aa17.8■□□□□ 0.44
SMARCA2-227ENST00000634760 A0A087WWC5 75 aa17.79■□□□□ 0.44
SMARCA2-227ENST00000634760 MDKP21741 143 aaPredicted RBP17.79■□□□□ 0.44
SMARCA2-227ENST00000634760 C2orf83Q53S99 150 aa17.79■□□□□ 0.44
SMARCA2-227ENST00000634760 CENPWQ5EE01 88 aa17.79■□□□□ 0.44
SMARCA2-227ENST00000634760 CLDND2Q8NHS1 167 aa17.79■□□□□ 0.44
SMARCA2-227ENST00000634760 WDYHV1Q96HA8 205 aa17.79■□□□□ 0.44
SMARCA2-227ENST00000634760 RPL39P5Q59GN2 51 aa17.79■□□□□ 0.44
SMARCA2-227ENST00000634760 C18orf12Q96KH6 178 aa17.79■□□□□ 0.44
SMARCA2-227ENST00000634760 CIRBPQ14011 172 aaKnown RBP17.79■□□□□ 0.44
SMARCA2-227ENST00000634760 DPM3Q9P2X0 92 aa17.79■□□□□ 0.44
SMARCA2-227ENST00000634760 ZNF256Q9Y2P7 627 aaPredicted RBP17.79■□□□□ 0.44
SMARCA2-227ENST00000634760 PSMG4Q5JS54 123 aa17.79■□□□□ 0.44
SMARCA2-227ENST00000634760 ZNF385CQ66K41 422 aaPredicted RBP17.79■□□□□ 0.44
SMARCA2-227ENST00000634760 IGKV1D-43A0A0B4J1Z2 117 aa17.78■□□□□ 0.44
SMARCA2-227ENST00000634760 REG1AP05451 166 aa17.78■□□□□ 0.44
SMARCA2-227ENST00000634760 C1QL2Q7Z5L3 287 aa17.78■□□□□ 0.44
SMARCA2-227ENST00000634760 VKORC1L1Q8N0U8 176 aa17.78■□□□□ 0.44
SMARCA2-227ENST00000634760 RAMP1O60894 148 aa17.78■□□□□ 0.44
SMARCA2-227ENST00000634760 ADIPOQQ15848 244 aa17.78■□□□□ 0.44
SMARCA2-227ENST00000634760 IL36BQ9NZH7 164 aa17.78■□□□□ 0.44
SMARCA2-227ENST00000634760 A0A1B0GTI1 187 aa17.78■□□□□ 0.44
SMARCA2-227ENST00000634760 SHISA3A0PJX4 238 aa17.78■□□□□ 0.44
SMARCA2-227ENST00000634760 OR4A47Q6IF82 309 aa17.78■□□□□ 0.44
SMARCA2-227ENST00000634760 RBFOX2O43251 390 aaKnown RBP eCLIP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms