RNA–Protein interactions for RNA: ENST00000632629.1

NPHP3-ACAD11-202, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2

Gene NPHP3-ACAD11, Length 695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-202ENST00000632629 SLIT2O94813 1529 aa0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 TRBV24-1A0A075B6N3 115 aa0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 TMED7-TICAM2A0A0A6YYA0 188 aa0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 TRAV8-1A0A0A6YYK1 113 aa0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 IGKV1D-43A0A0B4J1Z2 117 aa0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 TRAV26-2A0A0B4J265 109 aa0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 OR4C46A6NHA9 309 aa0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 OVOL1O14753 267 aa0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 MRASO14807 208 aa0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 S1PR2O95136 353 aa0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 ZNF682O95780 498 aa0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 TRGV3P03979 118 aa0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 FABP1P07148 127 aa0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 OR4A8P0C604 315 aa0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 SCGB1C2P0DMR2 95 aa0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 FGF6P10767 208 aa0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 CRYBB3P26998 211 aa0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 G0S2P27469 103 aa0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 RPL5P46777 297 aaKnown RBP0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 CRYBA4P53673 196 aa0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 BSPH1Q075Z2 132 aa0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 PRDX4Q13162 271 aa0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 APOFQ13790 326 aa0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 POU6F1Q14863 301 aa0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 RSU1Q15404 277 aa0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 SNCBQ16143 134 aa0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 TMEM241Q24JQ0 296 aa0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 C12orf74Q32Q52 190 aa0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 MRPL51Q4U2R6 128 aaKnown RBP0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 TNFAIP8L3Q5GJ75 292 aa0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 C5orf46Q6UWT4 87 aa0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 SDIM1Q6ZPB5 146 aa0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 RASSF6Q6ZTQ3 369 aa0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 ATP5L2Q7Z4Y8 100 aa0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 PHF13Q86YI8 300 aaPredicted RBP0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 FER1L6-AS1Q8NA97 138 aa0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 CCDC112Q8NEF3 446 aa0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 OR4A5Q8NH83 315 aa0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 SCGB1C1Q8TD33 95 aa0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 NEK7Q8TDX7 302 aa0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 LMX1AQ8TE12 382 aa0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 TWIST2Q8WVJ9 160 aa0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 CYGBQ8WWM9 190 aa0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 DGCR14Q96DF8 476 aaKnown RBP0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 MS4A6EQ96DS6 147 aa0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 SLC25A44Q96H78 314 aaPredicted RBP0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 DIRAS2Q96HU8 199 aa0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 CCL13Q99616 98 aa0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 EBNA1BP2Q99848 306 aaKnown RBP0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 MARVELD1Q9BSK0 173 aa0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 PECRQ9BY49 303 aa0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 C20orf27Q9GZN8 174 aa0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 CENPHQ9H3R5 247 aa0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 TMEM106BQ9NUM4 274 aa0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 OR5V1Q9UGF6 321 aa0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 STOML2Q9UJZ1 356 aa0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 TIMM22Q9Y584 194 aa0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 PHLDA3Q9Y5J5 127 aa0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 NUP210Q8TEM1 1887 aaPredicted RBP0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 PLXNA4Q9HCM2 1894 aa0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 PTPRJQ12913 1337 aa0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 CRB1P82279 1406 aa0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 MIA2Q96PC5 1412 aa0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 NCOA3Q9Y6Q9 1424 aa0.81□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 KMT2BQ9UMN6 2715 aaPredicted RBP0.8□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 N4BP2Q86UW6 1770 aaPredicted RBP0.8□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 EML6Q6ZMW3 1958 aa0.8□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 DOCK4Q8N1I0 1966 aa0.8□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 A0A087WUU8 490 aa0.8□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 TRAV4A0A0B4J268 109 aa0.8□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 IGHV1-69-2A0A0G2JMI3 117 aa0.8□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 hADV38S2A0JD32 116 aa0.8□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 LINC00862A6NCI5 91 aa0.8□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 SIGLEC16A6NMB1 481 aa0.8□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 ZNF729A6NN14 1252 aaPredicted RBP0.8□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 C9JCJ5 164 aa0.8□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 H3BMM0 161 aa0.8□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 OR7C1O76099 320 aaPredicted RBP0.8□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 CPSF4O95639 269 aaKnown RBP0.8□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 GPR75O95800 540 aa0.8□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 FBP1P09467 338 aa0.8□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 CD79AP11912 226 aa0.8□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 CCL5P13501 91 aa0.8□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 ORM2P19652 201 aa0.8□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 NPPCP23582 126 aa0.8□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 NUDT2P50583 147 aa0.8□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 CDK9P50750 372 aaKnown RBP0.8□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 RAB25P57735 213 aa0.8□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 RPS20P60866 119 aaKnown RBP0.8□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 HSPE1P61604 102 aaKnown RBP0.8□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 TFAMQ00059 246 aaKnown RBP0.8□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 ALX1Q15699 326 aa0.8□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 CST6Q15828 149 aa0.8□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 LIN52Q52LA3 116 aa0.8□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 TMEM78Q5T7P6 136 aa0.8□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 HACD4Q5VWC8 232 aa0.8□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 LAIR2Q6ISS4 152 aa0.8□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 Q6ZQT7 251 aa0.8□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 CCDC121Q6ZUS5 278 aa0.8□□□□□ -2.28
NPHP3-ACAD11-202ENST00000632629 SCXQ7RTU7 201 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms