RNA–Protein interactions for RNA: ENST00000629045.1

SCARNA4-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-201ENST00000629045 SCAF11Q99590 1463 aaKnown RBP0.35□□□□□ -2.35
SCARNA4-201ENST00000629045 FLT4P35916 1363 aa0.35□□□□□ -2.35
SCARNA4-201ENST00000629045 COX7A2LO14548 114 aa0.35□□□□□ -2.35
SCARNA4-201ENST00000629045 GEMIN2O14893 280 aaKnown RBP0.35□□□□□ -2.35
SCARNA4-201ENST00000629045 APOMO95445 188 aa0.35□□□□□ -2.35
SCARNA4-201ENST00000629045 IL6P05231 212 aa0.35□□□□□ -2.35
SCARNA4-201ENST00000629045 UBBP0CG47 229 aa0.35□□□□□ -2.35
SCARNA4-201ENST00000629045 CCL5P13501 91 aa0.35□□□□□ -2.35
SCARNA4-201ENST00000629045 CD40LGP29965 261 aa0.35□□□□□ -2.35
SCARNA4-201ENST00000629045 HAAOP46952 286 aa0.35□□□□□ -2.35
SCARNA4-201ENST00000629045 HADHBP55084 474 aaKnown RBP0.35□□□□□ -2.35
SCARNA4-201ENST00000629045 SYCE1Q8N0S2 351 aa0.35□□□□□ -2.35
SCARNA4-201ENST00000629045 ZNF676Q8N7Q3 588 aa0.35□□□□□ -2.35
SCARNA4-201ENST00000629045 ASB13Q8WXK3 278 aa0.35□□□□□ -2.35
SCARNA4-201ENST00000629045 GNPNAT1Q96EK6 184 aaPredicted RBP0.35□□□□□ -2.35
SCARNA4-201ENST00000629045 PACRGQ96M98 296 aaPredicted RBP0.35□□□□□ -2.35
SCARNA4-201ENST00000629045 REG4Q9BYZ8 158 aa0.35□□□□□ -2.35
SCARNA4-201ENST00000629045 MS4A6AQ9H2W1 248 aa0.35□□□□□ -2.35
SCARNA4-201ENST00000629045 XAGE1AQ9HD64 81 aa0.35□□□□□ -2.35
SCARNA4-201ENST00000629045 HRASLSQ9HDD0 168 aa0.35□□□□□ -2.35
SCARNA4-201ENST00000629045 AHNAK2Q8IVF2 5795 aa0.34□□□□□ -2.35
SCARNA4-201ENST00000629045 TMEM213A2RRL7 107 aa0.34□□□□□ -2.36
SCARNA4-201ENST00000629045 GOLGA6L10A6NI86 522 aa0.34□□□□□ -2.36
SCARNA4-201ENST00000629045 SDCBPO00560 298 aaPredicted RBP0.34□□□□□ -2.36
SCARNA4-201ENST00000629045 NSA2O95478 260 aaKnown RBP0.34□□□□□ -2.36
SCARNA4-201ENST00000629045 MSMBP08118 114 aa0.34□□□□□ -2.36
SCARNA4-201ENST00000629045 HIST1H1CP16403 213 aaKnown RBP0.34□□□□□ -2.36
SCARNA4-201ENST00000629045 DDTP30046 118 aa0.34□□□□□ -2.36
SCARNA4-201ENST00000629045 RP1P56715 2156 aa0.34□□□□□ -2.36
SCARNA4-201ENST00000629045 C10orf55Q5SWW7 151 aa0.34□□□□□ -2.36
SCARNA4-201ENST00000629045 FAM27BQ5VT28 67 aa0.34□□□□□ -2.36
SCARNA4-201ENST00000629045 SDHAF4Q5VUM1 108 aa0.34□□□□□ -2.36
SCARNA4-201ENST00000629045 DNM1P34Q6PK57 102 aa0.34□□□□□ -2.36
SCARNA4-201ENST00000629045 SBSNQ6UWP8 590 aa0.34□□□□□ -2.36
SCARNA4-201ENST00000629045 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.34□□□□□ -2.36
SCARNA4-201ENST00000629045 GID4Q8IVV7 300 aa0.34□□□□□ -2.36
SCARNA4-201ENST00000629045 SLC22A24Q8N4F4 322 aa0.34□□□□□ -2.36
SCARNA4-201ENST00000629045 TBC1D19Q8N5T2 526 aa0.34□□□□□ -2.36
SCARNA4-201ENST00000629045 C12orf29Q8N999 325 aa0.34□□□□□ -2.36
SCARNA4-201ENST00000629045 OR2T27Q8NH04 317 aa0.34□□□□□ -2.36
SCARNA4-201ENST00000629045 HAVCR2Q8TDQ0 301 aa0.34□□□□□ -2.36
SCARNA4-201ENST00000629045 ERMAPQ96PL5 475 aaPredicted RBP0.34□□□□□ -2.36
SCARNA4-201ENST00000629045 SERPINI1Q99574 410 aa0.34□□□□□ -2.36
SCARNA4-201ENST00000629045 DERL2Q9GZP9 239 aa0.34□□□□□ -2.36
SCARNA4-201ENST00000629045 SPANXB1Q9NS25 103 aaPredicted RBP0.34□□□□□ -2.36
SCARNA4-201ENST00000629045 RIMS2Q9UQ26 1411 aa0.34□□□□□ -2.36
SCARNA4-201ENST00000629045 PRELID1Q9Y255 219 aa0.34□□□□□ -2.36
SCARNA4-201ENST00000629045 TIMM22Q9Y584 194 aa0.34□□□□□ -2.36
SCARNA4-201ENST00000629045 GMEB1Q9Y692 573 aa0.34□□□□□ -2.36
SCARNA4-201ENST00000629045 LHFPL6Q9Y693 200 aa0.34□□□□□ -2.36
SCARNA4-201ENST00000629045 CHD5Q8TDI0 1954 aa0.34□□□□□ -2.36
SCARNA4-201ENST00000629045 CHD2O14647 1828 aaKnown RBP0.34□□□□□ -2.36
SCARNA4-201ENST00000629045 THSD7AQ9UPZ6 1657 aa0.33□□□□□ -2.36
SCARNA4-201ENST00000629045 TONSLQ96HA7 1378 aa0.33□□□□□ -2.36
SCARNA4-201ENST00000629045 REREQ9P2R6 1566 aa0.33□□□□□ -2.36
SCARNA4-201ENST00000629045 SETD5Q9C0A6 1442 aa0.33□□□□□ -2.36
SCARNA4-201ENST00000629045 TRBV10-2A0A0K0K1G8 114 aa0.33□□□□□ -2.36
SCARNA4-201ENST00000629045 TINCRA0A1B0GVN0 87 aa0.33□□□□□ -2.36
SCARNA4-201ENST00000629045 TRPC5OSA6NMA1 111 aa0.33□□□□□ -2.36
SCARNA4-201ENST00000629045 TRAPPC2LH3BP13 241 aa0.33□□□□□ -2.36
SCARNA4-201ENST00000629045 LEPROTO15243 131 aa0.33□□□□□ -2.36
SCARNA4-201ENST00000629045 UGT2B7P16662 529 aa0.33□□□□□ -2.36
SCARNA4-201ENST00000629045 CSN1S1P47710 185 aa0.33□□□□□ -2.36
SCARNA4-201ENST00000629045 POLR2GP62487 172 aaKnown RBP eCLIP0.33□□□□□ -2.36
SCARNA4-201ENST00000629045 CDK10Q15131 360 aa0.33□□□□□ -2.36
SCARNA4-201ENST00000629045 NDUFA5Q16718 116 aa0.33□□□□□ -2.36
SCARNA4-201ENST00000629045 SSX8Q7RTT4 187 aa0.33□□□□□ -2.36
SCARNA4-201ENST00000629045 DHFR2Q86XF0 187 aa0.33□□□□□ -2.36
SCARNA4-201ENST00000629045 CD302Q8IX05 232 aa0.33□□□□□ -2.36
SCARNA4-201ENST00000629045 UBL4BQ8N7F7 174 aa0.33□□□□□ -2.36
SCARNA4-201ENST00000629045 SGMS2Q8NHU3 365 aa0.33□□□□□ -2.36
SCARNA4-201ENST00000629045 MRPL57Q9BQC6 102 aaKnown RBP0.33□□□□□ -2.36
SCARNA4-201ENST00000629045 DCUN1D5Q9BTE7 237 aa0.33□□□□□ -2.36
SCARNA4-201ENST00000629045 BBS2Q9BXC9 721 aa0.33□□□□□ -2.36
SCARNA4-201ENST00000629045 TRABDQ9H4I3 376 aa0.33□□□□□ -2.36
SCARNA4-201ENST00000629045 CXorf21Q9HAI6 301 aa0.33□□□□□ -2.36
SCARNA4-201ENST00000629045 GPR84Q9NQS5 396 aa0.33□□□□□ -2.36
SCARNA4-201ENST00000629045 EURLQ9NYK6 297 aa0.33□□□□□ -2.36
SCARNA4-201ENST00000629045 CACNA1BQ00975 2339 aa0.33□□□□□ -2.36
SCARNA4-201ENST00000629045 BRWD1Q9NSI6 2320 aa0.32□□□□□ -2.36
SCARNA4-201ENST00000629045 TRAV14DV4A0A0A6YYC5 116 aa0.32□□□□□ -2.36
SCARNA4-201ENST00000629045 TMEM212A6NML5 194 aa0.32□□□□□ -2.36
SCARNA4-201ENST00000629045 ITGB1BP1O14713 200 aa0.32□□□□□ -2.36
SCARNA4-201ENST00000629045 SLC22A1O15245 554 aa0.32□□□□□ -2.36
SCARNA4-201ENST00000629045 HPGDSO60760 199 aa0.32□□□□□ -2.36
SCARNA4-201ENST00000629045 PMP2P02689 132 aa0.32□□□□□ -2.36
SCARNA4-201ENST00000629045 SULT1A3P0DMM9 295 aa0.32□□□□□ -2.36
SCARNA4-201ENST00000629045 SULT1A4P0DMN0 295 aa0.32□□□□□ -2.36
SCARNA4-201ENST00000629045 RAB13P51153 203 aa0.32□□□□□ -2.36
SCARNA4-201ENST00000629045 CXCR4P61073 352 aa0.32□□□□□ -2.36
SCARNA4-201ENST00000629045 TNFAIP8L3Q5GJ75 292 aa0.32□□□□□ -2.36
SCARNA4-201ENST00000629045 FAM78BQ5VT40 261 aa0.32□□□□□ -2.36
SCARNA4-201ENST00000629045 HIST2H3AQ71DI3 136 aa0.32□□□□□ -2.36
SCARNA4-201ENST00000629045 FAM19A5Q7Z5A7 132 aaPredicted RBP0.32□□□□□ -2.36
SCARNA4-201ENST00000629045 TMEM251Q8N6I4 163 aa0.32□□□□□ -2.36
SCARNA4-201ENST00000629045 ZNF565Q8N9K5 539 aa0.32□□□□□ -2.36
SCARNA4-201ENST00000629045 OR7G1Q8NGA0 311 aa0.32□□□□□ -2.36
SCARNA4-201ENST00000629045 OR1M1Q8NGA1 313 aa0.32□□□□□ -2.36
SCARNA4-201ENST00000629045 OR5B17Q8NGF7 314 aa0.32□□□□□ -2.36
SCARNA4-201ENST00000629045 AQP3Q92482 292 aa0.32□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms