RNA–Protein interactions for RNA: ENST00000628509.1

FOXCUT-201, FOXC1 upstream transcript, humanhuman

TSL 3 BASIC

Gene FOXCUT, Length 333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXCUT-201ENST00000628509 UPK2O00526 184 aa8.19□□□□□ -1.1
FOXCUT-201ENST00000628509 NBR2O15453 112 aa8.19□□□□□ -1.1
FOXCUT-201ENST00000628509 ARPC5O15511 151 aa8.19□□□□□ -1.1
FOXCUT-201ENST00000628509 TSC22D2O75157 780 aa8.19□□□□□ -1.1
FOXCUT-201ENST00000628509 PITX3O75364 302 aa8.19□□□□□ -1.1
FOXCUT-201ENST00000628509 VENTXO95231 258 aa8.19□□□□□ -1.1
FOXCUT-201ENST00000628509 IGKV1-39P01597 117 aa8.19□□□□□ -1.1
FOXCUT-201ENST00000628509 MBPP02686 304 aaPredicted RBP8.19□□□□□ -1.1
FOXCUT-201ENST00000628509 IGKV1D-39P04432 117 aa8.19□□□□□ -1.1
FOXCUT-201ENST00000628509 LYL1P12980 280 aa8.19□□□□□ -1.1
FOXCUT-201ENST00000628509 HOXA1P49639 335 aaPredicted RBP8.19□□□□□ -1.1
FOXCUT-201ENST00000628509 HSPE1P61604 102 aaKnown RBP8.19□□□□□ -1.1
FOXCUT-201ENST00000628509 RAB11AP62491 216 aa8.19□□□□□ -1.1
FOXCUT-201ENST00000628509 ERHP84090 104 aaKnown RBP8.19□□□□□ -1.1
FOXCUT-201ENST00000628509 IL15RAQ13261 267 aa8.19□□□□□ -1.1
FOXCUT-201ENST00000628509 MMDQ15546 238 aa8.19□□□□□ -1.1
FOXCUT-201ENST00000628509 C2orf68Q2NKX9 166 aa8.19□□□□□ -1.1
FOXCUT-201ENST00000628509 HIST2H2BCQ6DN03 193 aa8.19□□□□□ -1.1
FOXCUT-201ENST00000628509 EIF5AL1Q6IS14 154 aaKnown RBP8.19□□□□□ -1.1
FOXCUT-201ENST00000628509 SSX9Q7RTT3 188 aa8.19□□□□□ -1.1
FOXCUT-201ENST00000628509 C16orf82Q7Z2V1 217 aa8.19□□□□□ -1.1
FOXCUT-201ENST00000628509 PUSL1Q8N0Z8 303 aaKnown RBP8.19□□□□□ -1.1
FOXCUT-201ENST00000628509 WDR89Q96FK6 387 aaPredicted RBP8.19□□□□□ -1.1
FOXCUT-201ENST00000628509 SMIM8Q96KF7 97 aa8.19□□□□□ -1.1
FOXCUT-201ENST00000628509 SRSF8Q9BRL6 282 aaKnown RBP8.19□□□□□ -1.1
FOXCUT-201ENST00000628509 MEGF9Q9H1U4 602 aa8.19□□□□□ -1.1
FOXCUT-201ENST00000628509 PLEKHA3Q9HB20 300 aa8.19□□□□□ -1.1
FOXCUT-201ENST00000628509 MBD2Q9UBB5 411 aa8.19□□□□□ -1.1
FOXCUT-201ENST00000628509 U3KQ87 197 aa8.19□□□□□ -1.1
FOXCUT-201ENST00000628509 BORCS7-ASMTA0A0B4J1R7 106 aa8.18□□□□□ -1.1
FOXCUT-201ENST00000628509 A0A1W2PRD5 423 aa8.18□□□□□ -1.1
FOXCUT-201ENST00000628509 A0A1W2PRF3 423 aa8.18□□□□□ -1.1
FOXCUT-201ENST00000628509 A0A1W2PRM7 423 aa8.18□□□□□ -1.1
FOXCUT-201ENST00000628509 FAM181BA6NEQ2 426 aa8.18□□□□□ -1.1
FOXCUT-201ENST00000628509 SSSCA1O60232 199 aa8.18□□□□□ -1.1
FOXCUT-201ENST00000628509 IGKV1D-33P01593 117 aa8.18□□□□□ -1.1
FOXCUT-201ENST00000628509 IGKV1-33P01594 117 aa8.18□□□□□ -1.1
FOXCUT-201ENST00000628509 IGKV1-16P04430 117 aa8.18□□□□□ -1.1
FOXCUT-201ENST00000628509 P0C879 139 aa8.18□□□□□ -1.1
FOXCUT-201ENST00000628509 SAA1P0DJI8 122 aaPredicted RBP8.18□□□□□ -1.1
FOXCUT-201ENST00000628509 SNCAP37840 140 aa8.18□□□□□ -1.1
FOXCUT-201ENST00000628509 CAV2P51636 162 aa8.18□□□□□ -1.1
FOXCUT-201ENST00000628509 EBI3Q14213 229 aa8.18□□□□□ -1.1
FOXCUT-201ENST00000628509 LRRC75BQ2VPJ9 315 aa8.18□□□□□ -1.1
FOXCUT-201ENST00000628509 AARDQ4LEZ3 155 aa8.18□□□□□ -1.1
FOXCUT-201ENST00000628509 PDLIM3Q53GG5 364 aaPredicted RBP8.18□□□□□ -1.1
FOXCUT-201ENST00000628509 RBMS3Q6XE24 437 aaKnown RBP8.18□□□□□ -1.1
FOXCUT-201ENST00000628509 LHFPL4Q7Z7J7 247 aa8.18□□□□□ -1.1
FOXCUT-201ENST00000628509 PPP1R27Q86WC6 154 aa8.18□□□□□ -1.1
FOXCUT-201ENST00000628509 PDZD9Q8IXQ8 264 aa8.18□□□□□ -1.1
FOXCUT-201ENST00000628509 WFDC11Q8NEX6 87 aa8.18□□□□□ -1.1
FOXCUT-201ENST00000628509 NPBQ8NG41 125 aa8.18□□□□□ -1.1
FOXCUT-201ENST00000628509 OR1L6Q8NGR2 347 aa8.18□□□□□ -1.1
FOXCUT-201ENST00000628509 OR5R1Q8NH85 324 aa8.18□□□□□ -1.1
FOXCUT-201ENST00000628509 DTD1Q8TEA8 209 aa8.18□□□□□ -1.1
FOXCUT-201ENST00000628509 PINX1Q96BK5 328 aaKnown RBP8.18□□□□□ -1.1
FOXCUT-201ENST00000628509 AQP10Q96PS8 301 aa8.18□□□□□ -1.1
FOXCUT-201ENST00000628509 RASL11BQ9BPW5 248 aa8.18□□□□□ -1.1
FOXCUT-201ENST00000628509 HEYLQ9NQ87 328 aaPredicted RBP8.18□□□□□ -1.1
FOXCUT-201ENST00000628509 TMEM14BQ9NUH8 114 aa8.18□□□□□ -1.1
FOXCUT-201ENST00000628509 PSENENQ9NZ42 101 aa8.18□□□□□ -1.1
FOXCUT-201ENST00000628509 ZNRD1Q9P1U0 126 aa8.18□□□□□ -1.1
FOXCUT-201ENST00000628509 METTL1Q9UBP6 276 aaKnown RBP8.18□□□□□ -1.1
FOXCUT-201ENST00000628509 TNFSF18Q9UNG2 199 aa8.18□□□□□ -1.1
FOXCUT-201ENST00000628509 RCL1Q9Y2P8 373 aaKnown RBP8.18□□□□□ -1.1
FOXCUT-201ENST00000628509 STRAPQ9Y3F4 350 aaKnown RBP8.18□□□□□ -1.1
FOXCUT-201ENST00000628509 HSPB11Q9Y547 144 aa8.18□□□□□ -1.1
FOXCUT-201ENST00000628509 OR51B2Q9Y5P1 312 aa8.18□□□□□ -1.1
FOXCUT-201ENST00000628509 ANKRD17O75179 2603 aaKnown RBP8.18□□□□□ -1.1
FOXCUT-201ENST00000628509 NCBP2LA6PVI3 153 aaKnown RBP8.17□□□□□ -1.1
FOXCUT-201ENST00000628509 MPTX1A8MV57 137 aa8.17□□□□□ -1.1
FOXCUT-201ENST00000628509 BOLA2-SMG1P6H3BVE0 249 aa8.17□□□□□ -1.1
FOXCUT-201ENST00000628509 RRHO14718 337 aa8.17□□□□□ -1.1
FOXCUT-201ENST00000628509 SLC25A17O43808 307 aa8.17□□□□□ -1.1
FOXCUT-201ENST00000628509 CD5LO43866 347 aa8.17□□□□□ -1.1
FOXCUT-201ENST00000628509 CHST1O43916 411 aa8.17□□□□□ -1.1
FOXCUT-201ENST00000628509 DFFBO76075 338 aa8.17□□□□□ -1.1
FOXCUT-201ENST00000628509 FOSL1P15407 271 aa8.17□□□□□ -1.1
FOXCUT-201ENST00000628509 RPL12P30050 165 aaKnown RBP8.17□□□□□ -1.1
FOXCUT-201ENST00000628509 S100A11P31949 105 aa8.17□□□□□ -1.1
FOXCUT-201ENST00000628509 SRP14P37108 136 aaKnown RBP8.17□□□□□ -1.1
FOXCUT-201ENST00000628509 HTR2BP41595 481 aa8.17□□□□□ -1.1
FOXCUT-201ENST00000628509 BRWD1-AS2P59051 145 aa8.17□□□□□ -1.1
FOXCUT-201ENST00000628509 RELBQ01201 579 aa8.17□□□□□ -1.1
FOXCUT-201ENST00000628509 ZNF266Q14584 549 aa8.17□□□□□ -1.1
FOXCUT-201ENST00000628509 UTF1Q5T230 341 aa8.17□□□□□ -1.1
FOXCUT-201ENST00000628509 C9orf139Q6ZV77 190 aa8.17□□□□□ -1.1
FOXCUT-201ENST00000628509 OR2C3Q8N628 320 aa8.17□□□□□ -1.1
FOXCUT-201ENST00000628509 EAF1Q96JC9 268 aaPredicted RBP8.17□□□□□ -1.1
FOXCUT-201ENST00000628509 TMEM68Q96MH6 324 aa8.17□□□□□ -1.1
FOXCUT-201ENST00000628509 GON7Q9BXV9 100 aa8.17□□□□□ -1.1
FOXCUT-201ENST00000628509 ARL6Q9H0F7 186 aa8.17□□□□□ -1.1
FOXCUT-201ENST00000628509 LYRM2Q9NU23 88 aaPredicted RBP8.17□□□□□ -1.1
FOXCUT-201ENST00000628509 TMEM160Q9NX00 188 aa8.17□□□□□ -1.1
FOXCUT-201ENST00000628509 HRNRQ86YZ3 2850 aaPredicted RBP8.17□□□□□ -1.1
FOXCUT-201ENST00000628509 SPG11Q96JI7 2443 aa8.17□□□□□ -1.1
FOXCUT-201ENST00000628509 IGHV3-72A0A0B4J1Y9 119 aa8.16□□□□□ -1.1
FOXCUT-201ENST00000628509 CORTO00230 105 aa8.16□□□□□ -1.1
FOXCUT-201ENST00000628509 SMAD7O15105 426 aaKnown RBP8.16□□□□□ -1.1
FOXCUT-201ENST00000628509 FGF16O43320 207 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms