RNA–Protein interactions for RNA: ENST00000628347.1

SOX2-OT-247, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 445 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-247ENST00000628347 OR2A7Q96R45 310 aa9.44□□□□□ -0.9
SOX2-OT-247ENST00000628347 DCUN1D5Q9BTE7 237 aa9.44□□□□□ -0.9
SOX2-OT-247ENST00000628347 YTHDF1Q9BYJ9 559 aaKnown RBP9.44□□□□□ -0.9
SOX2-OT-247ENST00000628347 BIRC6Q9NR09 4857 aa9.43□□□□□ -0.9
SOX2-OT-247ENST00000628347 HYDINQ4G0P3 5121 aa9.43□□□□□ -0.9
SOX2-OT-247ENST00000628347 EPPK1P58107 5090 aaKnown RBP9.43□□□□□ -0.9
SOX2-OT-247ENST00000628347 LCE6AA0A183 80 aa9.43□□□□□ -0.9
SOX2-OT-247ENST00000628347 SMIM30A4D0T7 59 aa9.43□□□□□ -0.9
SOX2-OT-247ENST00000628347 IFNA6P05013 189 aa9.43□□□□□ -0.9
SOX2-OT-247ENST00000628347 CRYGCP07315 174 aa9.43□□□□□ -0.9
SOX2-OT-247ENST00000628347 IL6RP08887 468 aaPredicted RBP9.43□□□□□ -0.9
SOX2-OT-247ENST00000628347 ZNF735P0CB33 412 aa9.43□□□□□ -0.9
SOX2-OT-247ENST00000628347 PSMB9P28065 219 aa9.43□□□□□ -0.9
SOX2-OT-247ENST00000628347 KIR2DS2P43631 304 aa9.43□□□□□ -0.9
SOX2-OT-247ENST00000628347 RPL27AP46776 148 aaKnown RBP9.43□□□□□ -0.9
SOX2-OT-247ENST00000628347 BRWD1-AS2P59051 145 aa9.43□□□□□ -0.9
SOX2-OT-247ENST00000628347 C15orf32Q32M92 178 aa9.43□□□□□ -0.9
SOX2-OT-247ENST00000628347 MFSD4AQ8N468 514 aa9.43□□□□□ -0.9
SOX2-OT-247ENST00000628347 LGALS14Q8TCE9 139 aa9.43□□□□□ -0.9
SOX2-OT-247ENST00000628347 TCTEX1D2Q8WW35 142 aa9.43□□□□□ -0.9
SOX2-OT-247ENST00000628347 TUBA4BQ9H853 241 aa9.43□□□□□ -0.9
SOX2-OT-247ENST00000628347 SLC2A9Q9NRM0 540 aa9.43□□□□□ -0.9
SOX2-OT-247ENST00000628347 RHBDL2Q9NX52 303 aa9.43□□□□□ -0.9
SOX2-OT-247ENST00000628347 DAPK2Q9UIK4 370 aa9.43□□□□□ -0.9
SOX2-OT-247ENST00000628347 SSR3Q9UNL2 185 aa9.43□□□□□ -0.9
SOX2-OT-247ENST00000628347 RRP15Q9Y3B9 282 aaKnown RBP9.43□□□□□ -0.9
SOX2-OT-247ENST00000628347 HMX3A6NHT5 357 aa9.42□□□□□ -0.9
SOX2-OT-247ENST00000628347 ZNF785A8K8V0 405 aa9.42□□□□□ -0.9
SOX2-OT-247ENST00000628347 LGALS9O00182 355 aa9.42□□□□□ -0.9
SOX2-OT-247ENST00000628347 GGCTO75223 188 aaKnown RBP9.42□□□□□ -0.9
SOX2-OT-247ENST00000628347 OR2J3O76001 311 aa9.42□□□□□ -0.9
SOX2-OT-247ENST00000628347 CD300EQ496F6 205 aaPredicted RBP9.42□□□□□ -0.9
SOX2-OT-247ENST00000628347 OR2B11Q5JQS5 317 aa9.42□□□□□ -0.9
SOX2-OT-247ENST00000628347 VKORC1L1Q8N0U8 176 aa9.42□□□□□ -0.9
SOX2-OT-247ENST00000628347 ZBTB34Q8NCN2 500 aa9.42□□□□□ -0.9
SOX2-OT-247ENST00000628347 FANCD2OSQ96PS1 177 aa9.42□□□□□ -0.9
SOX2-OT-247ENST00000628347 FYTTD1Q96QD9 318 aaKnown RBP9.42□□□□□ -0.9
SOX2-OT-247ENST00000628347 ZC4H2Q9NQZ6 224 aa9.42□□□□□ -0.9
SOX2-OT-247ENST00000628347 TECRQ9NZ01 308 aaKnown RBP9.42□□□□□ -0.9
SOX2-OT-247ENST00000628347 ETV7Q9Y603 341 aa9.42□□□□□ -0.9
SOX2-OT-247ENST00000628347 A0A0A6YYH2 397 aa9.41□□□□□ -0.9
SOX2-OT-247ENST00000628347 A0A1B0GW64 132 aa9.41□□□□□ -0.9
SOX2-OT-247ENST00000628347 A6NJ64 397 aa9.41□□□□□ -0.9
SOX2-OT-247ENST00000628347 C2orf70A6NJV1 201 aa9.41□□□□□ -0.9
SOX2-OT-247ENST00000628347 E7EUB6 86 aa9.41□□□□□ -0.9
SOX2-OT-247ENST00000628347 HRASP01112 189 aa9.41□□□□□ -0.9
SOX2-OT-247ENST00000628347 CTRB1P17538 263 aa9.41□□□□□ -0.9
SOX2-OT-247ENST00000628347 CD81P60033 236 aa9.41□□□□□ -0.9
SOX2-OT-247ENST00000628347 DEFB114Q30KQ6 69 aa9.41□□□□□ -0.9
SOX2-OT-247ENST00000628347 ZFAND6Q6FIF0 208 aa9.41□□□□□ -0.9
SOX2-OT-247ENST00000628347 CTRB2Q6GPI1 263 aa9.41□□□□□ -0.9
SOX2-OT-247ENST00000628347 GPHB5Q86YW7 130 aa9.41□□□□□ -0.9
SOX2-OT-247ENST00000628347 BEST4Q8NFU0 473 aa9.41□□□□□ -0.9
SOX2-OT-247ENST00000628347 OR4A5Q8NH83 315 aa9.41□□□□□ -0.9
SOX2-OT-247ENST00000628347 NEURL2Q9BR09 285 aa9.41□□□□□ -0.9
SOX2-OT-247ENST00000628347 AIFM2Q9BRQ8 373 aa9.41□□□□□ -0.9
SOX2-OT-247ENST00000628347 SLC2A8Q9NY64 477 aa9.41□□□□□ -0.9
SOX2-OT-247ENST00000628347 BET1LQ9NYM9 111 aa9.41□□□□□ -0.9
SOX2-OT-247ENST00000628347 FBXL7Q9UJT9 491 aa9.41□□□□□ -0.9
SOX2-OT-247ENST00000628347 SPATA2Q9UM82 520 aa9.41□□□□□ -0.9
SOX2-OT-247ENST00000628347 CEPT1Q9Y6K0 416 aa9.41□□□□□ -0.9
SOX2-OT-247ENST00000628347 DPPA5A6NC42 116 aa9.4□□□□□ -0.9
SOX2-OT-247ENST00000628347 PPP5D1E7EU14 171 aa9.4□□□□□ -0.9
SOX2-OT-247ENST00000628347 RBFOX2O43251 390 aaKnown RBP eCLIP9.4□□□□□ -0.9
SOX2-OT-247ENST00000628347 TMEM127O75204 238 aa9.4□□□□□ -0.9
SOX2-OT-247ENST00000628347 TPPPO94811 219 aa9.4□□□□□ -0.9
SOX2-OT-247ENST00000628347 DHFRP00374 187 aa9.4□□□□□ -0.9
SOX2-OT-247ENST00000628347 FOLR2P14207 255 aa9.4□□□□□ -0.9
SOX2-OT-247ENST00000628347 HIST1H1BP16401 226 aaKnown RBP9.4□□□□□ -0.9
SOX2-OT-247ENST00000628347 PSMB6P28072 239 aa9.4□□□□□ -0.9
SOX2-OT-247ENST00000628347 SDC2P34741 201 aa9.4□□□□□ -0.9
SOX2-OT-247ENST00000628347 ARPC4P59998 168 aa9.4□□□□□ -0.9
SOX2-OT-247ENST00000628347 RPL8P62917 257 aaKnown RBP9.4□□□□□ -0.9
SOX2-OT-247ENST00000628347 HOGA1Q86XE5 327 aa9.4□□□□□ -0.9
SOX2-OT-247ENST00000628347 DYNLRB2Q8TF09 96 aa9.4□□□□□ -0.9
SOX2-OT-247ENST00000628347 SLC25A38Q96DW6 304 aa9.4□□□□□ -0.9
SOX2-OT-247ENST00000628347 HIPK2Q9H2X6 1198 aa9.4□□□□□ -0.9
SOX2-OT-247ENST00000628347 Q9H521 79 aa9.4□□□□□ -0.9
SOX2-OT-247ENST00000628347 TAS2R8Q9NYW2 309 aa9.4□□□□□ -0.9
SOX2-OT-247ENST00000628347 TRAV18A0A075B6X5 111 aa9.39□□□□□ -0.91
SOX2-OT-247ENST00000628347 A8MWP6 167 aa9.39□□□□□ -0.91
SOX2-OT-247ENST00000628347 NDUFB8O95169 186 aa9.39□□□□□ -0.91
SOX2-OT-247ENST00000628347 OR2C1O95371 312 aa9.39□□□□□ -0.91
SOX2-OT-247ENST00000628347 FGF2P09038 288 aa9.39□□□□□ -0.91
SOX2-OT-247ENST00000628347 CLEC2LP0C7M8 214 aa9.39□□□□□ -0.91
SOX2-OT-247ENST00000628347 HLA-GP17693 338 aa9.39□□□□□ -0.91
SOX2-OT-247ENST00000628347 FCGR2CP31995 323 aa9.39□□□□□ -0.91
SOX2-OT-247ENST00000628347 POU2AF1Q16633 256 aa9.39□□□□□ -0.91
SOX2-OT-247ENST00000628347 TIMM50Q3ZCQ8 353 aa9.39□□□□□ -0.91
SOX2-OT-247ENST00000628347 ZNF773Q6PK81 442 aa9.39□□□□□ -0.91
SOX2-OT-247ENST00000628347 C19orf35Q6ZS72 473 aa9.39□□□□□ -0.91
SOX2-OT-247ENST00000628347 GVQW1Q8N7I0 195 aa9.39□□□□□ -0.91
SOX2-OT-247ENST00000628347 OR13F1Q8NGS4 319 aa9.39□□□□□ -0.91
SOX2-OT-247ENST00000628347 OR5H6Q8NGV6 325 aa9.39□□□□□ -0.91
SOX2-OT-247ENST00000628347 SECTM1Q8WVN6 248 aa9.39□□□□□ -0.91
SOX2-OT-247ENST00000628347 EEF1AKMT3Q96AZ1 226 aa9.39□□□□□ -0.91
SOX2-OT-247ENST00000628347 CCDC140Q96MF4 163 aa9.39□□□□□ -0.91
SOX2-OT-247ENST00000628347 PLEKHA3Q9HB20 300 aa9.39□□□□□ -0.91
SOX2-OT-247ENST00000628347 CCL28Q9NRJ3 127 aa9.39□□□□□ -0.91
SOX2-OT-247ENST00000628347 IGLV11-55A0A075B6I3 123 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms