RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 LRP11Q86VZ4 500 aa14.65□□□□□ -0.06
PCF11-207ENST00000624931 LURAP1Q96LR2 239 aa14.65□□□□□ -0.06
PCF11-207ENST00000624931 ZNF488Q96MN9 340 aa14.65□□□□□ -0.06
PCF11-207ENST00000624931 DIDO1Q9BTC0 2240 aaKnown RBP14.65□□□□□ -0.06
PCF11-207ENST00000624931 IGHV3-64DA0A0J9YX35 117 aa14.64□□□□□ -0.07
PCF11-207ENST00000624931 DPRXA6NFQ7 191 aa14.64□□□□□ -0.07
PCF11-207ENST00000624931 C3orf80F5H4A9 247 aa14.64□□□□□ -0.07
PCF11-207ENST00000624931 TMPRSS2O15393 492 aa14.64□□□□□ -0.07
PCF11-207ENST00000624931 IGKV1D-33P01593 117 aa14.64□□□□□ -0.07
PCF11-207ENST00000624931 IGKV1-33P01594 117 aa14.64□□□□□ -0.07
PCF11-207ENST00000624931 ZNF664Q8N3J9 261 aa14.64□□□□□ -0.07
PCF11-207ENST00000624931 RAB1CQ92928 201 aa14.64□□□□□ -0.07
PCF11-207ENST00000624931 PCGF1Q9BSM1 259 aa14.64□□□□□ -0.07
PCF11-207ENST00000624931 ZFYVE26Q68DK2 2539 aa14.64□□□□□ -0.07
PCF11-207ENST00000624931 CFAP46Q8IYW2 2715 aa14.64□□□□□ -0.07
PCF11-207ENST00000624931 PMS2P5A8MQ11 134 aa14.63□□□□□ -0.07
PCF11-207ENST00000624931 IQCF6A8MYZ5 107 aa14.63□□□□□ -0.07
PCF11-207ENST00000624931 GZMHP20718 246 aa14.63□□□□□ -0.07
PCF11-207ENST00000624931 SPCS3P61009 180 aa14.63□□□□□ -0.07
PCF11-207ENST00000624931 LINC01560Q8TB33 94 aa14.63□□□□□ -0.07
PCF11-207ENST00000624931 HIVEP3Q5T1R4 2406 aa14.63□□□□□ -0.07
PCF11-207ENST00000624931 RELNP78509 3460 aa14.63□□□□□ -0.07
PCF11-207ENST00000624931 TMEM30CPA0ZSE6 113 aa14.63□□□□□ -0.07
PCF11-207ENST00000624931 TMEM210A6NLX4 147 aa14.63□□□□□ -0.07
PCF11-207ENST00000624931 MLNRO43193 412 aa14.63□□□□□ -0.07
PCF11-207ENST00000624931 TIMM8AO60220 97 aaPredicted RBP14.63□□□□□ -0.07
PCF11-207ENST00000624931 CLDN14O95500 239 aa14.63□□□□□ -0.07
PCF11-207ENST00000624931 CNN1P51911 297 aaKnown RBP14.63□□□□□ -0.07
PCF11-207ENST00000624931 BSPH1Q075Z2 132 aa14.63□□□□□ -0.07
PCF11-207ENST00000624931 Q6ZR03 302 aa14.63□□□□□ -0.07
PCF11-207ENST00000624931 WDR86Q86TI4 376 aa14.63□□□□□ -0.07
PCF11-207ENST00000624931 RNASE6Q93091 150 aaKnown RBP14.63□□□□□ -0.07
PCF11-207ENST00000624931 GALMQ96C23 342 aa14.63□□□□□ -0.07
PCF11-207ENST00000624931 SLC25A22Q9H936 323 aa14.63□□□□□ -0.07
PCF11-207ENST00000624931 A0A1W2PPQ1 181 aa14.62□□□□□ -0.07
PCF11-207ENST00000624931 SIRPB1O00241 398 aa14.62□□□□□ -0.07
PCF11-207ENST00000624931 CD55P08174 381 aa14.62□□□□□ -0.07
PCF11-207ENST00000624931 MDKP21741 143 aaPredicted RBP14.62□□□□□ -0.07
PCF11-207ENST00000624931 RPP30P78346 268 aaKnown RBP14.62□□□□□ -0.07
PCF11-207ENST00000624931 FOXL1Q12952 345 aa14.62□□□□□ -0.07
PCF11-207ENST00000624931 ZNF718Q3SXZ3 478 aa14.62□□□□□ -0.07
PCF11-207ENST00000624931 FBXL19-AS1Q494R0 122 aa14.62□□□□□ -0.07
PCF11-207ENST00000624931 MRPL52Q86TS9 123 aaKnown RBP14.62□□□□□ -0.07
PCF11-207ENST00000624931 NECAP1Q8NC96 275 aa14.62□□□□□ -0.07
PCF11-207ENST00000624931 DTD1Q8TEA8 209 aa14.62□□□□□ -0.07
PCF11-207ENST00000624931 FAM216AQ8WUB2 273 aa14.62□□□□□ -0.07
PCF11-207ENST00000624931 NPCDR1Q9BY65 106 aa14.62□□□□□ -0.07
PCF11-207ENST00000624931 KCNIP2Q9NS61 270 aa14.62□□□□□ -0.07
PCF11-207ENST00000624931 MPDU1O75352 247 aa14.61□□□□□ -0.07
PCF11-207ENST00000624931 RHBDL1O75783 438 aa14.61□□□□□ -0.07
PCF11-207ENST00000624931 SELEP16581 610 aa14.61□□□□□ -0.07
PCF11-207ENST00000624931 GCH1P30793 250 aa14.61□□□□□ -0.07
PCF11-207ENST00000624931 EIF4EBP1Q13541 118 aaPredicted RBP14.61□□□□□ -0.07
PCF11-207ENST00000624931 MBNL2Q5VZF2 373 aaKnown RBP14.61□□□□□ -0.07
PCF11-207ENST00000624931 SLC35E4Q6ICL7 350 aa14.61□□□□□ -0.07
PCF11-207ENST00000624931 TMEM108Q6UXF1 575 aa14.61□□□□□ -0.07
PCF11-207ENST00000624931 MSL2Q9HCI7 577 aa14.61□□□□□ -0.07
PCF11-207ENST00000624931 FUT9Q9Y231 359 aa14.61□□□□□ -0.07
PCF11-207ENST00000624931 SMG1Q96Q15 3661 aaKnown RBP14.61□□□□□ -0.07
PCF11-207ENST00000624931 EPG5Q9HCE0 2579 aa14.61□□□□□ -0.07
PCF11-207ENST00000624931 TRAV9-1A0A075B6T8 112 aa14.61□□□□□ -0.07
PCF11-207ENST00000624931 OOEPA6NGQ2 149 aa14.61□□□□□ -0.07
PCF11-207ENST00000624931 ZNF705GA8MUZ8 300 aaPredicted RBP14.61□□□□□ -0.07
PCF11-207ENST00000624931 PAGE4O60829 102 aa14.61□□□□□ -0.07
PCF11-207ENST00000624931 ZG16O60844 167 aa14.61□□□□□ -0.07
PCF11-207ENST00000624931 KITLGP21583 273 aa14.61□□□□□ -0.07
PCF11-207ENST00000624931 CDC34P49427 236 aaPredicted RBP14.61□□□□□ -0.07
PCF11-207ENST00000624931 GBGT1Q8N5D6 347 aa14.61□□□□□ -0.07
PCF11-207ENST00000624931 SCCPDHQ8NBX0 429 aa14.61□□□□□ -0.07
PCF11-207ENST00000624931 DUSP13Q9UII6 198 aa14.61□□□□□ -0.07
PCF11-207ENST00000624931 ODAMA1E959 279 aa14.6□□□□□ -0.07
PCF11-207ENST00000624931 FAM90A9PA6NNJ1 464 aa14.6□□□□□ -0.07
PCF11-207ENST00000624931 C11orf94C9JXX5 98 aa14.6□□□□□ -0.07
PCF11-207ENST00000624931 NXPH2O95156 264 aa14.6□□□□□ -0.07
PCF11-207ENST00000624931 RNF224P0DH78 156 aa14.6□□□□□ -0.07
PCF11-207ENST00000624931 H2BFWTQ7Z2G1 175 aa14.6□□□□□ -0.07
PCF11-207ENST00000624931 MRPL41Q8IXM3 137 aaKnown RBP14.6□□□□□ -0.07
PCF11-207ENST00000624931 PRR18Q8N4B5 295 aa14.6□□□□□ -0.07
PCF11-207ENST00000624931 TMEM37Q8WXS4 190 aa14.6□□□□□ -0.07
PCF11-207ENST00000624931 GLRXP35754 106 aa14.59□□□□□ -0.07
PCF11-207ENST00000624931 NINJ1Q92982 152 aa14.59□□□□□ -0.07
PCF11-207ENST00000624931 NDUFB7P17568 137 aa14.58□□□□□ -0.07
PCF11-207ENST00000624931 TFF3Q07654 80 aa14.58□□□□□ -0.07
PCF11-207ENST00000624931 USF2Q15853 346 aaPredicted RBP14.58□□□□□ -0.07
PCF11-207ENST00000624931 TMEM144Q7Z5S9 345 aa14.58□□□□□ -0.07
PCF11-207ENST00000624931 NEUROG1Q92886 237 aa14.58□□□□□ -0.07
PCF11-207ENST00000624931 MISP3Q96FF7 219 aa14.58□□□□□ -0.07
PCF11-207ENST00000624931 HSD17B10Q99714 261 aaKnown RBP14.58□□□□□ -0.07
PCF11-207ENST00000624931 TMEM204Q9BSN7 226 aa14.58□□□□□ -0.07
PCF11-207ENST00000624931 WDR83OSQ9Y284 106 aa14.58□□□□□ -0.07
PCF11-207ENST00000624931 HAND1O96004 215 aa14.58□□□□□ -0.08
PCF11-207ENST00000624931 KRASP01116 189 aa14.58□□□□□ -0.08
PCF11-207ENST00000624931 G6PCP35575 357 aa14.58□□□□□ -0.08
PCF11-207ENST00000624931 ERVFC1-1P60608 527 aa14.58□□□□□ -0.08
PCF11-207ENST00000624931 RPL15P61313 204 aaKnown RBP14.58□□□□□ -0.08
PCF11-207ENST00000624931 HOXA4Q00056 320 aaPredicted RBP14.58□□□□□ -0.08
PCF11-207ENST00000624931 PAX5Q02548 391 aa14.58□□□□□ -0.08
PCF11-207ENST00000624931 TRAT1Q6PIZ9 186 aa14.58□□□□□ -0.08
PCF11-207ENST00000624931 LINC01551Q86U37 167 aa14.58□□□□□ -0.08
PCF11-207ENST00000624931 PLPPR2Q96GM1 343 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms