RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 OR4D5Q8NGN0 318 aa8.58□□□□□ -1.04
VPS11-208ENST00000621676 A6NNC1 897 aa8.58□□□□□ -1.04
VPS11-208ENST00000621676 DANCRP0C864 163 aa8.58□□□□□ -1.04
VPS11-208ENST00000621676 SNCAP37840 140 aa8.58□□□□□ -1.04
VPS11-208ENST00000621676 GATA4P43694 442 aa8.58□□□□□ -1.04
VPS11-208ENST00000621676 TLE4Q04727 773 aa8.58□□□□□ -1.04
VPS11-208ENST00000621676 ASPHD1Q5U4P2 390 aa8.58□□□□□ -1.04
VPS11-208ENST00000621676 CCDC28AQ8IWP9 274 aa8.58□□□□□ -1.04
VPS11-208ENST00000621676 OR10Z1Q8NGY1 313 aa8.58□□□□□ -1.04
VPS11-208ENST00000621676 RARRES2Q99969 163 aa8.58□□□□□ -1.04
VPS11-208ENST00000621676 GAL3ST2Q9H3Q3 398 aa8.58□□□□□ -1.04
VPS11-208ENST00000621676 POMT1Q9Y6A1 747 aa8.58□□□□□ -1.04
VPS11-208ENST00000621676 LOC105371242A0A075B767 164 aa8.57□□□□□ -1.04
VPS11-208ENST00000621676 TSPAN4O14817 238 aa8.57□□□□□ -1.04
VPS11-208ENST00000621676 IGHV1-8P0DP01 117 aa8.57□□□□□ -1.04
VPS11-208ENST00000621676 TNFRSF9Q07011 255 aa8.57□□□□□ -1.04
VPS11-208ENST00000621676 SCGB1C1Q8TD33 95 aa8.57□□□□□ -1.04
VPS11-208ENST00000621676 CD300LFQ8TDQ1 290 aa8.57□□□□□ -1.04
VPS11-208ENST00000621676 TMEM56Q96MV1 263 aa8.57□□□□□ -1.04
VPS11-208ENST00000621676 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.57□□□□□ -1.04
VPS11-208ENST00000621676 TMEM56-RWDD3S4R434 201 aa8.57□□□□□ -1.04
VPS11-208ENST00000621676 SAA1P0DJI8 122 aaPredicted RBP8.57□□□□□ -1.04
VPS11-208ENST00000621676 HNF1AP20823 631 aa8.57□□□□□ -1.04
VPS11-208ENST00000621676 MMDQ15546 238 aa8.57□□□□□ -1.04
VPS11-208ENST00000621676 ATRAIDQ6UW56 229 aa8.57□□□□□ -1.04
VPS11-208ENST00000621676 IL17RELQ6ZVW7 336 aa8.57□□□□□ -1.04
VPS11-208ENST00000621676 SSBP3Q9BWW4 388 aaPredicted RBP8.57□□□□□ -1.04
VPS11-208ENST00000621676 ZNF355PQ9NSJ1 428 aa8.57□□□□□ -1.04
VPS11-208ENST00000621676 J3QR06 171 aa8.57□□□□□ -1.04
VPS11-208ENST00000621676 IGHV4-39P01824 125 aa8.57□□□□□ -1.04
VPS11-208ENST00000621676 ENY2Q9NPA8 101 aa8.57□□□□□ -1.04
VPS11-208ENST00000621676 JPT1Q9UK76 154 aa8.57□□□□□ -1.04
VPS11-208ENST00000621676 IL15RAQ13261 267 aa8.56□□□□□ -1.04
VPS11-208ENST00000621676 ODF3L1Q8IXM7 274 aa8.56□□□□□ -1.04
VPS11-208ENST00000621676 LRRC20Q8TCA0 184 aa8.56□□□□□ -1.04
VPS11-208ENST00000621676 FLYWCH2Q96CP2 140 aaKnown RBP8.56□□□□□ -1.04
VPS11-208ENST00000621676 EAF1Q96JC9 268 aaPredicted RBP8.56□□□□□ -1.04
VPS11-208ENST00000621676 COMMD5Q9GZQ3 224 aa8.56□□□□□ -1.04
VPS11-208ENST00000621676 LINC00312Q9Y6C7 94 aa8.56□□□□□ -1.04
VPS11-208ENST00000621676 IGHV4-30-2A0A087WSY4 118 aa8.56□□□□□ -1.04
VPS11-208ENST00000621676 BORCS7-ASMTA0A0B4J1R7 106 aa8.56□□□□□ -1.04
VPS11-208ENST00000621676 IGHV2-26A0A0B4J1V2 119 aa8.56□□□□□ -1.04
VPS11-208ENST00000621676 IGHV4-61A0A0C4DH41 118 aa8.56□□□□□ -1.04
VPS11-208ENST00000621676 TIMM23O14925 209 aa8.56□□□□□ -1.04
VPS11-208ENST00000621676 TSPAN15O95858 294 aa8.56□□□□□ -1.04
VPS11-208ENST00000621676 IFNA5P01569 189 aa8.56□□□□□ -1.04
VPS11-208ENST00000621676 SLC25A4P12235 298 aa8.56□□□□□ -1.04
VPS11-208ENST00000621676 F2RL1P55085 397 aa8.56□□□□□ -1.04
VPS11-208ENST00000621676 SRSF1Q07955 248 aaKnown RBP eCLIP8.56□□□□□ -1.04
VPS11-208ENST00000621676 MSMO1Q15800 293 aa8.56□□□□□ -1.04
VPS11-208ENST00000621676 AANATQ16613 207 aa8.56□□□□□ -1.04
VPS11-208ENST00000621676 ZNF787Q6DD87 383 aa8.56□□□□□ -1.04
VPS11-208ENST00000621676 HAPLN4Q86UW8 402 aa8.56□□□□□ -1.04
VPS11-208ENST00000621676 MISP3Q96FF7 219 aa8.56□□□□□ -1.04
VPS11-208ENST00000621676 TET2Q6N021 2002 aaPredicted RBP8.56□□□□□ -1.04
VPS11-208ENST00000621676 IGHV3OR16-13A0A075B7E8 117 aa8.55□□□□□ -1.04
VPS11-208ENST00000621676 IGHV3-74A0A0B4J1X5 117 aa8.55□□□□□ -1.04
VPS11-208ENST00000621676 NQO2P16083 231 aa8.55□□□□□ -1.04
VPS11-208ENST00000621676 ID3Q02535 119 aa8.55□□□□□ -1.04
VPS11-208ENST00000621676 ZNF674Q2M3X9 581 aa8.55□□□□□ -1.04
VPS11-208ENST00000621676 BPIFCQ8NFQ6 507 aa8.55□□□□□ -1.04
VPS11-208ENST00000621676 OR10A7Q8NGE5 316 aa8.55□□□□□ -1.04
VPS11-208ENST00000621676 GATAD1Q8WUU5 269 aa8.55□□□□□ -1.04
VPS11-208ENST00000621676 GNG13Q9P2W3 67 aa8.55□□□□□ -1.04
VPS11-208ENST00000621676 YPEL1O60688 119 aa8.55□□□□□ -1.04
VPS11-208ENST00000621676 IGKV1D-33P01593 117 aa8.55□□□□□ -1.04
VPS11-208ENST00000621676 IGKV1-33P01594 117 aa8.55□□□□□ -1.04
VPS11-208ENST00000621676 TUBG1P23258 451 aa8.55□□□□□ -1.04
VPS11-208ENST00000621676 SRSF4Q08170 494 aaKnown RBP8.55□□□□□ -1.04
VPS11-208ENST00000621676 ZNF295-AS1Q8N0V1 137 aa8.55□□□□□ -1.04
VPS11-208ENST00000621676 OR2T6Q8NHC8 308 aa8.55□□□□□ -1.04
VPS11-208ENST00000621676 NEIL1Q96FI4 390 aaPredicted RBP8.55□□□□□ -1.04
VPS11-208ENST00000621676 YPEL2Q96QA6 119 aa8.55□□□□□ -1.04
VPS11-208ENST00000621676 HSD17B10Q99714 261 aaKnown RBP8.55□□□□□ -1.04
VPS11-208ENST00000621676 TUBG2Q9NRH3 451 aa8.55□□□□□ -1.04
VPS11-208ENST00000621676 RNF212BA8MTL3 300 aa8.55□□□□□ -1.04
VPS11-208ENST00000621676 C9JQL5 133 aa8.55□□□□□ -1.04
VPS11-208ENST00000621676 GPR137BO60478 399 aa8.55□□□□□ -1.04
VPS11-208ENST00000621676 AKR1C8PQ5T2L2 129 aa8.55□□□□□ -1.04
VPS11-208ENST00000621676 FAM122CQ6P4D5 195 aa8.55□□□□□ -1.04
VPS11-208ENST00000621676 HEPN1Q6WQI6 88 aa8.55□□□□□ -1.04
VPS11-208ENST00000621676 DYNAPQ8N1N2 210 aa8.55□□□□□ -1.04
VPS11-208ENST00000621676 POM121Q96HA1 1249 aa8.55□□□□□ -1.04
VPS11-208ENST00000621676 AKR1E2Q96JD6 320 aa8.55□□□□□ -1.04
VPS11-208ENST00000621676 SGK494Q96LW2 274 aa8.55□□□□□ -1.04
VPS11-208ENST00000621676 ZNF251Q9BRH9 671 aa8.55□□□□□ -1.04
VPS11-208ENST00000621676 TCF19Q9Y242 345 aa8.55□□□□□ -1.04
VPS11-208ENST00000621676 PRELID1Q9Y255 219 aa8.55□□□□□ -1.04
VPS11-208ENST00000621676 STRAPQ9Y3F4 350 aaKnown RBP8.55□□□□□ -1.04
VPS11-208ENST00000621676 OR51B2Q9Y5P1 312 aa8.55□□□□□ -1.04
VPS11-208ENST00000621676 MMP24Q9Y5R2 645 aa8.55□□□□□ -1.04
VPS11-208ENST00000621676 ZNF729A6NN14 1252 aaPredicted RBP8.54□□□□□ -1.04
VPS11-208ENST00000621676 F8W036 122 aa8.54□□□□□ -1.04
VPS11-208ENST00000621676 HLA-GP17693 338 aa8.54□□□□□ -1.04
VPS11-208ENST00000621676 FGF7P21781 194 aa8.54□□□□□ -1.04
VPS11-208ENST00000621676 CFHR2P36980 270 aa8.54□□□□□ -1.04
VPS11-208ENST00000621676 UBA52P62987 128 aaKnown RBP8.54□□□□□ -1.04
VPS11-208ENST00000621676 BLOC1S1P78537 153 aa8.54□□□□□ -1.04
VPS11-208ENST00000621676 SRPXP78539 464 aa8.54□□□□□ -1.04
VPS11-208ENST00000621676 TMEM65Q6PI78 240 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms