RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 SIKE1Q9BRV8 207 aa1.61□□□□□ -2.15
CPNE3-211ENST00000621526 PAXXQ9BUH6 204 aa1.61□□□□□ -2.15
CPNE3-211ENST00000621526 C20orf24Q9BUV8 137 aa1.61□□□□□ -2.15
CPNE3-211ENST00000621526 RIBC2Q9H4K1 309 aa1.61□□□□□ -2.15
CPNE3-211ENST00000621526 VSIRQ9H7M9 311 aa1.61□□□□□ -2.15
CPNE3-211ENST00000621526 Q9N2K0 584 aa1.61□□□□□ -2.15
CPNE3-211ENST00000621526 ARMC1Q9NVT9 282 aa1.61□□□□□ -2.15
CPNE3-211ENST00000621526 CLEC5AQ9NY25 188 aa1.61□□□□□ -2.15
CPNE3-211ENST00000621526 TAS2R1Q9NYW7 299 aa1.61□□□□□ -2.15
CPNE3-211ENST00000621526 FRRS1LQ9P0K9 344 aa1.61□□□□□ -2.15
CPNE3-211ENST00000621526 HSF4Q9ULV5 492 aa1.61□□□□□ -2.15
CPNE3-211ENST00000621526 MGAT4AQ9UM21 535 aa1.61□□□□□ -2.15
CPNE3-211ENST00000621526 MRPS16Q9Y3D3 137 aaKnown RBP1.61□□□□□ -2.15
CPNE3-211ENST00000621526 PEX16Q9Y5Y5 336 aa1.61□□□□□ -2.15
CPNE3-211ENST00000621526 TRBV6-6A0A0A6YYG2 114 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 IGHV3-35A0A0C4DH35 117 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 A0A1W2PQL4 384 aaPredicted RBP1.6□□□□□ -2.15
CPNE3-211ENST00000621526 A0A1W2PS18 150 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 LRCOL1A6NCL2 159 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 CCDC182A6NF36 153 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 OR2T8A6NH00 312 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 HMX3A6NHT5 357 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 OR4C45A6NMZ5 311 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 E7EUB6 86 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 F5H768 121 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 H3BMM0 161 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 K7EQG2 157 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 GABRPO00591 440 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 SIVA1O15304 175 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 DCTN3O75935 186 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 CDRT1O95170 752 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 IGLV2-11P01706 119 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 IGLV2-8P01709 118 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 IGHV3-23P01764 117 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 HBE1P02100 147 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 FGF2P09038 288 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 OSMP13725 252 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 TSPOP30536 169 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 GPR183P32249 361 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 ZNF93P35789 620 aaPredicted RBP1.6□□□□□ -2.15
CPNE3-211ENST00000621526 SOX2P48431 317 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 SERPINB10P48595 397 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 PSMD7P51665 324 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 PSME3P61289 254 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 B2MP61769 119 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 PLA2G7Q13093 441 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 ARFRP1Q13795 201 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 ZSCAN26Q16670 478 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 RRN3P1Q2M238 152 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 ACTL10Q5JWF8 245 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 AADACL4Q5VUY2 407 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 SPATA31B1PQ5VZV4 182 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 OR10K2Q6IF99 312 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 ZNF880Q6PDB4 577 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 TCF24Q7RTU0 167 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 HSD17B13Q7Z5P4 300 aaPredicted RBP1.6□□□□□ -2.15
CPNE3-211ENST00000621526 MFSD4AQ8N468 514 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 CBR4Q8N4T8 237 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 OR9Q2Q8NGE9 314 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 OR10K1Q8NGX5 313 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 TMEM167AQ8TBQ9 72 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 MRPL30Q8TCC3 161 aaKnown RBP1.6□□□□□ -2.15
CPNE3-211ENST00000621526 RNF141Q8WVD5 230 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 ACOT12Q8WYK0 555 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 DAZAP1Q96EP5 407 aaKnown RBP1.6□□□□□ -2.15
CPNE3-211ENST00000621526 NSL1Q96IY1 281 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 MYCBPQ99417 103 aaPredicted RBP1.6□□□□□ -2.15
CPNE3-211ENST00000621526 GPER1Q99527 375 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 FEVQ99581 238 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 AIFM2Q9BRQ8 373 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 CENPOQ9BU64 300 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 CHAC1Q9BUX1 264 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 TMEM231Q9H6L2 316 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 ISG20L2Q9H9L3 353 aaKnown RBP1.6□□□□□ -2.15
CPNE3-211ENST00000621526 EFCAB1Q9HAE3 211 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 TMEM138Q9NPI0 162 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 BABAM2Q9NXR7 383 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 NKIRAS1Q9NYS0 192 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 ZNF581Q9P0T4 197 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 XCL2Q9UBD3 114 aa1.6□□□□□ -2.15
CPNE3-211ENST00000621526 WARS2Q9UGM6 360 aaKnown RBP1.6□□□□□ -2.15
CPNE3-211ENST00000621526 EXOGQ9Y2C4 368 aaKnown RBP1.6□□□□□ -2.15
CPNE3-211ENST00000621526 YTHDF2Q9Y5A9 579 aaKnown RBP1.6□□□□□ -2.15
CPNE3-211ENST00000621526 IGKV3-7A0A075B6H7 116 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 IGHV3OR16-8A0A075B7F1 116 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 LOC102723971A0A1B0GUV8 181 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 UBE2QL1A1L167 161 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 MFSD2BA6NFX1 497 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 MARCH11A6NNE9 402 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 KNCNA6PVL3 124 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 LINC00473A8K010 186 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 KRTAP9-7A8MTY7 169 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 NPIPB6E9PJ23 425 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 M0R1X1 148 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 NME4O00746 187 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 NUPL2O15504 423 aaKnown RBP1.59□□□□□ -2.15
CPNE3-211ENST00000621526 ST8SIA3O43173 380 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 PDCD6O75340 191 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 DIRAS3O95661 229 aa1.59□□□□□ -2.15
CPNE3-211ENST00000621526 BAG2O95816 211 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms