RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 FABP7O15540 132 aa3.76□□□□□ -1.81
VPS29-212ENST00000621131 B3GALNT1O75752 331 aa3.76□□□□□ -1.81
VPS29-212ENST00000621131 SFT2D2O95562 160 aa3.76□□□□□ -1.81
VPS29-212ENST00000621131 OR2H2O95918 312 aa3.76□□□□□ -1.81
VPS29-212ENST00000621131 CTSDP07339 412 aaPredicted RBP3.76□□□□□ -1.81
VPS29-212ENST00000621131 ZNF735P0CB33 412 aa3.76□□□□□ -1.81
VPS29-212ENST00000621131 FXYD4P59646 89 aa3.76□□□□□ -1.81
VPS29-212ENST00000621131 HLA-DRB3P79483 266 aa3.76□□□□□ -1.81
VPS29-212ENST00000621131 BSPH1Q075Z2 132 aa3.76□□□□□ -1.81
VPS29-212ENST00000621131 DHRS2Q13268 280 aa3.76□□□□□ -1.81
VPS29-212ENST00000621131 SMCO1Q147U7 214 aa3.76□□□□□ -1.81
VPS29-212ENST00000621131 ZNF146Q15072 292 aa3.76□□□□□ -1.81
VPS29-212ENST00000621131 VWC2Q2TAL6 325 aa3.76□□□□□ -1.81
VPS29-212ENST00000621131 ALKBH6Q3KRA9 238 aa3.76□□□□□ -1.81
VPS29-212ENST00000621131 FBXL19-AS1Q494R0 122 aa3.76□□□□□ -1.81
VPS29-212ENST00000621131 BEX5Q5H9J7 111 aa3.76□□□□□ -1.81
VPS29-212ENST00000621131 PRAMEF6Q5VXH4 476 aa3.76□□□□□ -1.81
VPS29-212ENST00000621131 ACP7Q6ZNF0 438 aa3.76□□□□□ -1.81
VPS29-212ENST00000621131 NCCRP1Q6ZVX7 275 aaPredicted RBP3.76□□□□□ -1.81
VPS29-212ENST00000621131 KCTD9Q7L273 389 aa3.76□□□□□ -1.81
VPS29-212ENST00000621131 SLC36A1Q7Z2H8 476 aa3.76□□□□□ -1.81
VPS29-212ENST00000621131 CMTM1Q8IZ96 169 aa3.76□□□□□ -1.81
VPS29-212ENST00000621131 ASCC1Q8N9N2 400 aaKnown RBP3.76□□□□□ -1.81
VPS29-212ENST00000621131 OR13C8Q8NGS7 320 aa3.76□□□□□ -1.81
VPS29-212ENST00000621131 OR2T35Q8NGX2 323 aa3.76□□□□□ -1.81
VPS29-212ENST00000621131 CASTOR1Q8WTX7 329 aa3.76□□□□□ -1.81
VPS29-212ENST00000621131 CAPSLQ8WWF8 208 aa3.76□□□□□ -1.81
VPS29-212ENST00000621131 RDH5Q92781 318 aa3.76□□□□□ -1.81
VPS29-212ENST00000621131 PIK3IP1Q96FE7 263 aa3.76□□□□□ -1.81
VPS29-212ENST00000621131 NRIP2Q9BQI9 281 aa3.76□□□□□ -1.81
VPS29-212ENST00000621131 CHIAQ9BZP6 476 aa3.76□□□□□ -1.81
VPS29-212ENST00000621131 FGF23Q9GZV9 251 aaPredicted RBP3.76□□□□□ -1.81
VPS29-212ENST00000621131 METTL8Q9H825 291 aaKnown RBP3.76□□□□□ -1.81
VPS29-212ENST00000621131 CA10Q9NS85 328 aa3.76□□□□□ -1.81
VPS29-212ENST00000621131 UFSP2Q9NUQ7 469 aa3.76□□□□□ -1.81
VPS29-212ENST00000621131 IL19Q9UHD0 177 aa3.76□□□□□ -1.81
VPS29-212ENST00000621131 SHPKQ9UHJ6 478 aa3.76□□□□□ -1.81
VPS29-212ENST00000621131 ZNF230Q9UIE0 474 aaPredicted RBP3.76□□□□□ -1.81
VPS29-212ENST00000621131 GPR132Q9UNW8 380 aa3.76□□□□□ -1.81
VPS29-212ENST00000621131 VSIG4Q9Y279 399 aa3.76□□□□□ -1.81
VPS29-212ENST00000621131 INTS1Q8N201 2190 aaKnown RBP3.76□□□□□ -1.81
VPS29-212ENST00000621131 VPS13CQ709C8 3753 aa3.76□□□□□ -1.81
VPS29-212ENST00000621131 A0A1B0GWJ7 208 aa3.75□□□□□ -1.81
VPS29-212ENST00000621131 C9orf170A2RU37 121 aa3.75□□□□□ -1.81
VPS29-212ENST00000621131 TUBAL3A6NHL2 446 aa3.75□□□□□ -1.81
VPS29-212ENST00000621131 OR2AT4A6NND4 320 aa3.75□□□□□ -1.81
VPS29-212ENST00000621131 CEACAM18A8MTB9 384 aa3.75□□□□□ -1.81
VPS29-212ENST00000621131 L7N2F9 121 aa3.75□□□□□ -1.81
VPS29-212ENST00000621131 GPR31O00270 319 aa3.75□□□□□ -1.81
VPS29-212ENST00000621131 SLC33A1O00400 549 aaPredicted RBP3.75□□□□□ -1.81
VPS29-212ENST00000621131 MLNRO43193 412 aa3.75□□□□□ -1.81
VPS29-212ENST00000621131 RHBDL1O75783 438 aa3.75□□□□□ -1.81
VPS29-212ENST00000621131 NAPSAO96009 420 aa3.75□□□□□ -1.81
VPS29-212ENST00000621131 PPYP01298 95 aa3.75□□□□□ -1.81
VPS29-212ENST00000621131 RLN2P04090 185 aa3.75□□□□□ -1.81
VPS29-212ENST00000621131 ZBTB25P24278 435 aa3.75□□□□□ -1.81
VPS29-212ENST00000621131 IL2RGP31785 369 aa3.75□□□□□ -1.81
VPS29-212ENST00000621131 FCGR2CP31995 323 aa3.75□□□□□ -1.81
VPS29-212ENST00000621131 CFHR2P36980 270 aa3.75□□□□□ -1.81
VPS29-212ENST00000621131 GABRA2P47869 451 aa3.75□□□□□ -1.81
VPS29-212ENST00000621131 SNRPD2P62316 118 aaKnown RBP3.75□□□□□ -1.81
VPS29-212ENST00000621131 BAMBIQ13145 260 aa3.75□□□□□ -1.81
VPS29-212ENST00000621131 PPP1R1AQ13522 171 aa3.75□□□□□ -1.81
VPS29-212ENST00000621131 OPCMLQ14982 345 aa3.75□□□□□ -1.81
VPS29-212ENST00000621131 ATXN7L3Q14CW9 347 aaPredicted RBP3.75□□□□□ -1.81
VPS29-212ENST00000621131 SLC9A3R2Q15599 337 aa3.75□□□□□ -1.81
VPS29-212ENST00000621131 NDUFA5Q16718 116 aa3.75□□□□□ -1.81
VPS29-212ENST00000621131 KRBOX4Q5JUW0 171 aa3.75□□□□□ -1.81
VPS29-212ENST00000621131 NCMAPQ5T1S8 102 aa3.75□□□□□ -1.81
VPS29-212ENST00000621131 DHRS11Q6UWP2 260 aa3.75□□□□□ -1.81
VPS29-212ENST00000621131 WDR82Q6UXN9 313 aa3.75□□□□□ -1.81
VPS29-212ENST00000621131 Q6ZR03 302 aa3.75□□□□□ -1.81
VPS29-212ENST00000621131 LHFPL1Q86WI0 220 aa3.75□□□□□ -1.81
VPS29-212ENST00000621131 FGFRL1Q8N441 504 aa3.75□□□□□ -1.81
VPS29-212ENST00000621131 OR11H7Q8NGC8 314 aa3.75□□□□□ -1.81
VPS29-212ENST00000621131 OR52B4Q8NGK2 314 aa3.75□□□□□ -1.81
VPS29-212ENST00000621131 OR5D13Q8NGL4 314 aa3.75□□□□□ -1.81
VPS29-212ENST00000621131 LILRB4Q8NHJ6 448 aa3.75□□□□□ -1.81
VPS29-212ENST00000621131 GRPEL2Q8TAA5 225 aa3.75□□□□□ -1.81
VPS29-212ENST00000621131 MRPL30Q8TCC3 161 aaKnown RBP3.75□□□□□ -1.81
VPS29-212ENST00000621131 MITD1Q8WV92 249 aa3.75□□□□□ -1.81
VPS29-212ENST00000621131 ITLN1Q8WWA0 313 aa3.75□□□□□ -1.81
VPS29-212ENST00000621131 GALMQ96C23 342 aa3.75□□□□□ -1.81
VPS29-212ENST00000621131 ZNF488Q96MN9 340 aa3.75□□□□□ -1.81
VPS29-212ENST00000621131 OR2V2Q96R30 315 aa3.75□□□□□ -1.81
VPS29-212ENST00000621131 SPIN2AQ99865 258 aa3.75□□□□□ -1.81
VPS29-212ENST00000621131 SPIN2BQ9BPZ2 258 aa3.75□□□□□ -1.81
VPS29-212ENST00000621131 HDHD3Q9BSH5 251 aaPredicted RBP3.75□□□□□ -1.81
VPS29-212ENST00000621131 SUCNR1Q9BXA5 334 aa3.75□□□□□ -1.81
VPS29-212ENST00000621131 GON7Q9BXV9 100 aa3.75□□□□□ -1.81
VPS29-212ENST00000621131 MRPL37Q9BZE1 423 aaKnown RBP3.75□□□□□ -1.81
VPS29-212ENST00000621131 HES4Q9HCC6 221 aa3.75□□□□□ -1.81
VPS29-212ENST00000621131 DNAJC4Q9NNZ3 241 aa3.75□□□□□ -1.81
VPS29-212ENST00000621131 RAB18Q9NP72 206 aa3.75□□□□□ -1.81
VPS29-212ENST00000621131 GSN-AS1Q9NRJ2 163 aa3.75□□□□□ -1.81
VPS29-212ENST00000621131 RNF115Q9Y4L5 304 aa3.75□□□□□ -1.81
VPS29-212ENST00000621131 SHANK1Q9Y566 2161 aa3.75□□□□□ -1.81
VPS29-212ENST00000621131 FXYD6-FXYD2A0A087WZ82 144 aa3.74□□□□□ -1.81
VPS29-212ENST00000621131 TRAV38-1A0A0B4J264 116 aa3.74□□□□□ -1.81
VPS29-212ENST00000621131 TRAV24A0A0B4J272 114 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms