RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 PRAMEF5Q5TYX0 476 aa16.23■□□□□ 0.19
PDLIM3-212ENST00000620787 PRAMEF6Q5VXH4 476 aa16.23■□□□□ 0.19
PDLIM3-212ENST00000620787 SPRY4Q9C004 299 aa16.23■□□□□ 0.19
PDLIM3-212ENST00000620787 ABI3Q9P2A4 366 aa16.23■□□□□ 0.19
PDLIM3-212ENST00000620787 CDKN1AP38936 164 aa16.23■□□□□ 0.19
PDLIM3-212ENST00000620787 LRP11Q86VZ4 500 aa16.23■□□□□ 0.19
PDLIM3-212ENST00000620787 HSPB9Q9BQS6 159 aa16.23■□□□□ 0.19
PDLIM3-212ENST00000620787 MIEN1Q9BRT3 115 aa16.23■□□□□ 0.19
PDLIM3-212ENST00000620787 DCTN5Q9BTE1 182 aa16.23■□□□□ 0.19
PDLIM3-212ENST00000620787 HEYLQ9NQ87 328 aaPredicted RBP16.23■□□□□ 0.19
PDLIM3-212ENST00000620787 C15orf65H3BRN8 121 aa16.22■□□□□ 0.19
PDLIM3-212ENST00000620787 GCHFRP30047 84 aa16.22■□□□□ 0.19
PDLIM3-212ENST00000620787 LGALS4P56470 323 aa16.22■□□□□ 0.19
PDLIM3-212ENST00000620787 RPL31P62899 125 aaKnown RBP16.22■□□□□ 0.19
PDLIM3-212ENST00000620787 KLF14Q8TD94 323 aaPredicted RBP16.22■□□□□ 0.19
PDLIM3-212ENST00000620787 GMPPAQ96IJ6 420 aaPredicted RBP16.22■□□□□ 0.19
PDLIM3-212ENST00000620787 GFRA3O60609 400 aa16.22■□□□□ 0.19
PDLIM3-212ENST00000620787 RPLP1P05386 114 aaKnown RBP16.22■□□□□ 0.19
PDLIM3-212ENST00000620787 IRF2P14316 349 aa16.22■□□□□ 0.19
PDLIM3-212ENST00000620787 WDR82Q6UXN9 313 aa16.22■□□□□ 0.19
PDLIM3-212ENST00000620787 OR1L6Q8NGR2 347 aa16.22■□□□□ 0.19
PDLIM3-212ENST00000620787 OR4A16Q8NH70 328 aa16.22■□□□□ 0.19
PDLIM3-212ENST00000620787 F2Z2F3 143 aa16.21■□□□□ 0.19
PDLIM3-212ENST00000620787 TNFSF15O95150 251 aa16.21■□□□□ 0.19
PDLIM3-212ENST00000620787 TDGF1P13385 188 aa16.21■□□□□ 0.19
PDLIM3-212ENST00000620787 RANP62826 216 aaKnown RBP16.21■□□□□ 0.19
PDLIM3-212ENST00000620787 TGFBR3Q03167 851 aa16.21■□□□□ 0.19
PDLIM3-212ENST00000620787 SPATA31B1PQ5VZV4 182 aa16.21■□□□□ 0.19
PDLIM3-212ENST00000620787 CYB5R2Q6BCY4 276 aa16.21■□□□□ 0.19
PDLIM3-212ENST00000620787 C11orf52Q96A22 123 aa16.21■□□□□ 0.19
PDLIM3-212ENST00000620787 LSM4Q9Y4Z0 139 aaKnown RBP16.21■□□□□ 0.19
PDLIM3-212ENST00000620787 TNRC18O15417 2968 aaPredicted RBP16.21■□□□□ 0.19
PDLIM3-212ENST00000620787 A6NNC1 897 aa16.21■□□□□ 0.19
PDLIM3-212ENST00000620787 SP1P08047 785 aa16.21■□□□□ 0.19
PDLIM3-212ENST00000620787 FRMD6-AS1P0C7T7 363 aa16.21■□□□□ 0.19
PDLIM3-212ENST00000620787 COL8A2P25067 703 aa16.21■□□□□ 0.19
PDLIM3-212ENST00000620787 GPR12P47775 334 aa16.21■□□□□ 0.19
PDLIM3-212ENST00000620787 HTD2P86397 168 aa16.21■□□□□ 0.19
PDLIM3-212ENST00000620787 LTC4SQ16873 150 aa16.21■□□□□ 0.19
PDLIM3-212ENST00000620787 KRTCAP3Q53RY4 240 aa16.21■□□□□ 0.19
PDLIM3-212ENST00000620787 VKORC1L1Q8N0U8 176 aa16.21■□□□□ 0.19
PDLIM3-212ENST00000620787 ABHD12Q8N2K0 398 aa16.21■□□□□ 0.19
PDLIM3-212ENST00000620787 OR52E5Q8NH55 327 aa16.21■□□□□ 0.19
PDLIM3-212ENST00000620787 SSMEM1Q8WWF3 244 aa16.21■□□□□ 0.19
PDLIM3-212ENST00000620787 TMEM208Q9BTX3 173 aa16.21■□□□□ 0.19
PDLIM3-212ENST00000620787 IL17BQ9UHF5 180 aa16.21■□□□□ 0.19
PDLIM3-212ENST00000620787 IL6RP08887 468 aaPredicted RBP16.2■□□□□ 0.18
PDLIM3-212ENST00000620787 IGHV1-2P23083 117 aa16.2■□□□□ 0.18
PDLIM3-212ENST00000620787 COMPP49747 757 aaPredicted RBP16.2■□□□□ 0.18
PDLIM3-212ENST00000620787 ZPBPQ9BS86 351 aa16.2■□□□□ 0.18
PDLIM3-212ENST00000620787 CXXC4Q9H2H0 198 aa16.2■□□□□ 0.18
PDLIM3-212ENST00000620787 TRAV3A0A0B4J244 114 aa16.2■□□□□ 0.18
PDLIM3-212ENST00000620787 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.2■□□□□ 0.18
PDLIM3-212ENST00000620787 C9orf172C9J069 976 aa16.2■□□□□ 0.18
PDLIM3-212ENST00000620787 C9JCJ5 164 aa16.2■□□□□ 0.18
PDLIM3-212ENST00000620787 DLEU1O43261 78 aa16.2■□□□□ 0.18
PDLIM3-212ENST00000620787 SPINT2O43291 252 aa16.2■□□□□ 0.18
PDLIM3-212ENST00000620787 ADH4P08319 380 aa16.2■□□□□ 0.18
PDLIM3-212ENST00000620787 ACP1P24666 158 aa16.2■□□□□ 0.18
PDLIM3-212ENST00000620787 RELBQ01201 579 aa16.2■□□□□ 0.18
PDLIM3-212ENST00000620787 DEFB127Q9H1M4 99 aa16.2■□□□□ 0.18
PDLIM3-212ENST00000620787 SEPSECSQ9HD40 501 aaKnown RBP16.2■□□□□ 0.18
PDLIM3-212ENST00000620787 AHCTF1Q8WYP5 2266 aa16.19■□□□□ 0.18
PDLIM3-212ENST00000620787 IER3P46695 156 aa16.19■□□□□ 0.18
PDLIM3-212ENST00000620787 Q0VG73 95 aa16.19■□□□□ 0.18
PDLIM3-212ENST00000620787 EFNB3Q15768 340 aa16.19■□□□□ 0.18
PDLIM3-212ENST00000620787 TMEM183BQ1AE95 376 aa16.19■□□□□ 0.18
PDLIM3-212ENST00000620787 OR5AU1Q8NGC0 362 aa16.19■□□□□ 0.18
PDLIM3-212ENST00000620787 PLPPR2Q96GM1 343 aa16.19■□□□□ 0.18
PDLIM3-212ENST00000620787 EAF1Q96JC9 268 aaPredicted RBP16.19■□□□□ 0.18
PDLIM3-212ENST00000620787 SPRR3Q9UBC9 169 aa16.19■□□□□ 0.18
PDLIM3-212ENST00000620787 PAM16Q9Y3D7 125 aa16.19■□□□□ 0.18
PDLIM3-212ENST00000620787 LY96Q9Y6Y9 160 aa16.19■□□□□ 0.18
PDLIM3-212ENST00000620787 TRGV10A0A0A0MS01 117 aa16.19■□□□□ 0.18
PDLIM3-212ENST00000620787 FCN1O00602 326 aa16.19■□□□□ 0.18
PDLIM3-212ENST00000620787 VN1R17PQ8TDU5 208 aa16.19■□□□□ 0.18
PDLIM3-212ENST00000620787 FAM234AQ9H0X4 552 aa16.19■□□□□ 0.18
PDLIM3-212ENST00000620787 FOXJ2Q9P0K8 574 aa16.19■□□□□ 0.18
PDLIM3-212ENST00000620787 KLF13Q9Y2Y9 288 aaPredicted RBP16.19■□□□□ 0.18
PDLIM3-212ENST00000620787 FOXH1O75593 365 aa16.18■□□□□ 0.18
PDLIM3-212ENST00000620787 LYZL6O75951 148 aa16.18■□□□□ 0.18
PDLIM3-212ENST00000620787 RPEL1Q2QD12 228 aa16.18■□□□□ 0.18
PDLIM3-212ENST00000620787 ARSJQ5FYB0 599 aaPredicted RBP16.18■□□□□ 0.18
PDLIM3-212ENST00000620787 BAGE3Q86Y29 109 aa16.18■□□□□ 0.18
PDLIM3-212ENST00000620787 BAGE2Q86Y30 109 aa16.18■□□□□ 0.18
PDLIM3-212ENST00000620787 CD177Q8N6Q3 437 aa16.18■□□□□ 0.18
PDLIM3-212ENST00000620787 CDX2Q99626 313 aaPredicted RBP16.18■□□□□ 0.18
PDLIM3-212ENST00000620787 LRFN3Q9BTN0 628 aa16.18■□□□□ 0.18
PDLIM3-212ENST00000620787 VAMP8Q9BV40 100 aa16.18■□□□□ 0.18
PDLIM3-212ENST00000620787 NPVFQ9HCQ7 196 aa16.18■□□□□ 0.18
PDLIM3-212ENST00000620787 RNF114Q9Y508 228 aa16.18■□□□□ 0.18
PDLIM3-212ENST00000620787 MMD2Q8IY49 270 aa16.18■□□□□ 0.18
PDLIM3-212ENST00000620787 STPG3Q8N7X2 389 aa16.18■□□□□ 0.18
PDLIM3-212ENST00000620787 MDS2Q8NDY4 140 aa16.18■□□□□ 0.18
PDLIM3-212ENST00000620787 V9GYV3 84 aa16.18■□□□□ 0.18
PDLIM3-212ENST00000620787 A8MXE2 369 aa16.17■□□□□ 0.18
PDLIM3-212ENST00000620787 SNURFLB1AK76 121 aa16.17■□□□□ 0.18
PDLIM3-212ENST00000620787 M0R1X1 148 aa16.17■□□□□ 0.18
PDLIM3-212ENST00000620787 RHOBP62745 196 aa16.17■□□□□ 0.18
PDLIM3-212ENST00000620787 SMIM21Q3B7S5 101 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms