RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 NLRC5Q86WI3 1866 aa9.1□□□□□ -0.95
POLR2A-209ENST00000617998 TCAPO15273 167 aa9.1□□□□□ -0.95
POLR2A-209ENST00000617998 EFNB3Q15768 340 aa9.1□□□□□ -0.95
POLR2A-209ENST00000617998 ZNF56Q15929 161 aa9.1□□□□□ -0.95
POLR2A-209ENST00000617998 DEFB112Q30KQ8 113 aa9.1□□□□□ -0.95
POLR2A-209ENST00000617998 ZNF705GA8MUZ8 300 aaPredicted RBP9.1□□□□□ -0.95
POLR2A-209ENST00000617998 TAAR5O14804 337 aa9.1□□□□□ -0.95
POLR2A-209ENST00000617998 FCGR3AP08637 254 aa9.1□□□□□ -0.95
POLR2A-209ENST00000617998 LINC00869P0C866 280 aa9.1□□□□□ -0.95
POLR2A-209ENST00000617998 CFHR2P36980 270 aa9.1□□□□□ -0.95
POLR2A-209ENST00000617998 TMEM200BQ69YZ2 307 aa9.1□□□□□ -0.95
POLR2A-209ENST00000617998 RXFP4Q8TDU9 374 aa9.1□□□□□ -0.95
POLR2A-209ENST00000617998 TRAV9-2A0A087WT02 112 aa9.1□□□□□ -0.95
POLR2A-209ENST00000617998 PTBP3O95758 552 aaKnown RBP9.1□□□□□ -0.95
POLR2A-209ENST00000617998 CTSDP07339 412 aaPredicted RBP9.1□□□□□ -0.95
POLR2A-209ENST00000617998 IGSF11Q5DX21 431 aa9.1□□□□□ -0.95
POLR2A-209ENST00000617998 PRNTQ86SH4 94 aa9.1□□□□□ -0.95
POLR2A-209ENST00000617998 OR4C16Q8NGL9 310 aa9.1□□□□□ -0.95
POLR2A-209ENST00000617998 NEURL2Q9BR09 285 aa9.1□□□□□ -0.95
POLR2A-209ENST00000617998 OPN4Q9UHM6 478 aa9.1□□□□□ -0.95
POLR2A-209ENST00000617998 MPDZO75970 2070 aa9.09□□□□□ -0.95
POLR2A-209ENST00000617998 RRHO14718 337 aa9.09□□□□□ -0.95
POLR2A-209ENST00000617998 KLF4O43474 513 aa9.09□□□□□ -0.95
POLR2A-209ENST00000617998 VSIG8P0DPA2 414 aa9.09□□□□□ -0.95
POLR2A-209ENST00000617998 SCAND1P57086 179 aa9.09□□□□□ -0.95
POLR2A-209ENST00000617998 PRSS53Q2L4Q9 553 aa9.09□□□□□ -0.95
POLR2A-209ENST00000617998 VPREB3Q9UKI3 123 aa9.09□□□□□ -0.95
POLR2A-209ENST00000617998 CCDC88CQ9P219 2028 aa9.09□□□□□ -0.95
POLR2A-209ENST00000617998 ARID2Q68CP9 1835 aa9.09□□□□□ -0.95
POLR2A-209ENST00000617998 PSMB6P28072 239 aa9.09□□□□□ -0.95
POLR2A-209ENST00000617998 B2MP61769 119 aa9.09□□□□□ -0.95
POLR2A-209ENST00000617998 UNC119Q13432 240 aa9.09□□□□□ -0.95
POLR2A-209ENST00000617998 RNASEKQ6P5S7 137 aaKnown RBP9.09□□□□□ -0.95
POLR2A-209ENST00000617998 TCF24Q7RTU0 167 aa9.09□□□□□ -0.95
POLR2A-209ENST00000617998 VKORC1L1Q8N0U8 176 aa9.09□□□□□ -0.95
POLR2A-209ENST00000617998 USMG5Q96IX5 58 aa9.09□□□□□ -0.95
POLR2A-209ENST00000617998 NRN1Q9NPD7 142 aa9.09□□□□□ -0.95
POLR2A-209ENST00000617998 PLXNA4Q9HCM2 1894 aa9.09□□□□□ -0.95
POLR2A-209ENST00000617998 IGHV4-61A0A0C4DH41 118 aa9.09□□□□□ -0.95
POLR2A-209ENST00000617998 RANP62826 216 aaKnown RBP9.09□□□□□ -0.95
POLR2A-209ENST00000617998 PARP16Q8N5Y8 322 aa9.09□□□□□ -0.95
POLR2A-209ENST00000617998 SOSTQ9BQB4 213 aa9.09□□□□□ -0.95
POLR2A-209ENST00000617998 FAM206AQ9NX38 181 aa9.09□□□□□ -0.95
POLR2A-209ENST00000617998 KRBOX1C9JBD0 128 aa9.09□□□□□ -0.95
POLR2A-209ENST00000617998 NUDT3O95989 172 aa9.09□□□□□ -0.95
POLR2A-209ENST00000617998 V9GYS6 101 aa9.09□□□□□ -0.95
POLR2A-209ENST00000617998 IGHV4-39P01824 125 aa9.09□□□□□ -0.95
POLR2A-209ENST00000617998 AMY1AP04745 511 aa9.09□□□□□ -0.95
POLR2A-209ENST00000617998 PGA5P0DJD9 388 aa9.09□□□□□ -0.95
POLR2A-209ENST00000617998 HKR1P10072 659 aa9.09□□□□□ -0.95
POLR2A-209ENST00000617998 MFAP2P55001 183 aa9.09□□□□□ -0.95
POLR2A-209ENST00000617998 BAGE3Q86Y29 109 aa9.09□□□□□ -0.95
POLR2A-209ENST00000617998 BAGE2Q86Y30 109 aa9.09□□□□□ -0.95
POLR2A-209ENST00000617998 LURAP1LQ8IV03 231 aa9.09□□□□□ -0.95
POLR2A-209ENST00000617998 ZFC3H1O60293 1989 aaKnown RBP9.09□□□□□ -0.96
POLR2A-209ENST00000617998 MFSD2BA6NFX1 497 aa9.08□□□□□ -0.96
POLR2A-209ENST00000617998 IGHV3-48P01763 117 aa9.08□□□□□ -0.96
POLR2A-209ENST00000617998 CX3CL1P78423 397 aa9.08□□□□□ -0.96
POLR2A-209ENST00000617998 NCOR2Q9Y618 2525 aa9.08□□□□□ -0.96
POLR2A-209ENST00000617998 PTTG1O95997 202 aa9.08□□□□□ -0.96
POLR2A-209ENST00000617998 SNRPCP09234 159 aaKnown RBP9.08□□□□□ -0.96
POLR2A-209ENST00000617998 SYNJ2BPP57105 145 aa9.08□□□□□ -0.96
POLR2A-209ENST00000617998 ZNF660Q6AZW8 331 aaPredicted RBP9.08□□□□□ -0.96
POLR2A-209ENST00000617998 TMEM116Q8NCL8 245 aa9.08□□□□□ -0.96
POLR2A-209ENST00000617998 CD5LO43866 347 aa9.08□□□□□ -0.96
POLR2A-209ENST00000617998 UPK1BO75841 260 aa9.08□□□□□ -0.96
POLR2A-209ENST00000617998 MT-ND4LP03901 98 aa9.08□□□□□ -0.96
POLR2A-209ENST00000617998 GNG4P50150 75 aa9.08□□□□□ -0.96
POLR2A-209ENST00000617998 RIPPLY3P57055 190 aa9.08□□□□□ -0.96
POLR2A-209ENST00000617998 PSMG4Q5JS54 123 aa9.08□□□□□ -0.96
POLR2A-209ENST00000617998 IGFL2Q6UWQ7 119 aa9.08□□□□□ -0.96
POLR2A-209ENST00000617998 OR11H1Q8NG94 326 aa9.08□□□□□ -0.96
POLR2A-209ENST00000617998 FOXC2Q99958 501 aa9.08□□□□□ -0.96
POLR2A-209ENST00000617998 AP5S1Q9NUS5 200 aa9.08□□□□□ -0.96
POLR2A-209ENST00000617998 CLPSL1A2RUU4 121 aa9.08□□□□□ -0.96
POLR2A-209ENST00000617998 LYSMD2Q8IV50 215 aa9.08□□□□□ -0.96
POLR2A-209ENST00000617998 PEF1Q9UBV8 284 aaKnown RBP9.08□□□□□ -0.96
POLR2A-209ENST00000617998 KLK11Q9UBX7 282 aa9.08□□□□□ -0.96
POLR2A-209ENST00000617998 SELENOKQ9Y6D0 94 aa9.08□□□□□ -0.96
POLR2A-209ENST00000617998 HEATR1Q9H583 2144 aaKnown RBP9.08□□□□□ -0.96
POLR2A-209ENST00000617998 SEC11BP0C7V7 166 aa9.08□□□□□ -0.96
POLR2A-209ENST00000617998 DAD1P61803 113 aa9.08□□□□□ -0.96
POLR2A-209ENST00000617998 DSPPQ9NZW4 1301 aa9.08□□□□□ -0.96
POLR2A-209ENST00000617998 LEPP41159 167 aa9.07□□□□□ -0.96
POLR2A-209ENST00000617998 FA2HQ7L5A8 372 aa9.07□□□□□ -0.96
POLR2A-209ENST00000617998 C11orf42Q8N5U0 333 aa9.07□□□□□ -0.96
POLR2A-209ENST00000617998 OR51G1Q8NGK1 321 aa9.07□□□□□ -0.96
POLR2A-209ENST00000617998 SRSF12Q8WXF0 261 aaKnown RBP9.07□□□□□ -0.96
POLR2A-209ENST00000617998 C12orf77C9JDV5 145 aa9.07□□□□□ -0.96
POLR2A-209ENST00000617998 RNF224P0DH78 156 aa9.07□□□□□ -0.96
POLR2A-209ENST00000617998 OR10G4Q8NGN3 311 aa9.07□□□□□ -0.96
POLR2A-209ENST00000617998 OR10G9Q8NGN4 311 aa9.07□□□□□ -0.96
POLR2A-209ENST00000617998 OR10G7Q8NGN6 311 aa9.07□□□□□ -0.96
POLR2A-209ENST00000617998 C10orf105Q8TEF2 133 aa9.07□□□□□ -0.96
POLR2A-209ENST00000617998 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.07□□□□□ -0.969e-7■■■■□ 20.2
POLR2A-209ENST00000617998 CD81P60033 236 aa9.07□□□□□ -0.96
POLR2A-209ENST00000617998 HAGHQ16775 308 aa9.07□□□□□ -0.96
POLR2A-209ENST00000617998 LYPD2Q6UXB3 125 aa9.07□□□□□ -0.96
POLR2A-209ENST00000617998 MIEN1Q9BRT3 115 aa9.07□□□□□ -0.96
POLR2A-209ENST00000617998 NPVFQ9HCQ7 196 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms