RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 TMPRSS3P57727 454 aa6.26□□□□□ -1.41
PDE6A-205ENST00000617647 GUSBP1Q15486 140 aa6.26□□□□□ -1.41
PDE6A-205ENST00000617647 C5orf64Q2M2E5 130 aa6.26□□□□□ -1.41
PDE6A-205ENST00000617647 SH2D6Q7Z4S9 175 aa6.26□□□□□ -1.41
PDE6A-205ENST00000617647 ZNF799Q96GE5 643 aa6.26□□□□□ -1.41
PDE6A-205ENST00000617647 DEC1Q9P2X7 70 aa6.26□□□□□ -1.41
PDE6A-205ENST00000617647 TP53TG3Q9ULZ0 132 aa6.26□□□□□ -1.41
PDE6A-205ENST00000617647 TIMM9Q9Y5J7 89 aa6.26□□□□□ -1.41
PDE6A-205ENST00000617647 MED12Q93074 2177 aa6.26□□□□□ -1.41
PDE6A-205ENST00000617647 LOC102723996A0A087X1L8 192 aa6.26□□□□□ -1.41
PDE6A-205ENST00000617647 K7EQS6 105 aa6.26□□□□□ -1.41
PDE6A-205ENST00000617647 CA6P23280 308 aa6.26□□□□□ -1.41
PDE6A-205ENST00000617647 ODF1Q14990 250 aa6.26□□□□□ -1.41
PDE6A-205ENST00000617647 CCL14Q16627 93 aa6.26□□□□□ -1.41
PDE6A-205ENST00000617647 EBLN2Q6P2I7 272 aa6.26□□□□□ -1.41
PDE6A-205ENST00000617647 LINC00114Q6XXX2 140 aa6.26□□□□□ -1.41
PDE6A-205ENST00000617647 TMEM52Q8NDY8 209 aa6.26□□□□□ -1.41
PDE6A-205ENST00000617647 GJC3Q8NFK1 279 aa6.26□□□□□ -1.41
PDE6A-205ENST00000617647 GALMQ96C23 342 aa6.26□□□□□ -1.41
PDE6A-205ENST00000617647 RARRES3Q9UL19 164 aa6.26□□□□□ -1.41
PDE6A-205ENST00000617647 MYO16Q9Y6X6 1858 aa6.26□□□□□ -1.41
PDE6A-205ENST00000617647 PGLYRP1O75594 196 aaPredicted RBP6.26□□□□□ -1.41
PDE6A-205ENST00000617647 SCTP09683 121 aa6.26□□□□□ -1.41
PDE6A-205ENST00000617647 RAC3P60763 192 aa6.26□□□□□ -1.41
PDE6A-205ENST00000617647 OR1C1Q15619 314 aa6.26□□□□□ -1.41
PDE6A-205ENST00000617647 C18orf32Q8TCD1 76 aa6.26□□□□□ -1.41
PDE6A-205ENST00000617647 EAF1Q96JC9 268 aaPredicted RBP6.26□□□□□ -1.41
PDE6A-205ENST00000617647 NPCDR1Q9BY65 106 aa6.26□□□□□ -1.41
PDE6A-205ENST00000617647 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.26□□□□□ -1.41
PDE6A-205ENST00000617647 ZNF355PQ9NSJ1 428 aa6.26□□□□□ -1.41
PDE6A-205ENST00000617647 DUSP13Q9UII6 198 aa6.26□□□□□ -1.41
PDE6A-205ENST00000617647 TRPM7Q96QT4 1865 aa6.26□□□□□ -1.41
PDE6A-205ENST00000617647 KIAA2026Q5HYC2 2103 aa6.25□□□□□ -1.41
PDE6A-205ENST00000617647 DOCK4Q8N1I0 1966 aa6.25□□□□□ -1.41
PDE6A-205ENST00000617647 BCL3P20749 454 aa6.25□□□□□ -1.41
PDE6A-205ENST00000617647 ARL16Q0P5N6 197 aa6.25□□□□□ -1.41
PDE6A-205ENST00000617647 GCSAMLQ5JQS6 135 aa6.25□□□□□ -1.41
PDE6A-205ENST00000617647 LHFPL2Q6ZUX7 228 aa6.25□□□□□ -1.41
PDE6A-205ENST00000617647 CA13Q8N1Q1 262 aa6.25□□□□□ -1.41
PDE6A-205ENST00000617647 OR4F17Q8NGA8 305 aa6.25□□□□□ -1.41
PDE6A-205ENST00000617647 SSC4DQ8WTU2 575 aa6.25□□□□□ -1.41
PDE6A-205ENST00000617647 PSG8Q9UQ74 426 aa6.25□□□□□ -1.41
PDE6A-205ENST00000617647 LSM4Q9Y4Z0 139 aaKnown RBP6.25□□□□□ -1.41
PDE6A-205ENST00000617647 FANCMQ8IYD8 2048 aa6.25□□□□□ -1.41
PDE6A-205ENST00000617647 PLXND1Q9Y4D7 1925 aa6.25□□□□□ -1.41
PDE6A-205ENST00000617647 TRAV5A0A0B4J249 113 aa6.25□□□□□ -1.41
PDE6A-205ENST00000617647 A0A1W2PRE2 83 aa6.25□□□□□ -1.41
PDE6A-205ENST00000617647 WNT2P09544 360 aa6.25□□□□□ -1.41
PDE6A-205ENST00000617647 ID1P41134 155 aa6.25□□□□□ -1.41
PDE6A-205ENST00000617647 ERVK-16P61578 105 aa6.25□□□□□ -1.41
PDE6A-205ENST00000617647 GAGE2BQ13066 116 aa6.25□□□□□ -1.41
PDE6A-205ENST00000617647 GAGE2EQ4V326 116 aa6.25□□□□□ -1.41
PDE6A-205ENST00000617647 RNFT1Q5M7Z0 435 aa6.25□□□□□ -1.41
PDE6A-205ENST00000617647 Q96M66 194 aa6.25□□□□□ -1.41
PDE6A-205ENST00000617647 FAM234AQ9H0X4 552 aa6.25□□□□□ -1.41
PDE6A-205ENST00000617647 IGFLR1Q9H665 355 aa6.25□□□□□ -1.41
PDE6A-205ENST00000617647 GAGE2DQ9UEU5 116 aa6.25□□□□□ -1.41
PDE6A-205ENST00000617647 H0YIG0 161 aa6.25□□□□□ -1.41
PDE6A-205ENST00000617647 ARG2P78540 354 aa6.25□□□□□ -1.41
PDE6A-205ENST00000617647 EGR4Q05215 589 aa6.25□□□□□ -1.41
PDE6A-205ENST00000617647 KIR2DS3Q14952 304 aa6.25□□□□□ -1.41
PDE6A-205ENST00000617647 MIC13Q5XKP0 118 aa6.25□□□□□ -1.41
PDE6A-205ENST00000617647 TMEM211Q6ICI0 200 aa6.25□□□□□ -1.41
PDE6A-205ENST00000617647 ZNF562Q6V9R5 426 aa6.25□□□□□ -1.41
PDE6A-205ENST00000617647 TUSC5Q8IXB3 177 aa6.25□□□□□ -1.41
PDE6A-205ENST00000617647 OR4X2Q8NGF9 303 aa6.25□□□□□ -1.41
PDE6A-205ENST00000617647 HES4Q9HCC6 221 aa6.25□□□□□ -1.41
PDE6A-205ENST00000617647 TMSB15BA0A087X1C1 80 aa6.24□□□□□ -1.41
PDE6A-205ENST00000617647 OR11H12B2RN74 326 aa6.24□□□□□ -1.41
PDE6A-205ENST00000617647 MT-CO3P00414 261 aa6.24□□□□□ -1.41
PDE6A-205ENST00000617647 IGKV1D-33P01593 117 aa6.24□□□□□ -1.41
PDE6A-205ENST00000617647 IGKV1-33P01594 117 aa6.24□□□□□ -1.41
PDE6A-205ENST00000617647 FRMD6-AS1P0C7T7 363 aa6.24□□□□□ -1.41
PDE6A-205ENST00000617647 HES3Q5TGS1 186 aa6.24□□□□□ -1.41
PDE6A-205ENST00000617647 OR11H1Q8NG94 326 aa6.24□□□□□ -1.41
PDE6A-205ENST00000617647 OR11H2Q8NH07 326 aa6.24□□□□□ -1.41
PDE6A-205ENST00000617647 NEUROG1Q92886 237 aa6.24□□□□□ -1.41
PDE6A-205ENST00000617647 SFXN3Q9BWM7 321 aa6.24□□□□□ -1.41
PDE6A-205ENST00000617647 MRPL13Q9BYD1 178 aaKnown RBP6.24□□□□□ -1.41
PDE6A-205ENST00000617647 TMEM140Q9NV12 185 aa6.24□□□□□ -1.41
PDE6A-205ENST00000617647 IZUMO1RA6ND01 250 aa6.24□□□□□ -1.41
PDE6A-205ENST00000617647 GAGE12JA6NER3 117 aa6.24□□□□□ -1.41
PDE6A-205ENST00000617647 TMPRSS2O15393 492 aa6.24□□□□□ -1.41
PDE6A-205ENST00000617647 SYNGR1O43759 233 aa6.24□□□□□ -1.41
PDE6A-205ENST00000617647 GAGE7O76087 117 aa6.24□□□□□ -1.41
PDE6A-205ENST00000617647 DXOO77932 396 aaKnown RBP6.24□□□□□ -1.41
PDE6A-205ENST00000617647 GAGE12FP0CL80 117 aa6.24□□□□□ -1.41
PDE6A-205ENST00000617647 GAGE12GP0CL81 117 aa6.24□□□□□ -1.41
PDE6A-205ENST00000617647 GAGE12IP0CL82 117 aa6.24□□□□□ -1.41
PDE6A-205ENST00000617647 SRD5A2P31213 254 aa6.24□□□□□ -1.41
PDE6A-205ENST00000617647 CX3CL1P78423 397 aa6.24□□□□□ -1.41
PDE6A-205ENST00000617647 GAGE4Q13068 117 aa6.24□□□□□ -1.41
PDE6A-205ENST00000617647 SFTA2Q6UW10 78 aa6.24□□□□□ -1.41
PDE6A-205ENST00000617647 FAM131CQ96AQ9 280 aa6.24□□□□□ -1.41
PDE6A-205ENST00000617647 ZNF775Q96BV0 537 aaPredicted RBP6.24□□□□□ -1.41
PDE6A-205ENST00000617647 APOOQ9BUR5 198 aa6.24□□□□□ -1.41
PDE6A-205ENST00000617647 LIME1Q9H400 295 aa6.24□□□□□ -1.41
PDE6A-205ENST00000617647 SMPXQ9UHP9 88 aa6.24□□□□□ -1.41
PDE6A-205ENST00000617647 RABAC1Q9UI14 185 aa6.24□□□□□ -1.41
PDE6A-205ENST00000617647 INSL6Q9Y581 213 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms