RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 RPL30P62888 115 aaKnown RBP11.02□□□□□ -0.65
PPP4R3B-206ENST00000616407 CCL20P78556 96 aa11.02□□□□□ -0.65
PPP4R3B-206ENST00000616407 HOXA4Q00056 320 aaPredicted RBP11.02□□□□□ -0.65
PPP4R3B-206ENST00000616407 MMDQ15546 238 aa11.02□□□□□ -0.65
PPP4R3B-206ENST00000616407 HCP5Q6MZN7 132 aa11.02□□□□□ -0.65
PPP4R3B-206ENST00000616407 RPRMLQ8N4K4 120 aa11.02□□□□□ -0.65
PPP4R3B-206ENST00000616407 CD177Q8N6Q3 437 aa11.02□□□□□ -0.65
PPP4R3B-206ENST00000616407 SSC4DQ8WTU2 575 aa11.02□□□□□ -0.65
PPP4R3B-206ENST00000616407 IGKV1-5P01602 117 aa11.02□□□□□ -0.65
PPP4R3B-206ENST00000616407 SLC25A5P05141 298 aaKnown RBP11.02□□□□□ -0.65
PPP4R3B-206ENST00000616407 CCL3L1P16619 93 aa11.02□□□□□ -0.65
PPP4R3B-206ENST00000616407 WT1P19544 449 aaPredicted RBP11.02□□□□□ -0.65
PPP4R3B-206ENST00000616407 TFF3Q07654 80 aa11.02□□□□□ -0.65
PPP4R3B-206ENST00000616407 YPEL1O60688 119 aa11.01□□□□□ -0.65
PPP4R3B-206ENST00000616407 CLN5O75503 358 aa11.01□□□□□ -0.65
PPP4R3B-206ENST00000616407 IGHV1-46P01743 117 aa11.01□□□□□ -0.65
PPP4R3B-206ENST00000616407 LYL1P12980 280 aa11.01□□□□□ -0.65
PPP4R3B-206ENST00000616407 MC5RP33032 325 aa11.01□□□□□ -0.65
PPP4R3B-206ENST00000616407 LYZP61626 148 aa11.01□□□□□ -0.65
PPP4R3B-206ENST00000616407 PIP4P1Q86T03 277 aa11.01□□□□□ -0.65
PPP4R3B-206ENST00000616407 OR10G8Q8NGN5 311 aa11.01□□□□□ -0.65
PPP4R3B-206ENST00000616407 OR5B3Q8NH48 314 aa11.01□□□□□ -0.65
PPP4R3B-206ENST00000616407 YPEL2Q96QA6 119 aa11.01□□□□□ -0.65
PPP4R3B-206ENST00000616407 WASHC3Q9Y3C0 194 aa11.01□□□□□ -0.65
PPP4R3B-206ENST00000616407 A0A0G2JRQ6 117 aa11.01□□□□□ -0.65
PPP4R3B-206ENST00000616407 EGR1P18146 543 aa11.01□□□□□ -0.65
PPP4R3B-206ENST00000616407 APOBEC3AP31941 199 aaPredicted RBP11.01□□□□□ -0.65
PPP4R3B-206ENST00000616407 DEFA6Q01524 100 aa11.01□□□□□ -0.65
PPP4R3B-206ENST00000616407 ZNF506Q5JVG8 444 aa11.01□□□□□ -0.65
PPP4R3B-206ENST00000616407 COQ2Q96H96 371 aa11.01□□□□□ -0.65
PPP4R3B-206ENST00000616407 TIMM9Q9Y5J7 89 aa11.01□□□□□ -0.65
PPP4R3B-206ENST00000616407 IGHV3-48P01763 117 aa11.01□□□□□ -0.65
PPP4R3B-206ENST00000616407 SUMO1P63165 101 aaKnown RBP11.01□□□□□ -0.65
PPP4R3B-206ENST00000616407 OR9G1Q8NH87 305 aa11.01□□□□□ -0.65
PPP4R3B-206ENST00000616407 SNRNP40Q96DI7 357 aaKnown RBP11.01□□□□□ -0.65
PPP4R3B-206ENST00000616407 NPCDR1Q9BY65 106 aa11.01□□□□□ -0.65
PPP4R3B-206ENST00000616407 HILPDAQ9Y5L2 63 aa11.01□□□□□ -0.65
PPP4R3B-206ENST00000616407 LOC102723971A0A1B0GUV8 181 aa11□□□□□ -0.65
PPP4R3B-206ENST00000616407 FOXI3A8MTJ6 420 aaPredicted RBP11□□□□□ -0.65
PPP4R3B-206ENST00000616407 B9A039 149 aa11□□□□□ -0.65
PPP4R3B-206ENST00000616407 RPL27AP46776 148 aaKnown RBP11□□□□□ -0.65
PPP4R3B-206ENST00000616407 CSN1S1P47710 185 aa11□□□□□ -0.65
PPP4R3B-206ENST00000616407 LINC00205P59089 165 aa11□□□□□ -0.65
PPP4R3B-206ENST00000616407 OR4A47Q6IF82 309 aa11□□□□□ -0.65
PPP4R3B-206ENST00000616407 HIST1H2BAQ96A08 127 aa11□□□□□ -0.65
PPP4R3B-206ENST00000616407 P2RX4Q99571 388 aa11□□□□□ -0.65
PPP4R3B-206ENST00000616407 SRP19P09132 144 aaKnown RBP11□□□□□ -0.65
PPP4R3B-206ENST00000616407 DUTP33316 252 aaKnown RBP11□□□□□ -0.65
PPP4R3B-206ENST00000616407 MEOX2P50222 304 aa11□□□□□ -0.65
PPP4R3B-206ENST00000616407 Q56UQ5 140 aa11□□□□□ -0.65
PPP4R3B-206ENST00000616407 C16orf82Q7Z2V1 217 aa11□□□□□ -0.65
PPP4R3B-206ENST00000616407 WDR86Q86TI4 376 aa11□□□□□ -0.65
PPP4R3B-206ENST00000616407 DOLPP1Q86YN1 238 aa11□□□□□ -0.65
PPP4R3B-206ENST00000616407 ANAPC16Q96DE5 110 aa11□□□□□ -0.65
PPP4R3B-206ENST00000616407 CA2P00918 260 aa11□□□□□ -0.65
PPP4R3B-206ENST00000616407 PRR14LQ5THK1 2151 aa11□□□□□ -0.65
PPP4R3B-206ENST00000616407 Q6ZRM9 215 aa11□□□□□ -0.65
PPP4R3B-206ENST00000616407 OR4C13Q8NGP0 309 aa11□□□□□ -0.65
PPP4R3B-206ENST00000616407 TMEM171Q8WVE6 324 aa11□□□□□ -0.65
PPP4R3B-206ENST00000616407 TMEM18Q96B42 140 aa11□□□□□ -0.65
PPP4R3B-206ENST00000616407 PLCE1Q9P212 2302 aa11□□□□□ -0.65
PPP4R3B-206ENST00000616407 TMEM11P17152 192 aa11□□□□□ -0.65
PPP4R3B-206ENST00000616407 ZNF596Q8TC21 504 aa11□□□□□ -0.65
PPP4R3B-206ENST00000616407 SAA2-SAA4A0A096LPE2 208 aa10.99□□□□□ -0.65
PPP4R3B-206ENST00000616407 PPIAL4CA0A0B4J2A2 164 aa10.99□□□□□ -0.65
PPP4R3B-206ENST00000616407 XKRY2A2RUG3 117 aa10.99□□□□□ -0.65
PPP4R3B-206ENST00000616407 HELTA6NFD8 242 aa10.99□□□□□ -0.65
PPP4R3B-206ENST00000616407 SAA2P0DJI9 122 aaPredicted RBP10.99□□□□□ -0.65
PPP4R3B-206ENST00000616407 CT45A10P0DMU9 189 aa10.99□□□□□ -0.65
PPP4R3B-206ENST00000616407 PPIAL4GP0DN37 164 aa10.99□□□□□ -0.65
PPP4R3B-206ENST00000616407 ARF6P62330 175 aa10.99□□□□□ -0.65
PPP4R3B-206ENST00000616407 C10orf113Q5VZT2 155 aa10.99□□□□□ -0.65
PPP4R3B-206ENST00000616407 DMRTA2Q96SC8 542 aa10.99□□□□□ -0.65
PPP4R3B-206ENST00000616407 ABCA1O95477 2261 aa10.99□□□□□ -0.65
PPP4R3B-206ENST00000616407 TM4SF5O14894 197 aa10.99□□□□□ -0.65
PPP4R3B-206ENST00000616407 GPR6P46095 362 aaPredicted RBP10.99□□□□□ -0.65
PPP4R3B-206ENST00000616407 RNF2Q99496 336 aa10.99□□□□□ -0.65
PPP4R3B-206ENST00000616407 KLRB1Q12918 225 aa10.99□□□□□ -0.65
PPP4R3B-206ENST00000616407 TMEM186Q96B77 213 aa10.99□□□□□ -0.65
PPP4R3B-206ENST00000616407 LPAR2Q9HBW0 351 aa10.99□□□□□ -0.65
PPP4R3B-206ENST00000616407 LINC00869P0C866 280 aa10.98□□□□□ -0.65
PPP4R3B-206ENST00000616407 ARL14EPLP0DKL9 152 aa10.98□□□□□ -0.65
PPP4R3B-206ENST00000616407 NTF3P20783 257 aa10.98□□□□□ -0.65
PPP4R3B-206ENST00000616407 TCL1AP56279 114 aa10.98□□□□□ -0.65
PPP4R3B-206ENST00000616407 ERVFRD-1P60508 538 aa10.98□□□□□ -0.65
PPP4R3B-206ENST00000616407 TMEM30BQ3MIR4 351 aa10.98□□□□□ -0.65
PPP4R3B-206ENST00000616407 ZNF343Q6P1L6 599 aa10.98□□□□□ -0.65
PPP4R3B-206ENST00000616407 SPNS3Q6ZMD2 512 aa10.98□□□□□ -0.65
PPP4R3B-206ENST00000616407 NAT8BQ9UHF3 227 aa10.98□□□□□ -0.65
PPP4R3B-206ENST00000616407 AUP1Q9Y679 476 aa10.98□□□□□ -0.65
PPP4R3B-206ENST00000616407 TRGC2P03986 189 aa10.98□□□□□ -0.65
PPP4R3B-206ENST00000616407 REG1AP05451 166 aa10.98□□□□□ -0.65
PPP4R3B-206ENST00000616407 USF1P22415 310 aaPredicted RBP10.98□□□□□ -0.65
PPP4R3B-206ENST00000616407 PCGF1Q9BSM1 259 aa10.98□□□□□ -0.65
PPP4R3B-206ENST00000616407 PARLQ9H300 379 aa10.98□□□□□ -0.65
PPP4R3B-206ENST00000616407 RALYQ9UKM9 306 aaKnown RBP10.98□□□□□ -0.65
PPP4R3B-206ENST00000616407 RAXQ9Y2V3 346 aa10.98□□□□□ -0.65
PPP4R3B-206ENST00000616407 CACNA1BQ00975 2339 aa10.98□□□□□ -0.65
PPP4R3B-206ENST00000616407 LAMA3Q16787 3333 aa10.98□□□□□ -0.65
PPP4R3B-206ENST00000616407 PHOX2AO14813 284 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms