RNA–Protein interactions for RNA: ENST00000616352.4

ACACA-238, Transcript of acetyl-CoA carboxylase alpha, human

TSL 1 (best)

Gene ACACA, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACACA-238	ENST00000616352	NMS	Q5H8A3	153 aa		18.31	■□□□□ 0.52
ACACA-238	ENST00000616352	C5orf56	Q8N8D9	126 aa		18.31	■□□□□ 0.52
ACACA-238	ENST00000616352	TEX45	Q8NA69	505 aa		18.31	■□□□□ 0.52
ACACA-238	ENST00000616352	VSTM2A	Q8TAG5	236 aa		18.31	■□□□□ 0.52
ACACA-238	ENST00000616352	LSM10	Q969L4	123 aa	Known RBP	18.31	■□□□□ 0.52
ACACA-238	ENST00000616352	FBXL15	Q9H469	300 aa		18.31	■□□□□ 0.52
ACACA-238	ENST00000616352	METTL1	Q9UBP6	276 aa	Known RBP	18.31	■□□□□ 0.52
ACACA-238	ENST00000616352	SIGLEC9	Q9Y336	463 aa		18.31	■□□□□ 0.52
ACACA-238	ENST00000616352		A0A0G2JRQ6	117 aa		18.3	■□□□□ 0.52
ACACA-238	ENST00000616352	NCBP2L	A6PVI3	153 aa	Known RBP	18.3	■□□□□ 0.52
ACACA-238	ENST00000616352	OR2A4	O95047	310 aa		18.3	■□□□□ 0.52
ACACA-238	ENST00000616352	MRGPRG-AS1	Q2M3A8	158 aa		18.3	■□□□□ 0.52
ACACA-238	ENST00000616352	OR2A7	Q96R45	310 aa		18.3	■□□□□ 0.52
ACACA-238	ENST00000616352	MMP24	Q9Y5R2	645 aa		18.3	■□□□□ 0.52
ACACA-238	ENST00000616352	JMJD1C	Q15652	2540 aa		18.3	■□□□□ 0.52
ACACA-238	ENST00000616352	SETD2	Q9BYW2	2564 aa	Predicted RBP	18.29	■□□□□ 0.52
ACACA-238	ENST00000616352	KBTBD11	O94819	623 aa		18.29	■□□□□ 0.52
ACACA-238	ENST00000616352	FAM219A	Q8IW50	185 aa		18.29	■□□□□ 0.52
ACACA-238	ENST00000616352	RRNAD1	Q96FB5	475 aa	Known RBP	18.29	■□□□□ 0.52
ACACA-238	ENST00000616352	TMED3	Q9Y3Q3	217 aa		18.29	■□□□□ 0.52
ACACA-238	ENST00000616352	ADAP1	O75689	374 aa		18.28	■□□□□ 0.52
ACACA-238	ENST00000616352	HOXB5	P09067	269 aa		18.28	■□□□□ 0.52
ACACA-238	ENST00000616352	OR9G9	P0C7N8	305 aa		18.28	■□□□□ 0.52
ACACA-238	ENST00000616352	H2BFWT	Q7Z2G1	175 aa		18.28	■□□□□ 0.52
ACACA-238	ENST00000616352	PPP1R27	Q86WC6	154 aa		18.28	■□□□□ 0.52
ACACA-238	ENST00000616352	TMEM167A	Q8TBQ9	72 aa		18.28	■□□□□ 0.52
ACACA-238	ENST00000616352	TRAV3	A0A0B4J244	114 aa		18.27	■□□□□ 0.52
ACACA-238	ENST00000616352		M0QZK8	103 aa		18.27	■□□□□ 0.52
ACACA-238	ENST00000616352	GPR137B	O60478	399 aa		18.27	■□□□□ 0.52
ACACA-238	ENST00000616352	IZUMO4	Q1ZYL8	232 aa		18.27	■□□□□ 0.52
ACACA-238	ENST00000616352	UXS1	Q8NBZ7	420 aa		18.27	■□□□□ 0.52
ACACA-238	ENST00000616352	OR4A5	Q8NH83	315 aa		18.27	■□□□□ 0.52
ACACA-238	ENST00000616352	GPR146	Q96CH1	333 aa		18.27	■□□□□ 0.52
ACACA-238	ENST00000616352	JMJD8	Q96S16	334 aa		18.27	■□□□□ 0.52
ACACA-238	ENST00000616352	RAB18	Q9NP72	206 aa		18.27	■□□□□ 0.52
ACACA-238	ENST00000616352	UPK2	O00526	184 aa		18.27	■□□□□ 0.51
ACACA-238	ENST00000616352	RNASE1	P07998	156 aa	Known RBP	18.27	■□□□□ 0.51
ACACA-238	ENST00000616352	PJVK	Q0ZLH3	352 aa		18.27	■□□□□ 0.51
ACACA-238	ENST00000616352	GGNBP1	Q5YKI7	109 aa		18.27	■□□□□ 0.51
ACACA-238	ENST00000616352		Q6ZRM9	215 aa		18.27	■□□□□ 0.51
ACACA-238	ENST00000616352	RNASE11	Q8TAA1	199 aa	Known RBP	18.27	■□□□□ 0.51
ACACA-238	ENST00000616352	ZNF430	Q9H8G1	570 aa	Predicted RBP	18.27	■□□□□ 0.51
ACACA-238	ENST00000616352	TCF21	O43680	179 aa		18.26	■□□□□ 0.51
ACACA-238	ENST00000616352	UBA52	P62987	128 aa	Known RBP	18.26	■□□□□ 0.51
ACACA-238	ENST00000616352	RELB	Q01201	579 aa		18.26	■□□□□ 0.51
ACACA-238	ENST00000616352	PLGLA	Q15195	96 aa		18.26	■□□□□ 0.51
ACACA-238	ENST00000616352	PRSS8	Q16651	343 aa		18.26	■□□□□ 0.51
ACACA-238	ENST00000616352	C2orf68	Q2NKX9	166 aa		18.26	■□□□□ 0.51
ACACA-238	ENST00000616352	C2CD3	Q4AC94	2353 aa		18.26	■□□□□ 0.51
ACACA-238	ENST00000616352	MPTX1	A8MV57	137 aa		18.25	■□□□□ 0.51
ACACA-238	ENST00000616352	FCN1	O00602	326 aa		18.25	■□□□□ 0.51
ACACA-238	ENST00000616352	SSNA1	O43805	119 aa		18.25	■□□□□ 0.51
ACACA-238	ENST00000616352	HLA-DRB1	P01911	266 aa		18.25	■□□□□ 0.51
ACACA-238	ENST00000616352	FGF2	P09038	288 aa		18.25	■□□□□ 0.51
ACACA-238	ENST00000616352	HLA-G	P17693	338 aa		18.25	■□□□□ 0.51
ACACA-238	ENST00000616352	SSBP2	P81877	361 aa	Predicted RBP	18.25	■□□□□ 0.51
ACACA-238	ENST00000616352	RASL11B	Q9BPW5	248 aa		18.25	■□□□□ 0.51
ACACA-238	ENST00000616352	MMD2	Q8IY49	270 aa		18.24	■□□□□ 0.51
ACACA-238	ENST00000616352	RANBP3	Q9H6Z4	567 aa	Predicted RBP	18.24	■□□□□ 0.51
ACACA-238	ENST00000616352	CACNG5	Q9UF02	275 aa		18.24	■□□□□ 0.51
ACACA-238	ENST00000616352	NSG2	Q9Y328	171 aa		18.24	■□□□□ 0.51
ACACA-238	ENST00000616352	CCS	O14618	274 aa		18.23	■□□□□ 0.51
ACACA-238	ENST00000616352	IFNA21	P01568	189 aa		18.23	■□□□□ 0.51
ACACA-238	ENST00000616352	SLC25A6	P12236	298 aa		18.23	■□□□□ 0.51
ACACA-238	ENST00000616352	RPL8	P62917	257 aa	Known RBP	18.23	■□□□□ 0.51
ACACA-238	ENST00000616352	BLCAP	P62952	87 aa		18.23	■□□□□ 0.51
ACACA-238	ENST00000616352	CLCC1	Q96S66	551 aa		18.23	■□□□□ 0.51
ACACA-238	ENST00000616352	TMEM14B	Q9NUH8	114 aa		18.23	■□□□□ 0.51
ACACA-238	ENST00000616352	COA4	Q9NYJ1	87 aa		18.23	■□□□□ 0.51
ACACA-238	ENST00000616352		A0A1B0GU03	582 aa		18.23	■□□□□ 0.51
ACACA-238	ENST00000616352	FAM181B	A6NEQ2	426 aa		18.23	■□□□□ 0.51
ACACA-238	ENST00000616352	SH2D7	A6NKC9	451 aa	Predicted RBP	18.23	■□□□□ 0.51
ACACA-238	ENST00000616352	C15orf61	A6NNL5	157 aa		18.23	■□□□□ 0.51
ACACA-238	ENST00000616352	CA2	P00918	260 aa		18.23	■□□□□ 0.51
ACACA-238	ENST00000616352	FOXRED2	Q8IWF2	684 aa		18.23	■□□□□ 0.51
ACACA-238	ENST00000616352	OR10C1	Q96KK4	312 aa		18.23	■□□□□ 0.51
ACACA-238	ENST00000616352	SNAPC5	O75971	98 aa		18.22	■□□□□ 0.51
ACACA-238	ENST00000616352	SULT1A3	P0DMM9	295 aa		18.22	■□□□□ 0.51
ACACA-238	ENST00000616352	SULT1A4	P0DMN0	295 aa		18.22	■□□□□ 0.51
ACACA-238	ENST00000616352	OR2B8P	P59922	312 aa		18.22	■□□□□ 0.51
ACACA-238	ENST00000616352	RPL15	P61313	204 aa	Known RBP	18.22	■□□□□ 0.51
ACACA-238	ENST00000616352	SMCO1	Q147U7	214 aa		18.22	■□□□□ 0.51
ACACA-238	ENST00000616352	AARD	Q4LEZ3	155 aa		18.22	■□□□□ 0.51
ACACA-238	ENST00000616352	ZNF562	Q6V9R5	426 aa		18.22	■□□□□ 0.51
ACACA-238	ENST00000616352	OR5M8	Q8NGP6	311 aa		18.22	■□□□□ 0.51
ACACA-238	ENST00000616352	HSPB9	Q9BQS6	159 aa		18.22	■□□□□ 0.51
ACACA-238	ENST00000616352	FOXA2	Q9Y261	457 aa	Predicted RBP	18.22	■□□□□ 0.51
ACACA-238	ENST00000616352	IGHV7-81	A0A0B4J1V7	117 aa		18.21	■□□□□ 0.51
ACACA-238	ENST00000616352	PITX3	O75364	302 aa		18.21	■□□□□ 0.51
ACACA-238	ENST00000616352	RRAS2	P62070	204 aa	Predicted RBP	18.21	■□□□□ 0.51
ACACA-238	ENST00000616352	ZNF429	Q86V71	674 aa		18.21	■□□□□ 0.51
ACACA-238	ENST00000616352	OR4A16	Q8NH70	328 aa		18.21	■□□□□ 0.51
ACACA-238	ENST00000616352	NPFFR1	Q9GZQ6	430 aa		18.21	■□□□□ 0.51
ACACA-238	ENST00000616352	MED28	Q9H204	178 aa		18.21	■□□□□ 0.51
ACACA-238	ENST00000616352	PRND	Q9UKY0	176 aa		18.21	■□□□□ 0.51
ACACA-238	ENST00000616352	GOSR2	O14653	212 aa		18.2	■□□□□ 0.5
ACACA-238	ENST00000616352	MYOD1	P15172	320 aa		18.2	■□□□□ 0.5
ACACA-238	ENST00000616352	MAS1L	P35410	378 aa		18.2	■□□□□ 0.5
ACACA-238	ENST00000616352	CX3CL1	P78423	397 aa		18.2	■□□□□ 0.5
ACACA-238	ENST00000616352	NDP	Q00604	133 aa		18.2	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms