RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 ZFAND5O76080 213 aa11.5□□□□□ -0.57
PPP4R3B-205ENST00000616288 FTH1P19P0C7X4 201 aa11.5□□□□□ -0.57
PPP4R3B-205ENST00000616288 CFPP27918 469 aa11.5□□□□□ -0.57
PPP4R3B-205ENST00000616288 GFERP55789 205 aa11.5□□□□□ -0.57
PPP4R3B-205ENST00000616288 PGLYRP4Q96LB8 373 aa11.5□□□□□ -0.57
PPP4R3B-205ENST00000616288 TAAR6Q96RI8 345 aa11.5□□□□□ -0.57
PPP4R3B-205ENST00000616288 TRAV9-1A0A075B6T8 112 aa11.5□□□□□ -0.57
PPP4R3B-205ENST00000616288 P01737 135 aa11.5□□□□□ -0.57
PPP4R3B-205ENST00000616288 LIPFP07098 398 aa11.5□□□□□ -0.57
PPP4R3B-205ENST00000616288 CTGFP29279 349 aa11.5□□□□□ -0.57
PPP4R3B-205ENST00000616288 OR13H1Q8NG92 308 aa11.5□□□□□ -0.57
PPP4R3B-205ENST00000616288 EAF1Q96JC9 268 aaPredicted RBP11.5□□□□□ -0.57
PPP4R3B-205ENST00000616288 CITED1Q99966 193 aa11.5□□□□□ -0.57
PPP4R3B-205ENST00000616288 LSM4Q9Y4Z0 139 aaKnown RBP11.5□□□□□ -0.57
PPP4R3B-205ENST00000616288 C22orf46C9J442 243 aa11.49□□□□□ -0.57
PPP4R3B-205ENST00000616288 MYF5P13349 255 aa11.49□□□□□ -0.57
PPP4R3B-205ENST00000616288 RPL15P61313 204 aaKnown RBP11.49□□□□□ -0.57
PPP4R3B-205ENST00000616288 Q0VG73 95 aa11.49□□□□□ -0.57
PPP4R3B-205ENST00000616288 TTC32Q5I0X7 151 aa11.49□□□□□ -0.57
PPP4R3B-205ENST00000616288 SAMD5Q5TGI4 173 aa11.49□□□□□ -0.57
PPP4R3B-205ENST00000616288 VSTM2AQ8TAG5 236 aa11.49□□□□□ -0.57
PPP4R3B-205ENST00000616288 TRAV8-6A0A0B4J262 113 aa11.49□□□□□ -0.57
PPP4R3B-205ENST00000616288 MRPL33O75394 65 aaKnown RBP11.49□□□□□ -0.57
PPP4R3B-205ENST00000616288 TOMM40O96008 361 aa11.49□□□□□ -0.57
PPP4R3B-205ENST00000616288 CEACAM21Q3KPI0 293 aa11.49□□□□□ -0.57
PPP4R3B-205ENST00000616288 BVES-AS1Q5T3Y7 98 aa11.49□□□□□ -0.57
PPP4R3B-205ENST00000616288 ATP23Q9Y6H3 246 aa11.49□□□□□ -0.57
PPP4R3B-205ENST00000616288 ABCA1O95477 2261 aa11.49□□□□□ -0.57
PPP4R3B-205ENST00000616288 TNFSF15O95150 251 aa11.49□□□□□ -0.57
PPP4R3B-205ENST00000616288 TMEM177Q53S58 311 aa11.49□□□□□ -0.57
PPP4R3B-205ENST00000616288 SH2D7A6NKC9 451 aaPredicted RBP11.49□□□□□ -0.57
PPP4R3B-205ENST00000616288 SMIM10L1P0DMW3 83 aa11.49□□□□□ -0.57
PPP4R3B-205ENST00000616288 SSTR5P35346 364 aa11.49□□□□□ -0.57
PPP4R3B-205ENST00000616288 KIR3DS1Q14943 382 aa11.49□□□□□ -0.57
PPP4R3B-205ENST00000616288 SPATA46Q5T0L3 261 aa11.49□□□□□ -0.57
PPP4R3B-205ENST00000616288 SFTA2Q6UW10 78 aa11.49□□□□□ -0.57
PPP4R3B-205ENST00000616288 SMIM10Q96HG1 83 aa11.49□□□□□ -0.57
PPP4R3B-205ENST00000616288 CHRNA10Q9GZZ6 450 aa11.49□□□□□ -0.57
PPP4R3B-205ENST00000616288 NHP2Q9NX24 153 aaKnown RBP11.49□□□□□ -0.57
PPP4R3B-205ENST00000616288 KBTBD11-OT1A0A1B0GTJ5 212 aa11.48□□□□□ -0.57
PPP4R3B-205ENST00000616288 SPINT1O43278 529 aa11.48□□□□□ -0.57
PPP4R3B-205ENST00000616288 NGFP01138 241 aa11.48□□□□□ -0.57
PPP4R3B-205ENST00000616288 TEPPQ6URK8 271 aa11.48□□□□□ -0.57
PPP4R3B-205ENST00000616288 SARAFQ96BY9 339 aa11.48□□□□□ -0.57
PPP4R3B-205ENST00000616288 SS18L2Q9UHA2 77 aa11.48□□□□□ -0.57
PPP4R3B-205ENST00000616288 R4GN57 208 aa11.48□□□□□ -0.57
PPP4R3B-205ENST00000616288 CT45A6P0DMU7 189 aa11.48□□□□□ -0.57
PPP4R3B-205ENST00000616288 CT45A5P0DMU8 189 aa11.48□□□□□ -0.57
PPP4R3B-205ENST00000616288 CT45A7P0DMV0 189 aa11.48□□□□□ -0.57
PPP4R3B-205ENST00000616288 ZP4Q12836 540 aa11.48□□□□□ -0.57
PPP4R3B-205ENST00000616288 NMSQ5H8A3 153 aa11.48□□□□□ -0.57
PPP4R3B-205ENST00000616288 CT45A1Q5HYN5 189 aa11.48□□□□□ -0.57
PPP4R3B-205ENST00000616288 CT45A3Q8NHU0 189 aa11.48□□□□□ -0.57
PPP4R3B-205ENST00000616288 SRSF8Q9BRL6 282 aaKnown RBP11.48□□□□□ -0.57
PPP4R3B-205ENST00000616288 A0A0G2JRQ6 117 aa11.48□□□□□ -0.57
PPP4R3B-205ENST00000616288 COL8A1P27658 744 aa11.48□□□□□ -0.57
PPP4R3B-205ENST00000616288 CRYBA4P53673 196 aa11.48□□□□□ -0.57
PPP4R3B-205ENST00000616288 YPEL3P61236 119 aaPredicted RBP11.48□□□□□ -0.57
PPP4R3B-205ENST00000616288 ADAMTSL5Q6ZMM2 481 aa11.48□□□□□ -0.57
PPP4R3B-205ENST00000616288 ZNF721Q8TF20 911 aa11.48□□□□□ -0.57
PPP4R3B-205ENST00000616288 CEP350Q5VT06 3117 aa11.48□□□□□ -0.57
PPP4R3B-205ENST00000616288 CYC1P08574 325 aa11.47□□□□□ -0.57
PPP4R3B-205ENST00000616288 MEF2CQ06413 473 aaPredicted RBP11.47□□□□□ -0.57
PPP4R3B-205ENST00000616288 LSM10Q969L4 123 aaKnown RBP11.47□□□□□ -0.57
PPP4R3B-205ENST00000616288 B4GALT7Q9UBV7 327 aa11.47□□□□□ -0.57
PPP4R3B-205ENST00000616288 IGKV1D-33P01593 117 aa11.47□□□□□ -0.57
PPP4R3B-205ENST00000616288 IGKV1-33P01594 117 aa11.47□□□□□ -0.57
PPP4R3B-205ENST00000616288 CISD3P0C7P0 127 aa11.47□□□□□ -0.57
PPP4R3B-205ENST00000616288 ZFP36L1Q07352 338 aaKnown RBP11.47□□□□□ -0.57
PPP4R3B-205ENST00000616288 ZNF418Q8TF45 676 aaPredicted RBP11.47□□□□□ -0.57
PPP4R3B-205ENST00000616288 C10orf35Q96D05 121 aa11.47□□□□□ -0.57
PPP4R3B-205ENST00000616288 S1PR3Q99500 378 aa11.47□□□□□ -0.57
PPP4R3B-205ENST00000616288 PLXNB3Q9ULL4 1909 aa11.47□□□□□ -0.57
PPP4R3B-205ENST00000616288 A0A1B0GW15 77 aa11.46□□□□□ -0.57
PPP4R3B-205ENST00000616288 C5orf63A6NC05 138 aa11.46□□□□□ -0.57
PPP4R3B-205ENST00000616288 CEBPDP49716 269 aaPredicted RBP11.46□□□□□ -0.57
PPP4R3B-205ENST00000616288 PSG3Q16557 428 aa11.46□□□□□ -0.57
PPP4R3B-205ENST00000616288 OR2M7Q8NG81 312 aa11.46□□□□□ -0.57
PPP4R3B-205ENST00000616288 ELSPBP1Q96BH3 223 aa11.46□□□□□ -0.57
PPP4R3B-205ENST00000616288 AP5S1Q9NUS5 200 aa11.46□□□□□ -0.57
PPP4R3B-205ENST00000616288 ZNF106Q9H2Y7 1883 aaKnown RBP11.46□□□□□ -0.57
PPP4R3B-205ENST00000616288 GAGE12HA6NDE8 117 aa11.46□□□□□ -0.57
PPP4R3B-205ENST00000616288 C17orf99Q6UX52 265 aa11.46□□□□□ -0.57
PPP4R3B-205ENST00000616288 LINC00696Q6ZRV3 163 aa11.46□□□□□ -0.57
PPP4R3B-205ENST00000616288 KIAA1671Q9BY89 1806 aa11.46□□□□□ -0.57
PPP4R3B-205ENST00000616288 A0A1W2PRE2 83 aa11.46□□□□□ -0.58
PPP4R3B-205ENST00000616288 C19orf67A6NJJ6 358 aa11.46□□□□□ -0.58
PPP4R3B-205ENST00000616288 TGFBR3LH3BV60 316 aa11.46□□□□□ -0.58
PPP4R3B-205ENST00000616288 FOXS1O43638 330 aa11.46□□□□□ -0.58
PPP4R3B-205ENST00000616288 OR2J3O76001 311 aa11.46□□□□□ -0.58
PPP4R3B-205ENST00000616288 C9orf40Q8IXQ3 194 aa11.46□□□□□ -0.58
PPP4R3B-205ENST00000616288 FAM169BQ8N8A8 192 aa11.46□□□□□ -0.58
PPP4R3B-205ENST00000616288 OR4A5Q8NH83 315 aa11.46□□□□□ -0.58
PPP4R3B-205ENST00000616288 FLYWCH2Q96CP2 140 aaKnown RBP11.46□□□□□ -0.58
PPP4R3B-205ENST00000616288 FOXB1Q99853 325 aa11.46□□□□□ -0.58
PPP4R3B-205ENST00000616288 NPVFQ9HCQ7 196 aa11.46□□□□□ -0.58
PPP4R3B-205ENST00000616288 TNFSF11O14788 317 aa11.46□□□□□ -0.58
PPP4R3B-205ENST00000616288 MMP23AO75900 390 aa11.46□□□□□ -0.58
PPP4R3B-205ENST00000616288 LGALS4P56470 323 aa11.46□□□□□ -0.58
PPP4R3B-205ENST00000616288 SLC35E4Q6ICL7 350 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms