RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 CNIH2Q6PI25 160 aa15.66■□□□□ 0.1
TRAPPC3-208ENST00000616074 PUSL1Q8N0Z8 303 aaKnown RBP15.66■□□□□ 0.1
TRAPPC3-208ENST00000616074 OR4S2Q8NH73 311 aa15.66■□□□□ 0.1
TRAPPC3-208ENST00000616074 TCTEX1D2Q8WW35 142 aa15.66■□□□□ 0.1
TRAPPC3-208ENST00000616074 OR2A7Q96R45 310 aa15.66■□□□□ 0.1
TRAPPC3-208ENST00000616074 VCX3BQ9H321 246 aa15.66■□□□□ 0.1
TRAPPC3-208ENST00000616074 ZC4H2Q9NQZ6 224 aa15.66■□□□□ 0.1
TRAPPC3-208ENST00000616074 FBXL7Q9UJT9 491 aa15.66■□□□□ 0.1
TRAPPC3-208ENST00000616074 SPATA2Q9UM82 520 aa15.66■□□□□ 0.1
TRAPPC3-208ENST00000616074 ALMS1Q8TCU4 4167 aa15.65■□□□□ 0.1
TRAPPC3-208ENST00000616074 A0A1B0GW64 132 aa15.65■□□□□ 0.1
TRAPPC3-208ENST00000616074 RBMY1BA6NDE4 496 aaKnown RBP15.65■□□□□ 0.1
TRAPPC3-208ENST00000616074 RBMY1EA6NEQ0 496 aaKnown RBP15.65■□□□□ 0.1
TRAPPC3-208ENST00000616074 NPIPB5A8MRT5 1133 aa15.65■□□□□ 0.1
TRAPPC3-208ENST00000616074 NOTOA8MTQ0 251 aa15.65■□□□□ 0.1
TRAPPC3-208ENST00000616074 SSX5O60225 188 aa15.65■□□□□ 0.1
TRAPPC3-208ENST00000616074 GGCTO75223 188 aaKnown RBP15.65■□□□□ 0.1
TRAPPC3-208ENST00000616074 OR2C1O95371 312 aa15.65■□□□□ 0.1
TRAPPC3-208ENST00000616074 IGHV3-23P01764 117 aa15.65■□□□□ 0.1
TRAPPC3-208ENST00000616074 RBMY1DP0C7P1 496 aaKnown RBP15.65■□□□□ 0.1
TRAPPC3-208ENST00000616074 KIR2DS2P43631 304 aa15.65■□□□□ 0.1
TRAPPC3-208ENST00000616074 RPL27AP46776 148 aaKnown RBP15.65■□□□□ 0.1
TRAPPC3-208ENST00000616074 HSPA13P48723 471 aa15.65■□□□□ 0.1
TRAPPC3-208ENST00000616074 GUCA2BQ16661 112 aa15.65■□□□□ 0.1
TRAPPC3-208ENST00000616074 FAM209BQ5JX69 171 aa15.65■□□□□ 0.1
TRAPPC3-208ENST00000616074 VSTM2AQ8TAG5 236 aa15.65■□□□□ 0.1
TRAPPC3-208ENST00000616074 TMEM167AQ8TBQ9 72 aa15.65■□□□□ 0.1
TRAPPC3-208ENST00000616074 FYTTD1Q96QD9 318 aaKnown RBP15.65■□□□□ 0.1
TRAPPC3-208ENST00000616074 HSD17B10Q99714 261 aaKnown RBP15.65■□□□□ 0.1
TRAPPC3-208ENST00000616074 SRD5A3Q9H8P0 318 aa15.65■□□□□ 0.1
TRAPPC3-208ENST00000616074 ANXA10Q9UJ72 324 aa15.65■□□□□ 0.1
TRAPPC3-208ENST00000616074 DPPA5A6NC42 116 aa15.64■□□□□ 0.09
TRAPPC3-208ENST00000616074 LGALS9O00182 355 aa15.64■□□□□ 0.09
TRAPPC3-208ENST00000616074 ZNF735P0CB33 412 aa15.64■□□□□ 0.09
TRAPPC3-208ENST00000616074 GNG2P59768 71 aa15.64■□□□□ 0.09
TRAPPC3-208ENST00000616074 MFSD4AQ8N468 514 aa15.64■□□□□ 0.09
TRAPPC3-208ENST00000616074 CACNG8Q8WXS5 425 aa15.64■□□□□ 0.09
TRAPPC3-208ENST00000616074 WDR89Q96FK6 387 aaPredicted RBP15.64■□□□□ 0.09
TRAPPC3-208ENST00000616074 CCDC140Q96MF4 163 aa15.64■□□□□ 0.09
TRAPPC3-208ENST00000616074 FANCD2OSQ96PS1 177 aa15.64■□□□□ 0.09
TRAPPC3-208ENST00000616074 GPHA2Q96T91 129 aa15.64■□□□□ 0.09
TRAPPC3-208ENST00000616074 SLC2A9Q9NRM0 540 aa15.64■□□□□ 0.09
TRAPPC3-208ENST00000616074 TXNL4BQ9NX01 149 aaKnown RBP15.64■□□□□ 0.09
TRAPPC3-208ENST00000616074 TAS2R8Q9NYW2 309 aa15.64■□□□□ 0.09
TRAPPC3-208ENST00000616074 SELENOKQ9Y6D0 94 aa15.64■□□□□ 0.09
TRAPPC3-208ENST00000616074 S4R3C0 116 aa15.64■□□□□ 0.09
TRAPPC3-208ENST00000616074 OR11H12B2RN74 326 aa15.63■□□□□ 0.09
TRAPPC3-208ENST00000616074 NDUFB8O95169 186 aa15.63■□□□□ 0.09
TRAPPC3-208ENST00000616074 AREGP15514 252 aa15.63■□□□□ 0.09
TRAPPC3-208ENST00000616074 TECRQ9NZ01 308 aaKnown RBP15.63■□□□□ 0.09
TRAPPC3-208ENST00000616074 DAPK2Q9UIK4 370 aa15.63■□□□□ 0.09
TRAPPC3-208ENST00000616074 CRYGCP07315 174 aa15.62■□□□□ 0.09
TRAPPC3-208ENST00000616074 MYOD1P15172 320 aa15.62■□□□□ 0.09
TRAPPC3-208ENST00000616074 FGF9P31371 208 aaPredicted RBP15.62■□□□□ 0.09
TRAPPC3-208ENST00000616074 MAS1LP35410 378 aa15.62■□□□□ 0.09
TRAPPC3-208ENST00000616074 ARL3P36405 182 aa15.62■□□□□ 0.09
TRAPPC3-208ENST00000616074 GABARAPL2P60520 117 aa15.62■□□□□ 0.09
TRAPPC3-208ENST00000616074 UBE2UQ5VVX9 321 aa15.62■□□□□ 0.09
TRAPPC3-208ENST00000616074 CLEC19AQ6UXS0 136 aa15.62■□□□□ 0.09
TRAPPC3-208ENST00000616074 SSX9Q7RTT3 188 aa15.62■□□□□ 0.09
TRAPPC3-208ENST00000616074 GPHB5Q86YW7 130 aa15.62■□□□□ 0.09
TRAPPC3-208ENST00000616074 LGALS14Q8TCE9 139 aa15.62■□□□□ 0.09
TRAPPC3-208ENST00000616074 SCGNO76038 276 aa15.61■□□□□ 0.09
TRAPPC3-208ENST00000616074 CBLN1P23435 193 aa15.61■□□□□ 0.09
TRAPPC3-208ENST00000616074 PSMB6P28072 239 aa15.61■□□□□ 0.09
TRAPPC3-208ENST00000616074 ZNF66Q6ZN08 573 aa15.61■□□□□ 0.09
TRAPPC3-208ENST00000616074 IL17DQ8TAD2 202 aa15.61■□□□□ 0.09
TRAPPC3-208ENST00000616074 RRP15Q9Y3B9 282 aaKnown RBP15.61■□□□□ 0.09
TRAPPC3-208ENST00000616074 TMEM213A2RRL7 107 aa15.6■□□□□ 0.09
TRAPPC3-208ENST00000616074 TNFSF12O43508 249 aa15.6■□□□□ 0.09
TRAPPC3-208ENST00000616074 JTBO76095 146 aa15.6■□□□□ 0.09
TRAPPC3-208ENST00000616074 REG1AP05451 166 aa15.6■□□□□ 0.09
TRAPPC3-208ENST00000616074 CTRB1P17538 263 aa15.6■□□□□ 0.09
TRAPPC3-208ENST00000616074 PSMB9P28065 219 aa15.6■□□□□ 0.09
TRAPPC3-208ENST00000616074 RPL8P62917 257 aaKnown RBP15.6■□□□□ 0.09
TRAPPC3-208ENST00000616074 KLK9Q2XQG4 91 aa15.6■□□□□ 0.09
TRAPPC3-208ENST00000616074 CTRB2Q6GPI1 263 aa15.6■□□□□ 0.09
TRAPPC3-208ENST00000616074 SFXN4Q6P4A7 337 aa15.6■□□□□ 0.09
TRAPPC3-208ENST00000616074 TPRA1Q86W33 373 aa15.6■□□□□ 0.09
TRAPPC3-208ENST00000616074 TMEM61Q8N0U2 210 aa15.6■□□□□ 0.09
TRAPPC3-208ENST00000616074 EEF1AKMT3Q96AZ1 226 aa15.6■□□□□ 0.09
TRAPPC3-208ENST00000616074 CCL28Q9NRJ3 127 aa15.6■□□□□ 0.09
TRAPPC3-208ENST00000616074 KLK9Q9UKQ9 250 aa15.6■□□□□ 0.09
TRAPPC3-208ENST00000616074 RAB26Q9ULW5 256 aa15.6■□□□□ 0.09
TRAPPC3-208ENST00000616074 CGB1A6NKQ9 187 aa15.59■□□□□ 0.09
TRAPPC3-208ENST00000616074 A8MWP6 167 aa15.59■□□□□ 0.09
TRAPPC3-208ENST00000616074 MRPS14O60783 128 aaKnown RBP15.59■□□□□ 0.09
TRAPPC3-208ENST00000616074 HRASP01112 189 aa15.59■□□□□ 0.09
TRAPPC3-208ENST00000616074 PTHLHP12272 177 aa15.59■□□□□ 0.09
TRAPPC3-208ENST00000616074 SPARTQ8N0X7 666 aa15.59■□□□□ 0.09
TRAPPC3-208ENST00000616074 SECTM1Q8WVN6 248 aa15.59■□□□□ 0.09
TRAPPC3-208ENST00000616074 RHBDL2Q9NX52 303 aa15.59■□□□□ 0.09
TRAPPC3-208ENST00000616074 MLXQ9UH92 298 aa15.59■□□□□ 0.09
TRAPPC3-208ENST00000616074 ZNF320A2RRD8 509 aa15.58■□□□□ 0.08
TRAPPC3-208ENST00000616074 MFSD2BA6NFX1 497 aa15.58■□□□□ 0.08
TRAPPC3-208ENST00000616074 DHFRP00374 187 aa15.58■□□□□ 0.08
TRAPPC3-208ENST00000616074 HIST1H1BP16401 226 aaKnown RBP15.58■□□□□ 0.08
TRAPPC3-208ENST00000616074 HLA-GP17693 338 aa15.58■□□□□ 0.08
TRAPPC3-208ENST00000616074 ARPC4P59998 168 aa15.58■□□□□ 0.08
TRAPPC3-208ENST00000616074 TIMM50Q3ZCQ8 353 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 149.7 ms