RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 FBXL17Q9UF56 701 aa8.72□□□□□ -1.01
COL4A1-205ENST00000615732 MIOXQ9UGB7 285 aa8.72□□□□□ -1.01
COL4A1-205ENST00000615732 SAA2-SAA4A0A096LPE2 208 aa8.71□□□□□ -1.02
COL4A1-205ENST00000615732 LINC00473A8K010 186 aa8.71□□□□□ -1.02
COL4A1-205ENST00000615732 GPR37O15354 613 aa8.71□□□□□ -1.02
COL4A1-205ENST00000615732 RBFOX2O43251 390 aaKnown RBP eCLIP8.71□□□□□ -1.02
COL4A1-205ENST00000615732 RAMP3O60896 148 aa8.71□□□□□ -1.02
COL4A1-205ENST00000615732 PITX3O75364 302 aa8.71□□□□□ -1.02
COL4A1-205ENST00000615732 RBMXL2O75526 392 aaKnown RBP8.71□□□□□ -1.02
COL4A1-205ENST00000615732 MMP23AO75900 390 aa8.71□□□□□ -1.02
COL4A1-205ENST00000615732 HPRT1P00492 218 aa8.71□□□□□ -1.02
COL4A1-205ENST00000615732 KRASP01116 189 aa8.71□□□□□ -1.02
COL4A1-205ENST00000615732 SAA2P0DJI9 122 aaPredicted RBP8.71□□□□□ -1.02
COL4A1-205ENST00000615732 ZNF134P52741 427 aa8.71□□□□□ -1.02
COL4A1-205ENST00000615732 ID3Q02535 119 aa8.71□□□□□ -1.02
COL4A1-205ENST00000615732 RUSC1-AS1Q66K80 236 aa8.71□□□□□ -1.02
COL4A1-205ENST00000615732 NCR3LG1Q68D85 454 aa8.71□□□□□ -1.02
COL4A1-205ENST00000615732 EIF5AL1Q6IS14 154 aaKnown RBP8.71□□□□□ -1.02
COL4A1-205ENST00000615732 BAP18Q8IXM2 172 aa8.71□□□□□ -1.02
COL4A1-205ENST00000615732 ZNF439Q8NDP4 499 aa8.71□□□□□ -1.02
COL4A1-205ENST00000615732 DMBX1Q8NFW5 382 aa8.71□□□□□ -1.02
COL4A1-205ENST00000615732 R3HDM4Q96D70 268 aa8.71□□□□□ -1.02
COL4A1-205ENST00000615732 RAB40CQ96S21 281 aa8.71□□□□□ -1.02
COL4A1-205ENST00000615732 RPS10-NUDT3A0A1W2PQS6 291 aa8.7□□□□□ -1.02
COL4A1-205ENST00000615732 FAM24AA6NFZ4 105 aa8.7□□□□□ -1.02
COL4A1-205ENST00000615732 C22orf46C9J442 243 aa8.7□□□□□ -1.02
COL4A1-205ENST00000615732 FAM90A26D6RGX4 464 aa8.7□□□□□ -1.02
COL4A1-205ENST00000615732 TOR1AO14656 332 aa8.7□□□□□ -1.02
COL4A1-205ENST00000615732 HOXA3O43365 443 aaPredicted RBP8.7□□□□□ -1.02
COL4A1-205ENST00000615732 GAPDHP04406 335 aaKnown RBP8.7□□□□□ -1.02
COL4A1-205ENST00000615732 IL3RAP26951 378 aa8.7□□□□□ -1.02
COL4A1-205ENST00000615732 EWSR1Q01844 656 aaKnown RBP eCLIP8.7□□□□□ -1.02
COL4A1-205ENST00000615732 BAXQ07812 192 aa8.7□□□□□ -1.02
COL4A1-205ENST00000615732 IZUMO4Q1ZYL8 232 aa8.7□□□□□ -1.02
COL4A1-205ENST00000615732 DEFB112Q30KQ8 113 aa8.7□□□□□ -1.02
COL4A1-205ENST00000615732 SLC25A48Q6ZT89 311 aaKnown RBP8.7□□□□□ -1.02
COL4A1-205ENST00000615732 STX12Q86Y82 276 aa8.7□□□□□ -1.02
COL4A1-205ENST00000615732 PDZD9Q8IXQ8 264 aa8.7□□□□□ -1.02
COL4A1-205ENST00000615732 OR10X1Q8NGY0 326 aa8.7□□□□□ -1.02
COL4A1-205ENST00000615732 PCNPQ8WW12 178 aaKnown RBP8.7□□□□□ -1.02
COL4A1-205ENST00000615732 SLC25A32Q9H2D1 315 aa8.7□□□□□ -1.02
COL4A1-205ENST00000615732 CYTL1Q9NRR1 136 aa8.7□□□□□ -1.02
COL4A1-205ENST00000615732 LYRM2Q9NU23 88 aaPredicted RBP8.7□□□□□ -1.02
COL4A1-205ENST00000615732 COA4Q9NYJ1 87 aa8.7□□□□□ -1.02
COL4A1-205ENST00000615732 PFDN2Q9UHV9 154 aa8.7□□□□□ -1.02
COL4A1-205ENST00000615732 SESN1Q9Y6P5 492 aa8.7□□□□□ -1.02
COL4A1-205ENST00000615732 hCG_1809904A0A1W2PP81 198 aa8.69□□□□□ -1.02
COL4A1-205ENST00000615732 A0A1W2PPE2 198 aa8.69□□□□□ -1.02
COL4A1-205ENST00000615732 A0A1W2PR64 198 aa8.69□□□□□ -1.02
COL4A1-205ENST00000615732 A0A1W2PRV1 198 aa8.69□□□□□ -1.02
COL4A1-205ENST00000615732 LINC00862A6NCI5 91 aa8.69□□□□□ -1.02
COL4A1-205ENST00000615732 CLDN34H7C241 214 aa8.69□□□□□ -1.02
COL4A1-205ENST00000615732 SYNGR2O43760 224 aa8.69□□□□□ -1.02
COL4A1-205ENST00000615732 CHST1O43916 411 aa8.69□□□□□ -1.02
COL4A1-205ENST00000615732 FCN3O75636 299 aa8.69□□□□□ -1.02
COL4A1-205ENST00000615732 JTBO76095 146 aa8.69□□□□□ -1.02
COL4A1-205ENST00000615732 APOA2P02652 100 aa8.69□□□□□ -1.02
COL4A1-205ENST00000615732 IAPPP10997 89 aa8.69□□□□□ -1.02
COL4A1-205ENST00000615732 RTL8BQ17RB0 113 aa8.69□□□□□ -1.02
COL4A1-205ENST00000615732 RPL7L1Q6DKI1 246 aaKnown RBP8.69□□□□□ -1.02
COL4A1-205ENST00000615732 Q6ZRM9 215 aa8.69□□□□□ -1.02
COL4A1-205ENST00000615732 C9orf139Q6ZV77 190 aa8.69□□□□□ -1.02
COL4A1-205ENST00000615732 COMMD7Q86VX2 200 aa8.69□□□□□ -1.02
COL4A1-205ENST00000615732 ZDHHC16Q969W1 377 aa8.69□□□□□ -1.02
COL4A1-205ENST00000615732 CLCC1Q96S66 551 aa8.69□□□□□ -1.02
COL4A1-205ENST00000615732 C11orf1Q9H5F2 150 aa8.69□□□□□ -1.02
COL4A1-205ENST00000615732 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.69□□□□□ -1.02
COL4A1-205ENST00000615732 NOTCH1P46531 2555 aa8.69□□□□□ -1.02
COL4A1-205ENST00000615732 IGSF23A1L1A6 192 aa8.68□□□□□ -1.02
COL4A1-205ENST00000615732 FAM181BA6NEQ2 426 aa8.68□□□□□ -1.02
COL4A1-205ENST00000615732 MARCH11A6NNE9 402 aa8.68□□□□□ -1.02
COL4A1-205ENST00000615732 CRYZL1O95825 349 aa8.68□□□□□ -1.02
COL4A1-205ENST00000615732 PPIAL4GP0DN37 164 aa8.68□□□□□ -1.02
COL4A1-205ENST00000615732 NQO2P16083 231 aa8.68□□□□□ -1.02
COL4A1-205ENST00000615732 ARHGDIBP52566 201 aa8.68□□□□□ -1.02
COL4A1-205ENST00000615732 DLX6P56179 175 aa8.68□□□□□ -1.02
COL4A1-205ENST00000615732 LINC00205P59089 165 aa8.68□□□□□ -1.02
COL4A1-205ENST00000615732 FAM74A1Q5RGS3 127 aa8.68□□□□□ -1.02
COL4A1-205ENST00000615732 UTF1Q5T230 341 aa8.68□□□□□ -1.02
COL4A1-205ENST00000615732 WDR25Q64LD2 544 aaPredicted RBP8.68□□□□□ -1.02
COL4A1-205ENST00000615732 FAM71F2Q6NXP2 309 aa8.68□□□□□ -1.02
COL4A1-205ENST00000615732 SSX9Q7RTT3 188 aa8.68□□□□□ -1.02
COL4A1-205ENST00000615732 LINC00311Q8N616 119 aa8.68□□□□□ -1.02
COL4A1-205ENST00000615732 TMEM252Q8N6L7 170 aa8.68□□□□□ -1.02
COL4A1-205ENST00000615732 C8orf31Q8N9H6 132 aa8.68□□□□□ -1.02
COL4A1-205ENST00000615732 OR4A16Q8NH70 328 aa8.68□□□□□ -1.02
COL4A1-205ENST00000615732 OR9G1Q8NH87 305 aa8.68□□□□□ -1.02
COL4A1-205ENST00000615732 LRRC20Q8TCA0 184 aa8.68□□□□□ -1.02
COL4A1-205ENST00000615732 WFDC12Q8WWY7 111 aa8.68□□□□□ -1.02
COL4A1-205ENST00000615732 CITED4Q96RK1 184 aa8.68□□□□□ -1.02
COL4A1-205ENST00000615732 PCGF1Q9BSM1 259 aa8.68□□□□□ -1.02
COL4A1-205ENST00000615732 SLC35D1Q9NTN3 355 aa8.68□□□□□ -1.02
COL4A1-205ENST00000615732 PSENENQ9NZ42 101 aa8.68□□□□□ -1.02
COL4A1-205ENST00000615732 WSB1Q9Y6I7 421 aa8.68□□□□□ -1.02
COL4A1-205ENST00000615732 FAM90A9PA6NNJ1 464 aa8.67□□□□□ -1.02
COL4A1-205ENST00000615732 CEBPZOSA8MTT3 80 aa8.67□□□□□ -1.02
COL4A1-205ENST00000615732 HRASP01112 189 aa8.67□□□□□ -1.02
COL4A1-205ENST00000615732 NMBP08949 121 aa8.67□□□□□ -1.02
COL4A1-205ENST00000615732 P0C879 139 aa8.67□□□□□ -1.02
COL4A1-205ENST00000615732 IGHV1-8P0DP01 117 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms