RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 ZNF355PQ9NSJ1 428 aa12.98□□□□□ -0.33
CBWD3-211ENST00000615061 E7EUB6 86 aa12.97□□□□□ -0.33
CBWD3-211ENST00000615061 ACTL6BO94805 426 aa12.97□□□□□ -0.33
CBWD3-211ENST00000615061 HRASP01112 189 aa12.97□□□□□ -0.33
CBWD3-211ENST00000615061 IGHV3-11P01762 117 aa12.97□□□□□ -0.33
CBWD3-211ENST00000615061 RPA2P15927 270 aa12.97□□□□□ -0.33
CBWD3-211ENST00000615061 TPPP2P59282 170 aa12.97□□□□□ -0.33
CBWD3-211ENST00000615061 OR4A47Q6IF82 309 aa12.97□□□□□ -0.33
CBWD3-211ENST00000615061 MMD2Q8IY49 270 aa12.97□□□□□ -0.33
CBWD3-211ENST00000615061 CMTM1Q8IZ96 169 aa12.97□□□□□ -0.33
CBWD3-211ENST00000615061 POC5Q8NA72 575 aa12.97□□□□□ -0.33
CBWD3-211ENST00000615061 TMEM167AQ8TBQ9 72 aa12.97□□□□□ -0.33
CBWD3-211ENST00000615061 BORCS5Q969J3 196 aa12.97□□□□□ -0.33
CBWD3-211ENST00000615061 RSRP1Q9BUV0 290 aa12.97□□□□□ -0.33
CBWD3-211ENST00000615061 TRAV3A0A0B4J244 114 aa12.97□□□□□ -0.33
CBWD3-211ENST00000615061 HPRT1P00492 218 aa12.97□□□□□ -0.33
CBWD3-211ENST00000615061 CD74P04233 296 aa12.97□□□□□ -0.33
CBWD3-211ENST00000615061 IFNA6P05013 189 aa12.97□□□□□ -0.33
CBWD3-211ENST00000615061 LHFPL1Q86WI0 220 aa12.97□□□□□ -0.33
CBWD3-211ENST00000615061 TMEM229BQ8NBD8 167 aa12.97□□□□□ -0.33
CBWD3-211ENST00000615061 VSTM2AQ8TAG5 236 aa12.97□□□□□ -0.33
CBWD3-211ENST00000615061 A0A1B0GW64 132 aa12.96□□□□□ -0.34
CBWD3-211ENST00000615061 WIPF1O43516 503 aa12.96□□□□□ -0.34
CBWD3-211ENST00000615061 TRGV3P03979 118 aa12.96□□□□□ -0.34
CBWD3-211ENST00000615061 PI3P19957 117 aa12.96□□□□□ -0.34
CBWD3-211ENST00000615061 F2RP25116 425 aa12.96□□□□□ -0.34
CBWD3-211ENST00000615061 TAS2R19P59542 299 aa12.96□□□□□ -0.34
CBWD3-211ENST00000615061 MRPS10P82664 201 aaKnown RBP12.96□□□□□ -0.34
CBWD3-211ENST00000615061 ZNF585BQ52M93 769 aa12.96□□□□□ -0.34
CBWD3-211ENST00000615061 STEAP1BQ6NZ63 245 aa12.96□□□□□ -0.34
CBWD3-211ENST00000615061 DGCR14Q96DF8 476 aaKnown RBP12.96□□□□□ -0.34
CBWD3-211ENST00000615061 SOSTQ9BQB4 213 aa12.96□□□□□ -0.34
CBWD3-211ENST00000615061 FABP12A6NFH5 140 aa12.95□□□□□ -0.34
CBWD3-211ENST00000615061 HMX3A6NHT5 357 aa12.95□□□□□ -0.34
CBWD3-211ENST00000615061 CTDSPLO15194 276 aa12.95□□□□□ -0.34
CBWD3-211ENST00000615061 CREBL2O60519 120 aaPredicted RBP12.95□□□□□ -0.34
CBWD3-211ENST00000615061 RBMXL2O75526 392 aaKnown RBP12.95□□□□□ -0.34
CBWD3-211ENST00000615061 RAB3DO95716 219 aa12.95□□□□□ -0.34
CBWD3-211ENST00000615061 IL6RP08887 468 aaPredicted RBP12.95□□□□□ -0.34
CBWD3-211ENST00000615061 NQO2P16083 231 aa12.95□□□□□ -0.34
CBWD3-211ENST00000615061 TBPP20226 339 aa12.95□□□□□ -0.34
CBWD3-211ENST00000615061 CD40LGP29965 261 aa12.95□□□□□ -0.34
CBWD3-211ENST00000615061 UCP3P55916 312 aa12.95□□□□□ -0.34
CBWD3-211ENST00000615061 TAS2R31P59538 309 aa12.95□□□□□ -0.34
CBWD3-211ENST00000615061 FHL3Q13643 280 aa12.95□□□□□ -0.34
CBWD3-211ENST00000615061 KPRPQ5T749 579 aaPredicted RBP12.95□□□□□ -0.34
CBWD3-211ENST00000615061 TBC1D26Q86UD7 250 aa12.95□□□□□ -0.34
CBWD3-211ENST00000615061 ARRDC1Q8N5I2 433 aa12.95□□□□□ -0.34
CBWD3-211ENST00000615061 CD300LFQ8TDQ1 290 aa12.95□□□□□ -0.34
CBWD3-211ENST00000615061 RCC1LQ96I51 464 aaKnown RBP12.95□□□□□ -0.34
CBWD3-211ENST00000615061 PLEKHA2Q9HB19 425 aa12.95□□□□□ -0.34
CBWD3-211ENST00000615061 HRASLSQ9HDD0 168 aa12.95□□□□□ -0.34
CBWD3-211ENST00000615061 BET1LQ9NYM9 111 aa12.95□□□□□ -0.34
CBWD3-211ENST00000615061 MPPED1O15442 326 aa12.94□□□□□ -0.34
CBWD3-211ENST00000615061 PRH1P02810 166 aa12.94□□□□□ -0.34
CBWD3-211ENST00000615061 LPAR6P43657 344 aa12.94□□□□□ -0.34
CBWD3-211ENST00000615061 PPP5CP53041 499 aa12.94□□□□□ -0.34
CBWD3-211ENST00000615061 RUNX1Q01196 453 aa12.94□□□□□ -0.34
CBWD3-211ENST00000615061 LPCAT3Q6P1A2 487 aa12.94□□□□□ -0.34
CBWD3-211ENST00000615061 C19orf35Q6ZS72 473 aa12.94□□□□□ -0.34
CBWD3-211ENST00000615061 SLC38A6Q8IZM9 456 aa12.94□□□□□ -0.34
CBWD3-211ENST00000615061 ADAD2Q8NCV1 583 aaKnown RBP12.94□□□□□ -0.34
CBWD3-211ENST00000615061 OR1N2Q8NGR9 330 aa12.94□□□□□ -0.34
CBWD3-211ENST00000615061 MRGPRFQ96AM1 343 aa12.94□□□□□ -0.34
CBWD3-211ENST00000615061 SLA2Q9H6Q3 261 aa12.94□□□□□ -0.34
CBWD3-211ENST00000615061 SLC2A9Q9NRM0 540 aa12.94□□□□□ -0.34
CBWD3-211ENST00000615061 TMEM140Q9NV12 185 aa12.94□□□□□ -0.34
CBWD3-211ENST00000615061 COA4Q9NYJ1 87 aa12.94□□□□□ -0.34
CBWD3-211ENST00000615061 TEX22C9J3V5 150 aa12.94□□□□□ -0.34
CBWD3-211ENST00000615061 ZNF701M0R085 212 aaPredicted RBP12.94□□□□□ -0.34
CBWD3-211ENST00000615061 ZNF735P0CB33 412 aa12.94□□□□□ -0.34
CBWD3-211ENST00000615061 RPL8P62917 257 aaKnown RBP12.94□□□□□ -0.34
CBWD3-211ENST00000615061 SSBP1Q04837 148 aaKnown RBP12.94□□□□□ -0.34
CBWD3-211ENST00000615061 POU2AF1Q16633 256 aa12.94□□□□□ -0.34
CBWD3-211ENST00000615061 SCGB2B2Q4G0G5 96 aa12.94□□□□□ -0.34
CBWD3-211ENST00000615061 FOXB2Q5VYV0 432 aa12.94□□□□□ -0.34
CBWD3-211ENST00000615061 DMBX1Q8NFW5 382 aa12.94□□□□□ -0.34
CBWD3-211ENST00000615061 TMEM68Q96MH6 324 aa12.94□□□□□ -0.34
CBWD3-211ENST00000615061 FYTTD1Q96QD9 318 aaKnown RBP12.94□□□□□ -0.34
CBWD3-211ENST00000615061 SPIN2AQ99865 258 aa12.94□□□□□ -0.34
CBWD3-211ENST00000615061 SPIN2BQ9BPZ2 258 aa12.94□□□□□ -0.34
CBWD3-211ENST00000615061 IGHV4OR15-8A0A075B7B6 117 aa12.93□□□□□ -0.34
CBWD3-211ENST00000615061 A0A087WW49 117 aa12.93□□□□□ -0.34
CBWD3-211ENST00000615061 CGB1A6NKQ9 187 aa12.93□□□□□ -0.34
CBWD3-211ENST00000615061 MARCH11A6NNE9 402 aa12.93□□□□□ -0.34
CBWD3-211ENST00000615061 KRASP01116 189 aa12.93□□□□□ -0.34
CBWD3-211ENST00000615061 LGALS1P09382 135 aaKnown RBP12.93□□□□□ -0.34
CBWD3-211ENST00000615061 PGAM2P15259 253 aa12.93□□□□□ -0.34
CBWD3-211ENST00000615061 HOXD3P31249 432 aaPredicted RBP12.93□□□□□ -0.34
CBWD3-211ENST00000615061 RPL27AP46776 148 aaKnown RBP12.93□□□□□ -0.34
CBWD3-211ENST00000615061 ZNF616Q08AN1 781 aa12.93□□□□□ -0.34
CBWD3-211ENST00000615061 OR4C16Q8NGL9 310 aa12.93□□□□□ -0.34
CBWD3-211ENST00000615061 COMMD9Q9P000 198 aa12.93□□□□□ -0.34
CBWD3-211ENST00000615061 SORL1Q92673 2214 aa12.93□□□□□ -0.34
CBWD3-211ENST00000615061 H3BUA1 57 aa12.92□□□□□ -0.34
CBWD3-211ENST00000615061 UPK2O00526 184 aa12.92□□□□□ -0.34
CBWD3-211ENST00000615061 OR9G9P0C7N8 305 aa12.92□□□□□ -0.34
CBWD3-211ENST00000615061 HLA-GP17693 338 aa12.92□□□□□ -0.34
CBWD3-211ENST00000615061 G6PCP35575 357 aa12.92□□□□□ -0.34
CBWD3-211ENST00000615061 TERB2Q8NHR7 220 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms