RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 TP53RKQ96S44 253 aa4.38□□□□□ -1.71
CPNE3-208ENST00000614678 MGAT4AQ9UM21 535 aa4.38□□□□□ -1.71
CPNE3-208ENST00000614678 TRGV3P03979 118 aa4.38□□□□□ -1.71
CPNE3-208ENST00000614678 FOXE3Q13461 319 aa4.38□□□□□ -1.71
CPNE3-208ENST00000614678 IL18Q14116 193 aa4.38□□□□□ -1.71
CPNE3-208ENST00000614678 CXorf66Q5JRM2 361 aaPredicted RBP4.38□□□□□ -1.71
CPNE3-208ENST00000614678 RNF152Q8N8N0 203 aa4.38□□□□□ -1.71
CPNE3-208ENST00000614678 MOB3AQ96BX8 217 aa4.38□□□□□ -1.71
CPNE3-208ENST00000614678 COA4Q9NYJ1 87 aa4.38□□□□□ -1.71
CPNE3-208ENST00000614678 OR2J3O76001 311 aa4.38□□□□□ -1.71
CPNE3-208ENST00000614678 CDX1P47902 265 aaPredicted RBP4.38□□□□□ -1.71
CPNE3-208ENST00000614678 SCAND1P57086 179 aa4.38□□□□□ -1.71
CPNE3-208ENST00000614678 TSPAN5P62079 268 aa4.38□□□□□ -1.71
CPNE3-208ENST00000614678 SLC35B1P78383 322 aa4.38□□□□□ -1.71
CPNE3-208ENST00000614678 TBC1D26Q86UD7 250 aa4.38□□□□□ -1.71
CPNE3-208ENST00000614678 ADAD2Q8NCV1 583 aaKnown RBP4.38□□□□□ -1.71
CPNE3-208ENST00000614678 OR8H1Q8NGG4 311 aa4.38□□□□□ -1.71
CPNE3-208ENST00000614678 LHFPL5Q8TAF8 219 aa4.38□□□□□ -1.71
CPNE3-208ENST00000614678 MARCH1Q8TCQ1 289 aa4.38□□□□□ -1.71
CPNE3-208ENST00000614678 TENM2Q9NT68 2774 aa4.38□□□□□ -1.71
CPNE3-208ENST00000614678 LINC00854A0A1B0GVQ3 168 aa4.38□□□□□ -1.71
CPNE3-208ENST00000614678 IZUMO1RA6ND01 250 aa4.38□□□□□ -1.71
CPNE3-208ENST00000614678 MFSD2BA6NFX1 497 aa4.38□□□□□ -1.71
CPNE3-208ENST00000614678 KBTBD11O94819 623 aa4.38□□□□□ -1.71
CPNE3-208ENST00000614678 RTL8BQ17RB0 113 aa4.38□□□□□ -1.71
CPNE3-208ENST00000614678 TMEM65Q6PI78 240 aa4.38□□□□□ -1.71
CPNE3-208ENST00000614678 PUSL1Q8N0Z8 303 aaKnown RBP4.38□□□□□ -1.71
CPNE3-208ENST00000614678 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.38□□□□□ -1.71
CPNE3-208ENST00000614678 OR1N2Q8NGR9 330 aa4.38□□□□□ -1.71
CPNE3-208ENST00000614678 RAB2BQ8WUD1 216 aa4.38□□□□□ -1.71
CPNE3-208ENST00000614678 KCTD12Q96CX2 325 aaKnown RBP4.38□□□□□ -1.71
CPNE3-208ENST00000614678 PHB2Q99623 299 aa4.38□□□□□ -1.71
CPNE3-208ENST00000614678 AKIP1Q9NQ31 210 aa4.38□□□□□ -1.71
CPNE3-208ENST00000614678 FOXA2Q9Y261 457 aaPredicted RBP4.38□□□□□ -1.71
CPNE3-208ENST00000614678 V9GYH0 126 aa4.38□□□□□ -1.71
CPNE3-208ENST00000614678 RYR3Q15413 4870 aa4.38□□□□□ -1.71
CPNE3-208ENST00000614678 SMIM31A0A1B0GVY4 71 aa4.37□□□□□ -1.71
CPNE3-208ENST00000614678 NDUFB8O95169 186 aa4.37□□□□□ -1.71
CPNE3-208ENST00000614678 LPAR6P43657 344 aa4.37□□□□□ -1.71
CPNE3-208ENST00000614678 TMBIM6P55061 237 aa4.37□□□□□ -1.71
CPNE3-208ENST00000614678 UBE2KP61086 200 aa4.37□□□□□ -1.71
CPNE3-208ENST00000614678 WT1-ASQ06250 92 aa4.37□□□□□ -1.71
CPNE3-208ENST00000614678 FHL3Q13643 280 aa4.37□□□□□ -1.71
CPNE3-208ENST00000614678 Q6ZRM9 215 aa4.37□□□□□ -1.71
CPNE3-208ENST00000614678 OR4C16Q8NGL9 310 aa4.37□□□□□ -1.71
CPNE3-208ENST00000614678 OR6F1Q8NGZ6 308 aa4.37□□□□□ -1.71
CPNE3-208ENST00000614678 C4orf3Q8WVX3 66 aa4.37□□□□□ -1.71
CPNE3-208ENST00000614678 CACNG8Q8WXS5 425 aa4.37□□□□□ -1.71
CPNE3-208ENST00000614678 FANCD2OSQ96PS1 177 aa4.37□□□□□ -1.71
CPNE3-208ENST00000614678 HRASLSQ9HDD0 168 aa4.37□□□□□ -1.71
CPNE3-208ENST00000614678 TMEM140Q9NV12 185 aa4.37□□□□□ -1.71
CPNE3-208ENST00000614678 MTFP1Q9UDX5 166 aa4.37□□□□□ -1.71
CPNE3-208ENST00000614678 A0A0A6YYH2 397 aa4.37□□□□□ -1.71
CPNE3-208ENST00000614678 A6NJ64 397 aa4.37□□□□□ -1.71
CPNE3-208ENST00000614678 AKIRIN2Q53H80 203 aa4.37□□□□□ -1.71
CPNE3-208ENST00000614678 ADAMTSL5Q6ZMM2 481 aa4.37□□□□□ -1.71
CPNE3-208ENST00000614678 OR13C8Q8NGS7 320 aa4.37□□□□□ -1.71
CPNE3-208ENST00000614678 MCFD2Q8NI22 146 aa4.37□□□□□ -1.71
CPNE3-208ENST00000614678 TSNAXQ99598 290 aaKnown RBP4.37□□□□□ -1.71
CPNE3-208ENST00000614678 HINT2Q9BX68 163 aa4.37□□□□□ -1.71
CPNE3-208ENST00000614678 OR2A4O95047 310 aa4.37□□□□□ -1.71
CPNE3-208ENST00000614678 ELANEP08246 267 aa4.37□□□□□ -1.71
CPNE3-208ENST00000614678 PGAM2P15259 253 aa4.37□□□□□ -1.71
CPNE3-208ENST00000614678 SYNJ2BPP57105 145 aa4.37□□□□□ -1.71
CPNE3-208ENST00000614678 MLANAQ16655 118 aa4.37□□□□□ -1.71
CPNE3-208ENST00000614678 SMUG1Q53HV7 270 aa4.37□□□□□ -1.71
CPNE3-208ENST00000614678 LHFPL1Q86WI0 220 aa4.37□□□□□ -1.71
CPNE3-208ENST00000614678 OR51S1Q8NGJ8 323 aa4.37□□□□□ -1.71
CPNE3-208ENST00000614678 UBE2E2Q96LR5 201 aa4.37□□□□□ -1.71
CPNE3-208ENST00000614678 OR2A7Q96R45 310 aa4.37□□□□□ -1.71
CPNE3-208ENST00000614678 SDHCQ99643 169 aaPredicted RBP4.37□□□□□ -1.71
CPNE3-208ENST00000614678 SOSTQ9BQB4 213 aa4.37□□□□□ -1.71
CPNE3-208ENST00000614678 SLC2A9Q9NRM0 540 aa4.37□□□□□ -1.71
CPNE3-208ENST00000614678 STARD9Q9P2P6 4700 aa4.37□□□□□ -1.71
CPNE3-208ENST00000614678 MARCH11A6NNE9 402 aa4.36□□□□□ -1.71
CPNE3-208ENST00000614678 DIRAS3O95661 229 aa4.36□□□□□ -1.71
CPNE3-208ENST00000614678 IGKV1-5P01602 117 aa4.36□□□□□ -1.71
CPNE3-208ENST00000614678 CTXN2P0C2S0 81 aa4.36□□□□□ -1.71
CPNE3-208ENST00000614678 LGALS7P47929 136 aa4.36□□□□□ -1.71
CPNE3-208ENST00000614678 HERV-K104P61576 105 aa4.36□□□□□ -1.71
CPNE3-208ENST00000614678 RHOGP84095 191 aa4.36□□□□□ -1.71
CPNE3-208ENST00000614678 BAK1Q16611 211 aa4.36□□□□□ -1.71
CPNE3-208ENST00000614678 DEFB121Q5J5C9 76 aa4.36□□□□□ -1.71
CPNE3-208ENST00000614678 KPRPQ5T749 579 aaPredicted RBP4.36□□□□□ -1.71
CPNE3-208ENST00000614678 CROCCP3Q8IVE0 287 aa4.36□□□□□ -1.71
CPNE3-208ENST00000614678 POC5Q8NA72 575 aa4.36□□□□□ -1.71
CPNE3-208ENST00000614678 DGCR14Q96DF8 476 aaKnown RBP4.36□□□□□ -1.71
CPNE3-208ENST00000614678 ZNF414Q96IQ9 312 aa4.36□□□□□ -1.71
CPNE3-208ENST00000614678 HSD17B10Q99714 261 aaKnown RBP4.36□□□□□ -1.71
CPNE3-208ENST00000614678 RTBDNQ9BSG5 229 aaPredicted RBP4.36□□□□□ -1.71
CPNE3-208ENST00000614678 BOLA1Q9Y3E2 137 aa4.36□□□□□ -1.71
CPNE3-208ENST00000614678 IGLC7A0M8Q6 106 aa4.36□□□□□ -1.71
CPNE3-208ENST00000614678 SEC14L6B5MCN3 397 aa4.36□□□□□ -1.71
CPNE3-208ENST00000614678 SCGNO76038 276 aa4.36□□□□□ -1.71
CPNE3-208ENST00000614678 PIGPP57054 158 aa4.36□□□□□ -1.71
CPNE3-208ENST00000614678 IL34Q6ZMJ4 242 aa4.36□□□□□ -1.71
CPNE3-208ENST00000614678 DMBX1Q8NFW5 382 aa4.36□□□□□ -1.71
CPNE3-208ENST00000614678 OSR1Q8TAX0 266 aaPredicted RBP4.36□□□□□ -1.71
CPNE3-208ENST00000614678 CCDC140Q96MF4 163 aa4.36□□□□□ -1.71
CPNE3-208ENST00000614678 ASCL2Q99929 193 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms