RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 ATP5G3P48201 142 aa7.27□□□□□ -1.25
LIG4-204ENST00000611712 GAMTQ14353 236 aa7.27□□□□□ -1.25
LIG4-204ENST00000611712 MOB3BQ86TA1 216 aa7.27□□□□□ -1.25
LIG4-204ENST00000611712 OR5B3Q8NH48 314 aa7.27□□□□□ -1.25
LIG4-204ENST00000611712 LYPD6BQ8NI32 183 aa7.27□□□□□ -1.25
LIG4-204ENST00000611712 FLYWCH2Q96CP2 140 aaKnown RBP7.27□□□□□ -1.25
LIG4-204ENST00000611712 ZMAT5Q9UDW3 170 aaKnown RBP7.27□□□□□ -1.25
LIG4-204ENST00000611712 METRNQ9UJH8 293 aa7.27□□□□□ -1.25
LIG4-204ENST00000611712 LRP4O75096 1905 aa7.26□□□□□ -1.25
LIG4-204ENST00000611712 SNRPCP09234 159 aaKnown RBP7.26□□□□□ -1.25
LIG4-204ENST00000611712 PMCHP20382 165 aa7.26□□□□□ -1.25
LIG4-204ENST00000611712 CD81P60033 236 aa7.26□□□□□ -1.25
LIG4-204ENST00000611712 HES1Q14469 280 aa7.26□□□□□ -1.25
LIG4-204ENST00000611712 ACSF3Q4G176 576 aaPredicted RBP7.26□□□□□ -1.25
LIG4-204ENST00000611712 C1orf185Q5T7R7 199 aa7.26□□□□□ -1.25
LIG4-204ENST00000611712 GFI1BQ5VTD9 330 aa7.26□□□□□ -1.25
LIG4-204ENST00000611712 TMEM14EPQ6UXP3 125 aa7.26□□□□□ -1.25
LIG4-204ENST00000611712 Q8NFD4 153 aa7.26□□□□□ -1.25
LIG4-204ENST00000611712 CA5BP1Q8WTZ4 195 aa7.26□□□□□ -1.25
LIG4-204ENST00000611712 WFIKKN1Q96NZ8 548 aa7.26□□□□□ -1.25
LIG4-204ENST00000611712 TXNDC17Q9BRA2 123 aa7.26□□□□□ -1.25
LIG4-204ENST00000611712 SLC25A10Q9UBX3 287 aaPredicted RBP7.26□□□□□ -1.25
LIG4-204ENST00000611712 ZNF835Q9Y2P0 537 aa7.26□□□□□ -1.25
LIG4-204ENST00000611712 MED13Q9UHV7 2174 aa7.26□□□□□ -1.25
LIG4-204ENST00000611712 TRGV8A0A0C4DH27 118 aa7.26□□□□□ -1.25
LIG4-204ENST00000611712 C1QTNF9BB2RNN3 333 aa7.26□□□□□ -1.25
LIG4-204ENST00000611712 IGKV1-39P01597 117 aa7.26□□□□□ -1.25
LIG4-204ENST00000611712 IGKV1D-39P04432 117 aa7.26□□□□□ -1.25
LIG4-204ENST00000611712 ORM2P19652 201 aa7.26□□□□□ -1.25
LIG4-204ENST00000611712 GLRXP35754 106 aa7.26□□□□□ -1.25
LIG4-204ENST00000611712 GCSAMLQ5JQS6 135 aa7.26□□□□□ -1.25
LIG4-204ENST00000611712 C1QL4Q86Z23 238 aa7.26□□□□□ -1.25
LIG4-204ENST00000611712 ZNF439Q8NDP4 499 aa7.26□□□□□ -1.25
LIG4-204ENST00000611712 VSTM2AQ8TAG5 236 aa7.26□□□□□ -1.25
LIG4-204ENST00000611712 TXN2Q99757 166 aa7.26□□□□□ -1.25
LIG4-204ENST00000611712 MS4A5Q9H3V2 200 aa7.26□□□□□ -1.25
LIG4-204ENST00000611712 EML6Q6ZMW3 1958 aa7.26□□□□□ -1.25
LIG4-204ENST00000611712 ZNF318Q5VUA4 2279 aa7.26□□□□□ -1.25
LIG4-204ENST00000611712 SNURFLB1AK76 121 aa7.26□□□□□ -1.25
LIG4-204ENST00000611712 NPIPB11E5RHQ5 1161 aa7.26□□□□□ -1.25
LIG4-204ENST00000611712 C16orf97H3BN30 126 aa7.26□□□□□ -1.25
LIG4-204ENST00000611712 KIR2DL2P43627 348 aaPredicted RBP7.26□□□□□ -1.25
LIG4-204ENST00000611712 OR1L6Q8NGR2 347 aa7.26□□□□□ -1.25
LIG4-204ENST00000611712 OR1L8Q8NGR8 309 aa7.26□□□□□ -1.25
LIG4-204ENST00000611712 OR4X1Q8NH49 305 aa7.26□□□□□ -1.25
LIG4-204ENST00000611712 BLNKQ8WV28 456 aa7.26□□□□□ -1.25
LIG4-204ENST00000611712 IL19Q9UHD0 177 aa7.26□□□□□ -1.25
LIG4-204ENST00000611712 USF3Q68DE3 2245 aa7.26□□□□□ -1.25
LIG4-204ENST00000611712 MLNRO43193 412 aa7.25□□□□□ -1.25
LIG4-204ENST00000611712 VENTXO95231 258 aa7.25□□□□□ -1.25
LIG4-204ENST00000611712 RPL29P47914 159 aaKnown RBP7.25□□□□□ -1.25
LIG4-204ENST00000611712 SLC35B1P78383 322 aa7.25□□□□□ -1.25
LIG4-204ENST00000611712 HOXA4Q00056 320 aaPredicted RBP7.25□□□□□ -1.25
LIG4-204ENST00000611712 MORN2Q502X0 79 aa7.25□□□□□ -1.25
LIG4-204ENST00000611712 FAM53AQ6NSI3 398 aaPredicted RBP7.25□□□□□ -1.25
LIG4-204ENST00000611712 STPG3Q8N7X2 389 aa7.25□□□□□ -1.25
LIG4-204ENST00000611712 COQ2Q96H96 371 aa7.25□□□□□ -1.25
LIG4-204ENST00000611712 PARD6AQ9NPB6 346 aa7.25□□□□□ -1.25
LIG4-204ENST00000611712 SPTBN1Q01082 2364 aaKnown RBP7.25□□□□□ -1.25
LIG4-204ENST00000611712 OR9G9P0C7N8 305 aa7.25□□□□□ -1.25
LIG4-204ENST00000611712 DUTP33316 252 aaKnown RBP7.25□□□□□ -1.25
LIG4-204ENST00000611712 SSTP61278 116 aa7.25□□□□□ -1.25
LIG4-204ENST00000611712 FAM90A2PQ658T7 463 aa7.25□□□□□ -1.25
LIG4-204ENST00000611712 MRPL54Q6P161 138 aaKnown RBP7.25□□□□□ -1.25
LIG4-204ENST00000611712 WDR86Q86TI4 376 aa7.25□□□□□ -1.25
LIG4-204ENST00000611712 TMEM183AQ8IXX5 376 aa7.25□□□□□ -1.25
LIG4-204ENST00000611712 TPPP3Q9BW30 176 aa7.25□□□□□ -1.25
LIG4-204ENST00000611712 MBNL3Q9NUK0 354 aaKnown RBP7.25□□□□□ -1.25
LIG4-204ENST00000611712 IDI2-AS1Q9NZ38 188 aa7.25□□□□□ -1.25
LIG4-204ENST00000611712 GATCO43716 136 aaKnown RBP7.25□□□□□ -1.25
LIG4-204ENST00000611712 CA2P00918 260 aa7.25□□□□□ -1.25
LIG4-204ENST00000611712 GCHFRP30047 84 aa7.25□□□□□ -1.25
LIG4-204ENST00000611712 KRTAP27-1Q3LI81 207 aa7.25□□□□□ -1.25
LIG4-204ENST00000611712 TIMM23BQ5SRD1 257 aa7.25□□□□□ -1.25
LIG4-204ENST00000611712 PEAR1Q5VY43 1037 aaPredicted RBP7.25□□□□□ -1.25
LIG4-204ENST00000611712 TGIF2LYQ8IUE0 185 aa7.25□□□□□ -1.25
LIG4-204ENST00000611712 TGIF2LXQ8IUE1 241 aa7.25□□□□□ -1.25
LIG4-204ENST00000611712 ELOVL1Q9BW60 279 aa7.25□□□□□ -1.25
LIG4-204ENST00000611712 CLCF1Q9UBD9 225 aa7.25□□□□□ -1.25
LIG4-204ENST00000611712 ABCA1O95477 2261 aa7.24□□□□□ -1.25
LIG4-204ENST00000611712 IGHV1-18A0A0C4DH31 117 aa7.24□□□□□ -1.25
LIG4-204ENST00000611712 C19orf67A6NJJ6 358 aa7.24□□□□□ -1.25
LIG4-204ENST00000611712 CDX4O14627 284 aaPredicted RBP7.24□□□□□ -1.25
LIG4-204ENST00000611712 HSBP1O75506 76 aa7.24□□□□□ -1.25
LIG4-204ENST00000611712 SCGB2A1O75556 95 aa7.24□□□□□ -1.25
LIG4-204ENST00000611712 TOX4O94842 621 aa7.24□□□□□ -1.25
LIG4-204ENST00000611712 SLC25A5P05141 298 aaKnown RBP7.24□□□□□ -1.25
LIG4-204ENST00000611712 IL6RP08887 468 aaPredicted RBP7.24□□□□□ -1.25
LIG4-204ENST00000611712 APELAP0DMC3 54 aa7.24□□□□□ -1.25
LIG4-204ENST00000611712 AMTP48728 403 aa7.24□□□□□ -1.25
LIG4-204ENST00000611712 FAM27E3Q08E93 113 aa7.24□□□□□ -1.25
LIG4-204ENST00000611712 LRP11Q86VZ4 500 aa7.24□□□□□ -1.25
LIG4-204ENST00000611712 WDR31Q8NA23 367 aa7.24□□□□□ -1.25
LIG4-204ENST00000611712 A0A0C4DFX4 3053 aa7.24□□□□□ -1.25
LIG4-204ENST00000611712 PRR14LQ5THK1 2151 aa7.24□□□□□ -1.25
LIG4-204ENST00000611712 A0A1W2PN81 502 aa7.24□□□□□ -1.25
LIG4-204ENST00000611712 LINC00473A8K010 186 aa7.24□□□□□ -1.25
LIG4-204ENST00000611712 ZNF253O75346 499 aa7.24□□□□□ -1.25
LIG4-204ENST00000611712 DDTP30046 118 aa7.24□□□□□ -1.25
LIG4-204ENST00000611712 RANP62826 216 aaKnown RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms