RNA–Protein interactions for RNA: ENST00000606676.1

SHROOM1-207, Transcript of shroom family member 1, humanhuman

Gene SHROOM1, Length 351 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-207ENST00000606676 SSX9Q7RTT3 188 aa9.9□□□□□ -0.82
SHROOM1-207ENST00000606676 VSTM2AQ8TAG5 236 aa9.9□□□□□ -0.82
SHROOM1-207ENST00000606676 FCAMRQ8WWV6 532 aa9.9□□□□□ -0.82
SHROOM1-207ENST00000606676 TINAGL1Q9GZM7 467 aaPredicted RBP9.9□□□□□ -0.82
SHROOM1-207ENST00000606676 RBM38Q9H0Z9 239 aaKnown RBP9.9□□□□□ -0.82
SHROOM1-207ENST00000606676 A0A1B0GW64 132 aa9.89□□□□□ -0.83
SHROOM1-207ENST00000606676 TEX22C9J3V5 150 aa9.89□□□□□ -0.83
SHROOM1-207ENST00000606676 H3BUA1 57 aa9.89□□□□□ -0.83
SHROOM1-207ENST00000606676 GPR31O00270 319 aa9.89□□□□□ -0.83
SHROOM1-207ENST00000606676 CREBL2O60519 120 aaPredicted RBP9.89□□□□□ -0.83
SHROOM1-207ENST00000606676 RBMXL2O75526 392 aaKnown RBP9.89□□□□□ -0.83
SHROOM1-207ENST00000606676 S1PR2O95136 353 aa9.89□□□□□ -0.83
SHROOM1-207ENST00000606676 IGHV3-11P01762 117 aa9.89□□□□□ -0.83
SHROOM1-207ENST00000606676 TRGV3P03979 118 aa9.89□□□□□ -0.83
SHROOM1-207ENST00000606676 F2RP25116 425 aa9.89□□□□□ -0.83
SHROOM1-207ENST00000606676 CD40LGP29965 261 aa9.89□□□□□ -0.83
SHROOM1-207ENST00000606676 UCP3P55916 312 aa9.89□□□□□ -0.83
SHROOM1-207ENST00000606676 RAB25P57735 213 aa9.89□□□□□ -0.83
SHROOM1-207ENST00000606676 TPPP2P59282 170 aa9.89□□□□□ -0.83
SHROOM1-207ENST00000606676 TAS2R31P59538 309 aa9.89□□□□□ -0.83
SHROOM1-207ENST00000606676 KRTAP10-11P60412 298 aa9.89□□□□□ -0.83
SHROOM1-207ENST00000606676 ZNF616Q08AN1 781 aa9.89□□□□□ -0.83
SHROOM1-207ENST00000606676 OR4A47Q6IF82 309 aa9.89□□□□□ -0.83
SHROOM1-207ENST00000606676 LHFPL1Q86WI0 220 aa9.89□□□□□ -0.83
SHROOM1-207ENST00000606676 CMTM1Q8IZ96 169 aa9.89□□□□□ -0.83
SHROOM1-207ENST00000606676 ADAD2Q8NCV1 583 aaKnown RBP9.89□□□□□ -0.83
SHROOM1-207ENST00000606676 OR4D10Q8NGI6 311 aa9.89□□□□□ -0.83
SHROOM1-207ENST00000606676 CD300LFQ8TDQ1 290 aa9.89□□□□□ -0.83
SHROOM1-207ENST00000606676 DIRAS2Q96HU8 199 aa9.89□□□□□ -0.83
SHROOM1-207ENST00000606676 PHB2Q99623 299 aa9.89□□□□□ -0.83
SHROOM1-207ENST00000606676 SPIN2AQ99865 258 aa9.89□□□□□ -0.83
SHROOM1-207ENST00000606676 SPIN2BQ9BPZ2 258 aa9.89□□□□□ -0.83
SHROOM1-207ENST00000606676 SOSTQ9BQB4 213 aa9.89□□□□□ -0.83
SHROOM1-207ENST00000606676 RSRP1Q9BUV0 290 aa9.89□□□□□ -0.83
SHROOM1-207ENST00000606676 C6orf62Q9GZU0 229 aaPredicted RBP9.89□□□□□ -0.83
SHROOM1-207ENST00000606676 PLEKHA2Q9HB19 425 aa9.89□□□□□ -0.83
SHROOM1-207ENST00000606676 ZNF355PQ9NSJ1 428 aa9.89□□□□□ -0.83
SHROOM1-207ENST00000606676 BET1LQ9NYM9 111 aa9.89□□□□□ -0.83
SHROOM1-207ENST00000606676 IGHV4OR15-8A0A075B7B6 117 aa9.88□□□□□ -0.83
SHROOM1-207ENST00000606676 A0A087WW49 117 aa9.88□□□□□ -0.83
SHROOM1-207ENST00000606676 TRAV3A0A0B4J244 114 aa9.88□□□□□ -0.83
SHROOM1-207ENST00000606676 CTDSPLO15194 276 aa9.88□□□□□ -0.83
SHROOM1-207ENST00000606676 ACTL6BO94805 426 aa9.88□□□□□ -0.83
SHROOM1-207ENST00000606676 CD74P04233 296 aa9.88□□□□□ -0.83
SHROOM1-207ENST00000606676 OR8U8P0C7N1 319 aa9.88□□□□□ -0.83
SHROOM1-207ENST00000606676 MYOD1P15172 320 aa9.88□□□□□ -0.83
SHROOM1-207ENST00000606676 NQO2P16083 231 aa9.88□□□□□ -0.83
SHROOM1-207ENST00000606676 TBPP20226 339 aa9.88□□□□□ -0.83
SHROOM1-207ENST00000606676 HOXD3P31249 432 aaPredicted RBP9.88□□□□□ -0.83
SHROOM1-207ENST00000606676 TNFSF8P32971 234 aa9.88□□□□□ -0.83
SHROOM1-207ENST00000606676 MAS1LP35410 378 aa9.88□□□□□ -0.83
SHROOM1-207ENST00000606676 RPL8P62917 257 aaKnown RBP9.88□□□□□ -0.83
SHROOM1-207ENST00000606676 MRPS10P82664 201 aaKnown RBP9.88□□□□□ -0.83
SHROOM1-207ENST00000606676 EGFEM1PQ0D2K5 195 aa9.88□□□□□ -0.83
SHROOM1-207ENST00000606676 ZNF585BQ52M93 769 aa9.88□□□□□ -0.83
SHROOM1-207ENST00000606676 RNASE10Q5GAN6 216 aaKnown RBP9.88□□□□□ -0.83
SHROOM1-207ENST00000606676 TMEM229BQ8NBD8 167 aa9.88□□□□□ -0.83
SHROOM1-207ENST00000606676 SMIM4Q8WVI0 70 aa9.88□□□□□ -0.83
SHROOM1-207ENST00000606676 DGCR14Q96DF8 476 aaKnown RBP9.88□□□□□ -0.83
SHROOM1-207ENST00000606676 AIFM2Q9BRQ8 373 aa9.88□□□□□ -0.83
SHROOM1-207ENST00000606676 MCRIP2Q9BUT9 160 aaKnown RBP9.88□□□□□ -0.83
SHROOM1-207ENST00000606676 HMX3A6NHT5 357 aa9.87□□□□□ -0.83
SHROOM1-207ENST00000606676 CGB1A6NKQ9 187 aa9.87□□□□□ -0.83
SHROOM1-207ENST00000606676 UPK2O00526 184 aa9.87□□□□□ -0.83
SHROOM1-207ENST00000606676 OR9G9P0C7N8 305 aa9.87□□□□□ -0.83
SHROOM1-207ENST00000606676 ZNF735P0CB33 412 aa9.87□□□□□ -0.83
SHROOM1-207ENST00000606676 LPAR6P43657 344 aa9.87□□□□□ -0.83
SHROOM1-207ENST00000606676 RPL27AP46776 148 aaKnown RBP9.87□□□□□ -0.83
SHROOM1-207ENST00000606676 DEFA5Q01523 94 aa9.87□□□□□ -0.83
SHROOM1-207ENST00000606676 ZNF45Q02386 682 aa9.87□□□□□ -0.83
SHROOM1-207ENST00000606676 SSBP1Q04837 148 aaKnown RBP9.87□□□□□ -0.83
SHROOM1-207ENST00000606676 IL18Q14116 193 aa9.87□□□□□ -0.83
SHROOM1-207ENST00000606676 PHLDA2Q53GA4 152 aa9.87□□□□□ -0.83
SHROOM1-207ENST00000606676 LPCAT3Q6P1A2 487 aa9.87□□□□□ -0.83
SHROOM1-207ENST00000606676 REC114Q7Z4M0 266 aa9.87□□□□□ -0.83
SHROOM1-207ENST00000606676 SLC38A6Q8IZM9 456 aa9.87□□□□□ -0.83
SHROOM1-207ENST00000606676 ARRDC1Q8N5I2 433 aa9.87□□□□□ -0.83
SHROOM1-207ENST00000606676 TTC9CQ8N5M4 171 aa9.87□□□□□ -0.83
SHROOM1-207ENST00000606676 OR4A5Q8NH83 315 aa9.87□□□□□ -0.83
SHROOM1-207ENST00000606676 MCFD2Q8NI22 146 aa9.87□□□□□ -0.83
SHROOM1-207ENST00000606676 DPF1Q92782 380 aa9.87□□□□□ -0.83
SHROOM1-207ENST00000606676 AURKAIP1Q9NWT8 199 aaPredicted RBP9.87□□□□□ -0.83
SHROOM1-207ENST00000606676 COA4Q9NYJ1 87 aa9.87□□□□□ -0.83
SHROOM1-207ENST00000606676 COMMD9Q9P000 198 aa9.87□□□□□ -0.83
SHROOM1-207ENST00000606676 TRBV9A0A0B4J1U6 114 aa9.86□□□□□ -0.83
SHROOM1-207ENST00000606676 CCDC160A6NGH7 325 aa9.86□□□□□ -0.83
SHROOM1-207ENST00000606676 LINC01619G3V211 115 aa9.86□□□□□ -0.83
SHROOM1-207ENST00000606676 MPPED1O15442 326 aa9.86□□□□□ -0.83
SHROOM1-207ENST00000606676 RAB3DO95716 219 aa9.86□□□□□ -0.83
SHROOM1-207ENST00000606676 PRH1P02810 166 aa9.86□□□□□ -0.83
SHROOM1-207ENST00000606676 HSPB1P04792 205 aaKnown RBP9.86□□□□□ -0.83
SHROOM1-207ENST00000606676 IFNA6P05013 189 aa9.86□□□□□ -0.83
SHROOM1-207ENST00000606676 RPA2P15927 270 aa9.86□□□□□ -0.83
SHROOM1-207ENST00000606676 HLA-GP17693 338 aa9.86□□□□□ -0.83
SHROOM1-207ENST00000606676 SLURP1P55000 103 aa9.86□□□□□ -0.83
SHROOM1-207ENST00000606676 TAS2R19P59542 299 aa9.86□□□□□ -0.83
SHROOM1-207ENST00000606676 STEAP1BQ6NZ63 245 aa9.86□□□□□ -0.83
SHROOM1-207ENST00000606676 C19orf35Q6ZS72 473 aa9.86□□□□□ -0.83
SHROOM1-207ENST00000606676 TBC1D26Q86UD7 250 aa9.86□□□□□ -0.83
SHROOM1-207ENST00000606676 DCUN1D4Q92564 292 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms