RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 TMEM167AQ8TBQ9 72 aa11.22□□□□□ -0.61
CTSA-211ENST00000606066 MRGPRFQ96AM1 343 aa11.22□□□□□ -0.61
CTSA-211ENST00000606066 SDHCQ99643 169 aaPredicted RBP11.22□□□□□ -0.61
CTSA-211ENST00000606066 SLC25A21Q9BQT8 299 aaPredicted RBP11.22□□□□□ -0.61
CTSA-211ENST00000606066 CCDC32Q9BV29 185 aa11.22□□□□□ -0.61
CTSA-211ENST00000606066 BET1LQ9NYM9 111 aa11.22□□□□□ -0.61
CTSA-211ENST00000606066 GPR132Q9UNW8 380 aa11.22□□□□□ -0.61
CTSA-211ENST00000606066 C3orf85A0A1B0GTC6 90 aa11.21□□□□□ -0.61
CTSA-211ENST00000606066 TCRBV4S1A1TA0A5B7 111 aa11.21□□□□□ -0.61
CTSA-211ENST00000606066 H0Y980 276 aa11.21□□□□□ -0.61
CTSA-211ENST00000606066 M0QZ24 198 aa11.21□□□□□ -0.61
CTSA-211ENST00000606066 KBTBD11O94819 623 aa11.21□□□□□ -0.61
CTSA-211ENST00000606066 S1PR2O95136 353 aa11.21□□□□□ -0.61
CTSA-211ENST00000606066 RPA2P15927 270 aa11.21□□□□□ -0.61
CTSA-211ENST00000606066 CD40LGP29965 261 aa11.21□□□□□ -0.61
CTSA-211ENST00000606066 MAS1LP35410 378 aa11.21□□□□□ -0.61
CTSA-211ENST00000606066 CRIP2P52943 208 aaPredicted RBP11.21□□□□□ -0.61
CTSA-211ENST00000606066 NDPQ00604 133 aa11.21□□□□□ -0.61
CTSA-211ENST00000606066 PJVKQ0ZLH3 352 aa11.21□□□□□ -0.61
CTSA-211ENST00000606066 TNXAQ16473 311 aa11.21□□□□□ -0.61
CTSA-211ENST00000606066 ZNF585BQ52M93 769 aa11.21□□□□□ -0.61
CTSA-211ENST00000606066 AKIRIN2Q53H80 203 aa11.21□□□□□ -0.61
CTSA-211ENST00000606066 OR4A47Q6IF82 309 aa11.21□□□□□ -0.61
CTSA-211ENST00000606066 SSX9Q7RTT3 188 aa11.21□□□□□ -0.61
CTSA-211ENST00000606066 GRPEL2Q8TAA5 225 aa11.21□□□□□ -0.61
CTSA-211ENST00000606066 R3HDM4Q96D70 268 aa11.21□□□□□ -0.61
CTSA-211ENST00000606066 TMEM68Q96MH6 324 aa11.21□□□□□ -0.61
CTSA-211ENST00000606066 C7orf50Q9BRJ6 194 aaKnown RBP11.21□□□□□ -0.61
CTSA-211ENST00000606066 RTBDNQ9BSG5 229 aaPredicted RBP11.21□□□□□ -0.61
CTSA-211ENST00000606066 WDR12Q9GZL7 423 aaKnown RBP11.21□□□□□ -0.61
CTSA-211ENST00000606066 C5orf66Q9H5L9 145 aa11.21□□□□□ -0.61
CTSA-211ENST00000606066 ZNF430Q9H8G1 570 aaPredicted RBP11.21□□□□□ -0.61
CTSA-211ENST00000606066 WSB1Q9Y6I7 421 aa11.21□□□□□ -0.61
CTSA-211ENST00000606066 TEX13DA0A0J9YY54 714 aaPredicted RBP11.2□□□□□ -0.62
CTSA-211ENST00000606066 MARCH11A6NNE9 402 aa11.2□□□□□ -0.62
CTSA-211ENST00000606066 G3V318 75 aa11.2□□□□□ -0.62
CTSA-211ENST00000606066 ARPC1BO15143 372 aaKnown RBP11.2□□□□□ -0.62
CTSA-211ENST00000606066 ATG12O94817 140 aa11.2□□□□□ -0.62
CTSA-211ENST00000606066 IGHG4P01861 327 aa11.2□□□□□ -0.62
CTSA-211ENST00000606066 ELANEP08246 267 aa11.2□□□□□ -0.62
CTSA-211ENST00000606066 CD83Q01151 205 aa11.2□□□□□ -0.62
CTSA-211ENST00000606066 CFHR3Q02985 330 aa11.2□□□□□ -0.62
CTSA-211ENST00000606066 FOXE3Q13461 319 aa11.2□□□□□ -0.62
CTSA-211ENST00000606066 ZNF846Q147U1 533 aa11.2□□□□□ -0.62
CTSA-211ENST00000606066 ECSCRQ19T08 205 aa11.2□□□□□ -0.62
CTSA-211ENST00000606066 C2orf68Q2NKX9 166 aa11.2□□□□□ -0.62
CTSA-211ENST00000606066 UNQ5815/PRO19632Q6UWF5 114 aa11.2□□□□□ -0.62
CTSA-211ENST00000606066 C10orf99Q6UWK7 81 aa11.2□□□□□ -0.62
CTSA-211ENST00000606066 NDUFA11Q86Y39 141 aa11.2□□□□□ -0.62
CTSA-211ENST00000606066 CADM3Q8N126 398 aa11.2□□□□□ -0.62
CTSA-211ENST00000606066 PHB2Q99623 299 aa11.2□□□□□ -0.62
CTSA-211ENST00000606066 CITED2Q99967 270 aaPredicted RBP11.2□□□□□ -0.62
CTSA-211ENST00000606066 ZFP57Q9NU63 452 aa11.2□□□□□ -0.62
CTSA-211ENST00000606066 TSSC4Q9Y5U2 329 aaPredicted RBP11.2□□□□□ -0.62
CTSA-211ENST00000606066 NUBP2Q9Y5Y2 271 aa11.2□□□□□ -0.62
CTSA-211ENST00000606066 KRASP01116 189 aa11.19□□□□□ -0.62
CTSA-211ENST00000606066 FGF2P09038 288 aa11.19□□□□□ -0.62
CTSA-211ENST00000606066 EGR2P11161 476 aaPredicted RBP11.19□□□□□ -0.62
CTSA-211ENST00000606066 PPIFP30405 207 aaKnown RBP11.19□□□□□ -0.62
CTSA-211ENST00000606066 RPL8P62917 257 aaKnown RBP11.19□□□□□ -0.62
CTSA-211ENST00000606066 MRGPRG-AS1Q2M3A8 158 aa11.19□□□□□ -0.62
CTSA-211ENST00000606066 CXorf66Q5JRM2 361 aaPredicted RBP11.19□□□□□ -0.62
CTSA-211ENST00000606066 TMEM65Q6PI78 240 aa11.19□□□□□ -0.62
CTSA-211ENST00000606066 SGPP2Q8IWX5 399 aa11.19□□□□□ -0.62
CTSA-211ENST00000606066 MINDY2Q8NBR6 621 aa11.19□□□□□ -0.62
CTSA-211ENST00000606066 LFNGQ8NES3 379 aa11.19□□□□□ -0.62
CTSA-211ENST00000606066 OR5M8Q8NGP6 311 aa11.19□□□□□ -0.62
CTSA-211ENST00000606066 SRSF12Q8WXF0 261 aaKnown RBP11.19□□□□□ -0.62
CTSA-211ENST00000606066 SPIN2AQ99865 258 aa11.19□□□□□ -0.62
CTSA-211ENST00000606066 SPIN2BQ9BPZ2 258 aa11.19□□□□□ -0.62
CTSA-211ENST00000606066 FAM103A1Q9BTL3 118 aaKnown RBP11.19□□□□□ -0.62
CTSA-211ENST00000606066 NAA60Q9H7X0 242 aa11.19□□□□□ -0.62
CTSA-211ENST00000606066 TMEM140Q9NV12 185 aa11.19□□□□□ -0.62
CTSA-211ENST00000606066 FOXA2Q9Y261 457 aaPredicted RBP11.19□□□□□ -0.62
CTSA-211ENST00000606066 KCNIP3Q9Y2W7 256 aa11.19□□□□□ -0.62
CTSA-211ENST00000606066 FBXO7Q9Y3I1 522 aa11.19□□□□□ -0.62
CTSA-211ENST00000606066 LINC00854A0A1B0GVQ3 168 aa11.18□□□□□ -0.62
CTSA-211ENST00000606066 A0A1W2PN81 502 aa11.18□□□□□ -0.62
CTSA-211ENST00000606066 MSGN1A6NI15 193 aa11.18□□□□□ -0.62
CTSA-211ENST00000606066 CRYM-AS1A6NIL9 109 aa11.18□□□□□ -0.62
CTSA-211ENST00000606066 UPK2O00526 184 aa11.18□□□□□ -0.62
CTSA-211ENST00000606066 SNAPC5O75971 98 aa11.18□□□□□ -0.62
CTSA-211ENST00000606066 HLA-GP17693 338 aa11.18□□□□□ -0.62
CTSA-211ENST00000606066 G6PCP35575 357 aa11.18□□□□□ -0.62
CTSA-211ENST00000606066 CHRNA7P36544 502 aa11.18□□□□□ -0.62
CTSA-211ENST00000606066 SSBP2P81877 361 aaPredicted RBP11.18□□□□□ -0.62
CTSA-211ENST00000606066 DHODHQ02127 395 aa11.18□□□□□ -0.62
CTSA-211ENST00000606066 RBMS2Q15434 407 aaKnown RBP11.18□□□□□ -0.62
CTSA-211ENST00000606066 TRIM16LQ309B1 348 aa11.18□□□□□ -0.62
CTSA-211ENST00000606066 TCTEX1D4Q5JR98 221 aa11.18□□□□□ -0.62
CTSA-211ENST00000606066 KHDC1LQ5JSQ8 128 aa11.18□□□□□ -0.62
CTSA-211ENST00000606066 TP53RKQ96S44 253 aa11.18□□□□□ -0.62
CTSA-211ENST00000606066 TSC22D3Q99576 134 aa11.18□□□□□ -0.62
CTSA-211ENST00000606066 VSIG4Q9Y279 399 aa11.18□□□□□ -0.62
CTSA-211ENST00000606066 IGLV1-40P01703 118 aa11.17□□□□□ -0.62
CTSA-211ENST00000606066 IL6RP08887 468 aaPredicted RBP11.17□□□□□ -0.62
CTSA-211ENST00000606066 ANXA3P12429 323 aa11.17□□□□□ -0.62
CTSA-211ENST00000606066 UCP1P25874 307 aa11.17□□□□□ -0.62
CTSA-211ENST00000606066 PSMB8P28062 276 aa11.17□□□□□ -0.62
CTSA-211ENST00000606066 RPL27AP46776 148 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms