RNA–Protein interactions for RNA: ENST00000602905.1

PPFIA3-213, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-213ENST00000602905 VKORC1L1Q8N0U8 176 aa12.57□□□□□ -0.4
PPFIA3-213ENST00000602905 LFNGQ8NES3 379 aa12.57□□□□□ -0.4
PPFIA3-213ENST00000602905 OR51S1Q8NGJ8 323 aa12.57□□□□□ -0.4
PPFIA3-213ENST00000602905 MARCH1Q8TCQ1 289 aa12.57□□□□□ -0.4
PPFIA3-213ENST00000602905 DEDD2Q8WXF8 326 aa12.57□□□□□ -0.4
PPFIA3-213ENST00000602905 TMEM68Q96MH6 324 aa12.57□□□□□ -0.4
PPFIA3-213ENST00000602905 FAM103A1Q9BTL3 118 aaKnown RBP12.57□□□□□ -0.4
PPFIA3-213ENST00000602905 SRRQ9GZT4 340 aa12.57□□□□□ -0.4
PPFIA3-213ENST00000602905 HRASLSQ9HDD0 168 aa12.57□□□□□ -0.4
PPFIA3-213ENST00000602905 FOXA2Q9Y261 457 aaPredicted RBP12.57□□□□□ -0.4
PPFIA3-213ENST00000602905 NUBP2Q9Y5Y2 271 aa12.57□□□□□ -0.4
PPFIA3-213ENST00000602905 NUDT19A8MXV4 375 aa12.56□□□□□ -0.4
PPFIA3-213ENST00000602905 MPPED1O15442 326 aa12.56□□□□□ -0.4
PPFIA3-213ENST00000602905 S1PR2O95136 353 aa12.56□□□□□ -0.4
PPFIA3-213ENST00000602905 CTSDP07339 412 aaPredicted RBP12.56□□□□□ -0.4
PPFIA3-213ENST00000602905 MAS1LP35410 378 aa12.56□□□□□ -0.4
PPFIA3-213ENST00000602905 CFHR3Q02985 330 aa12.56□□□□□ -0.4
PPFIA3-213ENST00000602905 CNPY1Q3B7I2 92 aa12.56□□□□□ -0.4
PPFIA3-213ENST00000602905 TCTEX1D4Q5JR98 221 aa12.56□□□□□ -0.4
PPFIA3-213ENST00000602905 PUSL1Q8N0Z8 303 aaKnown RBP12.56□□□□□ -0.4
PPFIA3-213ENST00000602905 OR5M8Q8NGP6 311 aa12.56□□□□□ -0.4
PPFIA3-213ENST00000602905 OR13C8Q8NGS7 320 aa12.56□□□□□ -0.4
PPFIA3-213ENST00000602905 TMEM167AQ8TBQ9 72 aa12.56□□□□□ -0.4
PPFIA3-213ENST00000602905 TRIM63Q969Q1 353 aa12.56□□□□□ -0.4
PPFIA3-213ENST00000602905 R3HDM4Q96D70 268 aa12.56□□□□□ -0.4
PPFIA3-213ENST00000602905 ZNF430Q9H8G1 570 aaPredicted RBP12.56□□□□□ -0.4
PPFIA3-213ENST00000602905 SLC2A8Q9NY64 477 aa12.56□□□□□ -0.4
PPFIA3-213ENST00000602905 BET1LQ9NYM9 111 aa12.56□□□□□ -0.4
PPFIA3-213ENST00000602905 FBXO7Q9Y3I1 522 aa12.56□□□□□ -0.4
PPFIA3-213ENST00000602905 ARPC1BO15143 372 aaKnown RBP12.55□□□□□ -0.4
PPFIA3-213ENST00000602905 SERPINE2P07093 398 aa12.55□□□□□ -0.4
PPFIA3-213ENST00000602905 PI3P19957 117 aa12.55□□□□□ -0.4
PPFIA3-213ENST00000602905 PPIFP30405 207 aaKnown RBP12.55□□□□□ -0.4
PPFIA3-213ENST00000602905 SLC6A1P30531 599 aa12.55□□□□□ -0.4
PPFIA3-213ENST00000602905 RPL23AP62750 156 aaKnown RBP12.55□□□□□ -0.4
PPFIA3-213ENST00000602905 KLF9Q13886 244 aaPredicted RBP12.55□□□□□ -0.4
PPFIA3-213ENST00000602905 POU2AF1Q16633 256 aa12.55□□□□□ -0.4
PPFIA3-213ENST00000602905 OR4A47Q6IF82 309 aa12.55□□□□□ -0.4
PPFIA3-213ENST00000602905 TREML4Q6UXN2 200 aa12.55□□□□□ -0.4
PPFIA3-213ENST00000602905 MINDY2Q8NBR6 621 aa12.55□□□□□ -0.4
PPFIA3-213ENST00000602905 FAM110DQ8TAY7 271 aaPredicted RBP12.55□□□□□ -0.4
PPFIA3-213ENST00000602905 SRSF12Q8WXF0 261 aaKnown RBP12.55□□□□□ -0.4
PPFIA3-213ENST00000602905 SPIN2AQ99865 258 aa12.55□□□□□ -0.4
PPFIA3-213ENST00000602905 SPIN2BQ9BPZ2 258 aa12.55□□□□□ -0.4
PPFIA3-213ENST00000602905 B3GALNT1O75752 331 aa12.54□□□□□ -0.4
PPFIA3-213ENST00000602905 ATG12O94817 140 aa12.54□□□□□ -0.4
PPFIA3-213ENST00000602905 TSPAN15O95858 294 aa12.54□□□□□ -0.4
PPFIA3-213ENST00000602905 RPLP1P05386 114 aaKnown RBP12.54□□□□□ -0.4
PPFIA3-213ENST00000602905 EGR2P11161 476 aaPredicted RBP12.54□□□□□ -0.4
PPFIA3-213ENST00000602905 RPA2P15927 270 aa12.54□□□□□ -0.4
PPFIA3-213ENST00000602905 RPL8P62917 257 aaKnown RBP12.54□□□□□ -0.4
PPFIA3-213ENST00000602905 LINC00299Q6ZSB3 139 aa12.54□□□□□ -0.4
PPFIA3-213ENST00000602905 KLHL30-AS1Q8NEE0 82 aa12.54□□□□□ -0.4
PPFIA3-213ENST00000602905 ZNF355PQ9NSJ1 428 aa12.54□□□□□ -0.4
PPFIA3-213ENST00000602905 TMEM140Q9NV12 185 aa12.54□□□□□ -0.4
PPFIA3-213ENST00000602905 TEX13DA0A0J9YY54 714 aaPredicted RBP12.53□□□□□ -0.4
PPFIA3-213ENST00000602905 C3orf85A0A1B0GTC6 90 aa12.53□□□□□ -0.4
PPFIA3-213ENST00000602905 MSGN1A6NI15 193 aa12.53□□□□□ -0.4
PPFIA3-213ENST00000602905 MARCH11A6NNE9 402 aa12.53□□□□□ -0.4
PPFIA3-213ENST00000602905 H0Y980 276 aa12.53□□□□□ -0.4
PPFIA3-213ENST00000602905 SNAPC5O75971 98 aa12.53□□□□□ -0.4
PPFIA3-213ENST00000602905 KRASP01116 189 aa12.53□□□□□ -0.4
PPFIA3-213ENST00000602905 IGLV1-40P01703 118 aa12.53□□□□□ -0.4
PPFIA3-213ENST00000602905 PF4P02776 101 aa12.53□□□□□ -0.4
PPFIA3-213ENST00000602905 PSMB8P28062 276 aa12.53□□□□□ -0.4
PPFIA3-213ENST00000602905 RPL27AP46776 148 aaKnown RBP12.53□□□□□ -0.4
PPFIA3-213ENST00000602905 ZNF585BQ52M93 769 aa12.53□□□□□ -0.4
PPFIA3-213ENST00000602905 RNF152Q8N8N0 203 aa12.53□□□□□ -0.4
PPFIA3-213ENST00000602905 NAP1L6A6NFF2 107 aa12.52□□□□□ -0.41
PPFIA3-213ENST00000602905 CENPXA8MT69 81 aa12.52□□□□□ -0.41
PPFIA3-213ENST00000602905 ADARB2-AS1A8MUL3 147 aa12.52□□□□□ -0.41
PPFIA3-213ENST00000602905 H3BUA1 57 aa12.52□□□□□ -0.41
PPFIA3-213ENST00000602905 UPK2O00526 184 aa12.52□□□□□ -0.41
PPFIA3-213ENST00000602905 HLA-GP17693 338 aa12.52□□□□□ -0.41
PPFIA3-213ENST00000602905 G6PCP35575 357 aa12.52□□□□□ -0.41
PPFIA3-213ENST00000602905 CDX1P47902 265 aaPredicted RBP12.52□□□□□ -0.41
PPFIA3-213ENST00000602905 RAB9AP51151 201 aa12.52□□□□□ -0.41
PPFIA3-213ENST00000602905 SSBP2P81877 361 aaPredicted RBP12.52□□□□□ -0.41
PPFIA3-213ENST00000602905 MRGPRG-AS1Q2M3A8 158 aa12.52□□□□□ -0.41
PPFIA3-213ENST00000602905 TRIM16LQ309B1 348 aa12.52□□□□□ -0.41
PPFIA3-213ENST00000602905 C19orf54Q5BKX5 351 aa12.52□□□□□ -0.41
PPFIA3-213ENST00000602905 LCNL1Q6ZST4 164 aa12.52□□□□□ -0.41
PPFIA3-213ENST00000602905 SLC25A42Q86VD7 318 aa12.52□□□□□ -0.41
PPFIA3-213ENST00000602905 ZNF695Q8IW36 515 aa12.52□□□□□ -0.41
PPFIA3-213ENST00000602905 OR5T1Q8NG75 326 aa12.52□□□□□ -0.41
PPFIA3-213ENST00000602905 S100ZQ8WXG8 99 aa12.52□□□□□ -0.41
PPFIA3-213ENST00000602905 FYTTD1Q96QD9 318 aaKnown RBP12.52□□□□□ -0.41
PPFIA3-213ENST00000602905 TSC22D3Q99576 134 aa12.52□□□□□ -0.41
PPFIA3-213ENST00000602905 COMMD5Q9GZQ3 224 aa12.52□□□□□ -0.41
PPFIA3-213ENST00000602905 SLA2Q9H6Q3 261 aa12.52□□□□□ -0.41
PPFIA3-213ENST00000602905 PTTG2Q9NZH5 202 aa12.52□□□□□ -0.41
PPFIA3-213ENST00000602905 GPR132Q9UNW8 380 aa12.52□□□□□ -0.41
PPFIA3-213ENST00000602905 H2BFWTQ7Z2G1 175 aa12.51□□□□□ -0.41
PPFIA3-213ENST00000602905 SGPP2Q8IWX5 399 aa12.51□□□□□ -0.41
PPFIA3-213ENST00000602905 CADM3Q8N126 398 aa12.51□□□□□ -0.41
PPFIA3-213ENST00000602905 MRGPRFQ96AM1 343 aa12.51□□□□□ -0.41
PPFIA3-213ENST00000602905 UBE2E2Q96LR5 201 aa12.51□□□□□ -0.41
PPFIA3-213ENST00000602905 RTBDNQ9BSG5 229 aaPredicted RBP12.51□□□□□ -0.41
PPFIA3-213ENST00000602905 C5orf66Q9H5L9 145 aa12.51□□□□□ -0.41
PPFIA3-213ENST00000602905 COA4Q9NYJ1 87 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms