RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 ZC2HC1AQ96GY0 325 aa4.14□□□□□ -1.75
SPTBN1-206ENST00000602898 NRTNQ99748 197 aa4.14□□□□□ -1.75
SPTBN1-206ENST00000602898 HSPB9Q9BQS6 159 aa4.14□□□□□ -1.75
SPTBN1-206ENST00000602898 C1QTNF4Q9BXJ3 329 aa4.14□□□□□ -1.75
SPTBN1-206ENST00000602898 WDR61Q9GZS3 305 aaKnown RBP4.14□□□□□ -1.75
SPTBN1-206ENST00000602898 KCNIP1Q9NZI2 227 aa4.14□□□□□ -1.75
SPTBN1-206ENST00000602898 CYSLTR1Q9Y271 337 aa4.14□□□□□ -1.75
SPTBN1-206ENST00000602898 SIRT4Q9Y6E7 314 aaPredicted RBP4.14□□□□□ -1.75
SPTBN1-206ENST00000602898 FER1L5A0AVI2 2057 aa4.14□□□□□ -1.75
SPTBN1-206ENST00000602898 NUP205Q92621 2012 aa4.14□□□□□ -1.75
SPTBN1-206ENST00000602898 PLXNA1Q9UIW2 1896 aa4.14□□□□□ -1.75
SPTBN1-206ENST00000602898 NCKAP5O14513 1909 aa4.14□□□□□ -1.75
SPTBN1-206ENST00000602898 A0A087WUU8 490 aa4.14□□□□□ -1.75
SPTBN1-206ENST00000602898 MSGN1A6NI15 193 aa4.14□□□□□ -1.75
SPTBN1-206ENST00000602898 FABP5P3A8MUU1 101 aa4.14□□□□□ -1.75
SPTBN1-206ENST00000602898 CYB5AP00167 134 aa4.14□□□□□ -1.75
SPTBN1-206ENST00000602898 HIST1H1TP22492 207 aaPredicted RBP4.14□□□□□ -1.75
SPTBN1-206ENST00000602898 FAM53BQ14153 422 aa4.14□□□□□ -1.75
SPTBN1-206ENST00000602898 KIAA1644Q3SXP7 199 aa4.14□□□□□ -1.75
SPTBN1-206ENST00000602898 ZNF506Q5JVG8 444 aa4.14□□□□□ -1.75
SPTBN1-206ENST00000602898 FAM162BQ5T6X4 162 aa4.14□□□□□ -1.75
SPTBN1-206ENST00000602898 FNDC7Q5VTL7 733 aa4.14□□□□□ -1.75
SPTBN1-206ENST00000602898 Q8N3U1 123 aa4.14□□□□□ -1.75
SPTBN1-206ENST00000602898 TTC9CQ8N5M4 171 aa4.14□□□□□ -1.75
SPTBN1-206ENST00000602898 OR4A5Q8NH83 315 aa4.14□□□□□ -1.75
SPTBN1-206ENST00000602898 SPACA5Q96QH8 159 aa4.14□□□□□ -1.75
SPTBN1-206ENST00000602898 C19orf24Q9BVV8 132 aa4.14□□□□□ -1.75
SPTBN1-206ENST00000602898 TMEM126AQ9H061 195 aa4.14□□□□□ -1.75
SPTBN1-206ENST00000602898 ISG20L2Q9H9L3 353 aaKnown RBP4.14□□□□□ -1.75
SPTBN1-206ENST00000602898 SERTAD4Q9NUC0 356 aa4.14□□□□□ -1.75
SPTBN1-206ENST00000602898 ZNF443Q9Y2A4 671 aaPredicted RBP4.14□□□□□ -1.75
SPTBN1-206ENST00000602898 SCN8AQ9UQD0 1980 aa4.13□□□□□ -1.75
SPTBN1-206ENST00000602898 TEX48A0A1B0GUV7 120 aa4.13□□□□□ -1.75
SPTBN1-206ENST00000602898 TRIAP1O43715 76 aa4.13□□□□□ -1.75
SPTBN1-206ENST00000602898 ZNF708P17019 499 aa4.13□□□□□ -1.75
SPTBN1-206ENST00000602898 MDKP21741 143 aaPredicted RBP4.13□□□□□ -1.75
SPTBN1-206ENST00000602898 NPY1RP25929 384 aa4.13□□□□□ -1.75
SPTBN1-206ENST00000602898 PGFP49763 221 aa4.13□□□□□ -1.75
SPTBN1-206ENST00000602898 EMDP50402 254 aa4.13□□□□□ -1.75
SPTBN1-206ENST00000602898 EMP1P54849 157 aa4.13□□□□□ -1.75
SPTBN1-206ENST00000602898 LCN6P62502 163 aa4.13□□□□□ -1.75
SPTBN1-206ENST00000602898 ADIRFQ15847 76 aa4.13□□□□□ -1.75
SPTBN1-206ENST00000602898 PMCHL1Q16048 86 aa4.13□□□□□ -1.75
SPTBN1-206ENST00000602898 CEACAM19Q7Z692 300 aa4.13□□□□□ -1.75
SPTBN1-206ENST00000602898 ZPLD1Q8TCW7 415 aa4.13□□□□□ -1.75
SPTBN1-206ENST00000602898 DNAJC30Q96LL9 226 aa4.13□□□□□ -1.75
SPTBN1-206ENST00000602898 C2orf48Q96LS8 159 aa4.13□□□□□ -1.75
SPTBN1-206ENST00000602898 ARRDC1-AS1Q9H2J1 176 aa4.13□□□□□ -1.75
SPTBN1-206ENST00000602898 NUDT4Q9NZJ9 180 aa4.13□□□□□ -1.75
SPTBN1-206ENST00000602898 AK3Q9UIJ7 227 aa4.13□□□□□ -1.75
SPTBN1-206ENST00000602898 RARRES3Q9UL19 164 aa4.13□□□□□ -1.75
SPTBN1-206ENST00000602898 GAGE12JA6NER3 117 aa4.13□□□□□ -1.75
SPTBN1-206ENST00000602898 H0YIZ8 118 aa4.13□□□□□ -1.75
SPTBN1-206ENST00000602898 ARL6IP5O75915 188 aa4.13□□□□□ -1.75
SPTBN1-206ENST00000602898 GAGE7O76087 117 aa4.13□□□□□ -1.75
SPTBN1-206ENST00000602898 CPSF4O95639 269 aaKnown RBP4.13□□□□□ -1.75
SPTBN1-206ENST00000602898 GAGE12FP0CL80 117 aa4.13□□□□□ -1.75
SPTBN1-206ENST00000602898 GAGE12GP0CL81 117 aa4.13□□□□□ -1.75
SPTBN1-206ENST00000602898 GAGE12IP0CL82 117 aa4.13□□□□□ -1.75
SPTBN1-206ENST00000602898 HTR1DP28221 377 aa4.13□□□□□ -1.75
SPTBN1-206ENST00000602898 B3GALT5-AS1P59052 145 aa4.13□□□□□ -1.75
SPTBN1-206ENST00000602898 GRB2P62993 217 aaKnown RBP4.13□□□□□ -1.75
SPTBN1-206ENST00000602898 ADIGQ0VDE8 80 aa4.13□□□□□ -1.75
SPTBN1-206ENST00000602898 GAGE4Q13068 117 aa4.13□□□□□ -1.75
SPTBN1-206ENST00000602898 RUNX3Q13761 415 aa4.13□□□□□ -1.75
SPTBN1-206ENST00000602898 MLANAQ16655 118 aa4.13□□□□□ -1.75
SPTBN1-206ENST00000602898 GLIPR1L1Q6UWM5 242 aa4.13□□□□□ -1.75
SPTBN1-206ENST00000602898 MOB1BQ7L9L4 216 aa4.13□□□□□ -1.75
SPTBN1-206ENST00000602898 SLC25A42Q86VD7 318 aa4.13□□□□□ -1.75
SPTBN1-206ENST00000602898 CLECL1Q8IZS7 167 aa4.13□□□□□ -1.75
SPTBN1-206ENST00000602898 TMEM256Q8N2U0 113 aa4.13□□□□□ -1.75
SPTBN1-206ENST00000602898 TMEM99Q8N816 258 aa4.13□□□□□ -1.75
SPTBN1-206ENST00000602898 GATD1Q8NB37 220 aa4.13□□□□□ -1.75
SPTBN1-206ENST00000602898 MLST8Q9BVC4 326 aa4.13□□□□□ -1.75
SPTBN1-206ENST00000602898 R3HDMLQ9H3Y0 253 aa4.13□□□□□ -1.75
SPTBN1-206ENST00000602898 VDAC3Q9Y277 283 aa4.13□□□□□ -1.75
SPTBN1-206ENST00000602898 HEATR5AQ86XA9 2040 aa4.13□□□□□ -1.75
SPTBN1-206ENST00000602898 SCN1AP35498 2009 aa4.13□□□□□ -1.75
SPTBN1-206ENST00000602898 A0A1W2PP11 408 aa4.12□□□□□ -1.75
SPTBN1-206ENST00000602898 hADV38S2A0JD32 116 aa4.12□□□□□ -1.75
SPTBN1-206ENST00000602898 A6NDN8 102 aa4.12□□□□□ -1.75
SPTBN1-206ENST00000602898 RBMY1CP0DJD4 496 aa4.12□□□□□ -1.75
SPTBN1-206ENST00000602898 SRP14P37108 136 aaKnown RBP4.12□□□□□ -1.75
SPTBN1-206ENST00000602898 CX3CL1P78423 397 aa4.12□□□□□ -1.75
SPTBN1-206ENST00000602898 ZNF791Q3KP31 576 aaPredicted RBP4.12□□□□□ -1.75
SPTBN1-206ENST00000602898 ZNF880Q6PDB4 577 aa4.12□□□□□ -1.75
SPTBN1-206ENST00000602898 AGTRAPQ6RW13 159 aa4.12□□□□□ -1.75
SPTBN1-206ENST00000602898 ZCCHC24Q8N2G6 241 aaKnown RBP4.12□□□□□ -1.75
SPTBN1-206ENST00000602898 CYB561D1Q8N8Q1 229 aa4.12□□□□□ -1.75
SPTBN1-206ENST00000602898 ZNF439Q8NDP4 499 aa4.12□□□□□ -1.75
SPTBN1-206ENST00000602898 OR51G1Q8NGK1 321 aa4.12□□□□□ -1.75
SPTBN1-206ENST00000602898 SDF2Q99470 211 aa4.12□□□□□ -1.75
SPTBN1-206ENST00000602898 RARRES2Q99969 163 aa4.12□□□□□ -1.75
SPTBN1-206ENST00000602898 LINC00597Q9H2U6 94 aa4.12□□□□□ -1.75
SPTBN1-206ENST00000602898 ZNF442Q9H7R0 627 aa4.12□□□□□ -1.75
SPTBN1-206ENST00000602898 ST20Q9HBF5 79 aa4.12□□□□□ -1.75
SPTBN1-206ENST00000602898 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.12□□□□□ -1.75
SPTBN1-206ENST00000602898 ANKRD36A6QL64 1941 aa4.12□□□□□ -1.75
SPTBN1-206ENST00000602898 SCN10AQ9Y5Y9 1956 aa4.12□□□□□ -1.75
SPTBN1-206ENST00000602898 TRBV5-7A0A0A0MS05 114 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms