RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 IGHG4P01861 327 aa10.9□□□□□ -0.66
RNF40-212ENST00000602784 CD28P10747 220 aa10.9□□□□□ -0.66
RNF40-212ENST00000602784 PPIFP30405 207 aaKnown RBP10.9□□□□□ -0.66
RNF40-212ENST00000602784 MAS1LP35410 378 aa10.9□□□□□ -0.66
RNF40-212ENST00000602784 SSBP2P81877 361 aaPredicted RBP10.9□□□□□ -0.66
RNF40-212ENST00000602784 FOXE3Q13461 319 aa10.9□□□□□ -0.66
RNF40-212ENST00000602784 C19orf54Q5BKX5 351 aa10.9□□□□□ -0.66
RNF40-212ENST00000602784 OR4A47Q6IF82 309 aa10.9□□□□□ -0.66
RNF40-212ENST00000602784 ZNF329Q86UD4 541 aa10.9□□□□□ -0.66
RNF40-212ENST00000602784 RNF152Q8N8N0 203 aa10.9□□□□□ -0.66
RNF40-212ENST00000602784 MINDY2Q8NBR6 621 aa10.9□□□□□ -0.66
RNF40-212ENST00000602784 ARPC1AQ92747 370 aa10.9□□□□□ -0.66
RNF40-212ENST00000602784 R3HDM4Q96D70 268 aa10.9□□□□□ -0.66
RNF40-212ENST00000602784 TMEM68Q96MH6 324 aa10.9□□□□□ -0.66
RNF40-212ENST00000602784 WDR12Q9GZL7 423 aaKnown RBP10.9□□□□□ -0.66
RNF40-212ENST00000602784 ZNF430Q9H8G1 570 aaPredicted RBP10.9□□□□□ -0.66
RNF40-212ENST00000602784 FBXO7Q9Y3I1 522 aa10.9□□□□□ -0.66
RNF40-212ENST00000602784 C3orf85A0A1B0GTC6 90 aa10.89□□□□□ -0.67
RNF40-212ENST00000602784 MARCH11A6NNE9 402 aa10.89□□□□□ -0.67
RNF40-212ENST00000602784 CENPXA8MT69 81 aa10.89□□□□□ -0.67
RNF40-212ENST00000602784 ACTL6BO94805 426 aa10.89□□□□□ -0.67
RNF40-212ENST00000602784 OPN1MWP04001 364 aa10.89□□□□□ -0.67
RNF40-212ENST00000602784 SERPINE2P07093 398 aa10.89□□□□□ -0.67
RNF40-212ENST00000602784 OPN1MW2P0DN77 364 aa10.89□□□□□ -0.67
RNF40-212ENST00000602784 OPN1MW3P0DN78 364 aa10.89□□□□□ -0.67
RNF40-212ENST00000602784 ERVK-16P61578 105 aa10.89□□□□□ -0.67
RNF40-212ENST00000602784 TCTEX1D4Q5JR98 221 aa10.89□□□□□ -0.67
RNF40-212ENST00000602784 C10orf99Q6UWK7 81 aa10.89□□□□□ -0.67
RNF40-212ENST00000602784 NDUFA11Q86Y39 141 aa10.89□□□□□ -0.67
RNF40-212ENST00000602784 VSIG4Q9Y279 399 aa10.89□□□□□ -0.67
RNF40-212ENST00000602784 WSB1Q9Y6I7 421 aa10.89□□□□□ -0.67
RNF40-212ENST00000602784 TEX13DA0A0J9YY54 714 aaPredicted RBP10.88□□□□□ -0.67
RNF40-212ENST00000602784 CRYM-AS1A6NIL9 109 aa10.88□□□□□ -0.67
RNF40-212ENST00000602784 G3V318 75 aa10.88□□□□□ -0.67
RNF40-212ENST00000602784 UPK2O00526 184 aa10.88□□□□□ -0.67
RNF40-212ENST00000602784 KRASP01116 189 aa10.88□□□□□ -0.67
RNF40-212ENST00000602784 IGLV1-40P01703 118 aa10.88□□□□□ -0.67
RNF40-212ENST00000602784 ELANEP08246 267 aa10.88□□□□□ -0.67
RNF40-212ENST00000602784 UCP1P25874 307 aa10.88□□□□□ -0.67
RNF40-212ENST00000602784 GNB1P62873 340 aa10.88□□□□□ -0.67
RNF40-212ENST00000602784 RPL8P62917 257 aaKnown RBP10.88□□□□□ -0.67
RNF40-212ENST00000602784 ZNF846Q147U1 533 aa10.88□□□□□ -0.67
RNF40-212ENST00000602784 SSX9Q7RTT3 188 aa10.88□□□□□ -0.67
RNF40-212ENST00000602784 C11orf44Q8N8P7 122 aa10.88□□□□□ -0.67
RNF40-212ENST00000602784 DMBX1Q8NFW5 382 aa10.88□□□□□ -0.67
RNF40-212ENST00000602784 ABHD5Q8WTS1 349 aa10.88□□□□□ -0.67
RNF40-212ENST00000602784 TP53RKQ96S44 253 aa10.88□□□□□ -0.67
RNF40-212ENST00000602784 CITED2Q99967 270 aaPredicted RBP10.88□□□□□ -0.67
RNF40-212ENST00000602784 NAA60Q9H7X0 242 aa10.88□□□□□ -0.67
RNF40-212ENST00000602784 ZFP57Q9NU63 452 aa10.88□□□□□ -0.67
RNF40-212ENST00000602784 TMEM140Q9NV12 185 aa10.88□□□□□ -0.67
RNF40-212ENST00000602784 TSSC4Q9Y5U2 329 aaPredicted RBP10.88□□□□□ -0.67
RNF40-212ENST00000602784 DNHD1Q96M86 4753 aa10.87□□□□□ -0.67
RNF40-212ENST00000602784 TCRBV4S1A1TA0A5B7 111 aa10.87□□□□□ -0.67
RNF40-212ENST00000602784 MSGN1A6NI15 193 aa10.87□□□□□ -0.67
RNF40-212ENST00000602784 M0QZ24 198 aa10.87□□□□□ -0.67
RNF40-212ENST00000602784 ATG12O94817 140 aa10.87□□□□□ -0.67
RNF40-212ENST00000602784 IGKV1-39P01597 117 aa10.87□□□□□ -0.67
RNF40-212ENST00000602784 IGKV1D-39P04432 117 aa10.87□□□□□ -0.67
RNF40-212ENST00000602784 PSMB8P28062 276 aa10.87□□□□□ -0.67
RNF40-212ENST00000602784 RBMS2Q15434 407 aaKnown RBP10.87□□□□□ -0.67
RNF40-212ENST00000602784 TNXAQ16473 311 aa10.87□□□□□ -0.67
RNF40-212ENST00000602784 SGPP2Q8IWX5 399 aa10.87□□□□□ -0.67
RNF40-212ENST00000602784 LFNGQ8NES3 379 aa10.87□□□□□ -0.67
RNF40-212ENST00000602784 OR5M8Q8NGP6 311 aa10.87□□□□□ -0.67
RNF40-212ENST00000602784 GRPEL2Q8TAA5 225 aa10.87□□□□□ -0.67
RNF40-212ENST00000602784 SRSF12Q8WXF0 261 aaKnown RBP10.87□□□□□ -0.67
RNF40-212ENST00000602784 GALNT14Q96FL9 552 aa10.87□□□□□ -0.67
RNF40-212ENST00000602784 SEC22AQ96IW7 307 aa10.87□□□□□ -0.67
RNF40-212ENST00000602784 SPIN2AQ99865 258 aa10.87□□□□□ -0.67
RNF40-212ENST00000602784 SPIN2BQ9BPZ2 258 aa10.87□□□□□ -0.67
RNF40-212ENST00000602784 TMEM222Q9H0R3 208 aa10.87□□□□□ -0.67
RNF40-212ENST00000602784 FOXA2Q9Y261 457 aaPredicted RBP10.87□□□□□ -0.67
RNF40-212ENST00000602784 KCNIP3Q9Y2W7 256 aa10.87□□□□□ -0.67
RNF40-212ENST00000602784 PLA2G10O15496 165 aa10.86□□□□□ -0.67
RNF40-212ENST00000602784 NDUFB6O95139 128 aa10.86□□□□□ -0.67
RNF40-212ENST00000602784 BRI3O95415 125 aa10.86□□□□□ -0.67
RNF40-212ENST00000602784 CDS2O95674 445 aa10.86□□□□□ -0.67
RNF40-212ENST00000602784 HLA-GP17693 338 aa10.86□□□□□ -0.67
RNF40-212ENST00000602784 SLC6A1P30531 599 aa10.86□□□□□ -0.67
RNF40-212ENST00000602784 G6PCP35575 357 aa10.86□□□□□ -0.67
RNF40-212ENST00000602784 DHODHQ02127 395 aa10.86□□□□□ -0.67
RNF40-212ENST00000602784 ECSCRQ19T08 205 aa10.86□□□□□ -0.67
RNF40-212ENST00000602784 C2orf68Q2NKX9 166 aa10.86□□□□□ -0.67
RNF40-212ENST00000602784 CXorf66Q5JRM2 361 aaPredicted RBP10.86□□□□□ -0.67
RNF40-212ENST00000602784 UNQ5815/PRO19632Q6UWF5 114 aa10.86□□□□□ -0.67
RNF40-212ENST00000602784 ADAD2Q8NCV1 583 aaKnown RBP10.86□□□□□ -0.67
RNF40-212ENST00000602784 GLYATL2Q8WU03 294 aa10.86□□□□□ -0.67
RNF40-212ENST00000602784 TMEM230Q96A57 120 aa10.86□□□□□ -0.67
RNF40-212ENST00000602784 TSC22D3Q99576 134 aa10.86□□□□□ -0.67
RNF40-212ENST00000602784 FAM103A1Q9BTL3 118 aaKnown RBP10.86□□□□□ -0.67
RNF40-212ENST00000602784 TET2Q6N021 2002 aaPredicted RBP10.85□□□□□ -0.67
RNF40-212ENST00000602784 LINC00854A0A1B0GVQ3 168 aa10.85□□□□□ -0.67
RNF40-212ENST00000602784 ADARB2-AS1A8MUL3 147 aa10.85□□□□□ -0.67
RNF40-212ENST00000602784 LYRM1O43325 122 aa10.85□□□□□ -0.67
RNF40-212ENST00000602784 SNAPC5O75971 98 aa10.85□□□□□ -0.67
RNF40-212ENST00000602784 OR5AC1P0C628 307 aa10.85□□□□□ -0.67
RNF40-212ENST00000602784 BTCP35070 178 aa10.85□□□□□ -0.67
RNF40-212ENST00000602784 RPL27AP46776 148 aaKnown RBP10.85□□□□□ -0.67
RNF40-212ENST00000602784 CCR6P51684 374 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 134.6 ms