RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 UBE2NLQ5JXB2 153 aa16.15■□□□□ 0.18
PPFIA3-209ENST00000602783 XRCC3O43542 346 aa16.14■□□□□ 0.17
PPFIA3-209ENST00000602783 OR2A4O95047 310 aa16.14■□□□□ 0.17
PPFIA3-209ENST00000602783 CSN3P07498 182 aa16.14■□□□□ 0.17
PPFIA3-209ENST00000602783 RPS19P39019 145 aaKnown RBP16.14■□□□□ 0.17
PPFIA3-209ENST00000602783 CBX5P45973 191 aa16.14■□□□□ 0.17
PPFIA3-209ENST00000602783 RHOGP84095 191 aa16.14■□□□□ 0.17
PPFIA3-209ENST00000602783 ZNF45Q02386 682 aa16.14■□□□□ 0.17
PPFIA3-209ENST00000602783 MSMO1Q15800 293 aa16.14■□□□□ 0.17
PPFIA3-209ENST00000602783 VSTM2AQ8TAG5 236 aa16.14■□□□□ 0.17
PPFIA3-209ENST00000602783 OR2A7Q96R45 310 aa16.14■□□□□ 0.17
PPFIA3-209ENST00000602783 AKIP1Q9NQ31 210 aa16.14■□□□□ 0.17
PPFIA3-209ENST00000602783 FAM223BA6NKX1 122 aa16.13■□□□□ 0.17
PPFIA3-209ENST00000602783 KIR2DS2P43631 304 aa16.13■□□□□ 0.17
PPFIA3-209ENST00000602783 FXYD4P59646 89 aa16.13■□□□□ 0.17
PPFIA3-209ENST00000602783 EXOSC2Q13868 293 aaKnown RBP16.13■□□□□ 0.17
PPFIA3-209ENST00000602783 FAM223AQ8IWN6 122 aa16.13■□□□□ 0.17
PPFIA3-209ENST00000602783 PUSL1Q8N0Z8 303 aaKnown RBP16.13■□□□□ 0.17
PPFIA3-209ENST00000602783 SAMD12Q8N8I0 201 aa16.13■□□□□ 0.17
PPFIA3-209ENST00000602783 TMEM167AQ8TBQ9 72 aa16.13■□□□□ 0.17
PPFIA3-209ENST00000602783 S100A16Q96FQ6 103 aaKnown RBP16.13■□□□□ 0.17
PPFIA3-209ENST00000602783 SLC5A7Q9GZV3 580 aa16.13■□□□□ 0.17
PPFIA3-209ENST00000602783 IFT46Q9NQC8 304 aa16.13■□□□□ 0.17
PPFIA3-209ENST00000602783 RYR2Q92736 4967 aa16.12■□□□□ 0.17
PPFIA3-209ENST00000602783 HMX3A6NHT5 357 aa16.12■□□□□ 0.17
PPFIA3-209ENST00000602783 TEX22C9J3V5 150 aa16.12■□□□□ 0.17
PPFIA3-209ENST00000602783 ZFAND6Q6FIF0 208 aa16.12■□□□□ 0.17
PPFIA3-209ENST00000602783 SSX9Q7RTT3 188 aa16.12■□□□□ 0.17
PPFIA3-209ENST00000602783 TMEM17Q86X19 198 aa16.12■□□□□ 0.17
PPFIA3-209ENST00000602783 TTC9CQ8N5M4 171 aa16.12■□□□□ 0.17
PPFIA3-209ENST00000602783 OR5AP2Q8NGF4 316 aa16.12■□□□□ 0.17
PPFIA3-209ENST00000602783 SIGLEC8Q9NYZ4 499 aa16.12■□□□□ 0.17
PPFIA3-209ENST00000602783 TRBV9A0A0B4J1U6 114 aa16.11■□□□□ 0.17
PPFIA3-209ENST00000602783 HRASP01112 189 aa16.11■□□□□ 0.17
PPFIA3-209ENST00000602783 RPL27AP46776 148 aaKnown RBP16.11■□□□□ 0.17
PPFIA3-209ENST00000602783 TAS2R20P59543 309 aa16.11■□□□□ 0.17
PPFIA3-209ENST00000602783 TMEM69Q5SWH9 247 aa16.11■□□□□ 0.17
PPFIA3-209ENST00000602783 LCN12Q6JVE5 192 aa16.11■□□□□ 0.17
PPFIA3-209ENST00000602783 C19orf35Q6ZS72 473 aa16.11■□□□□ 0.17
PPFIA3-209ENST00000602783 GTSCR1Q86UQ5 136 aa16.11■□□□□ 0.17
PPFIA3-209ENST00000602783 SPAG16Q8N0X2 631 aa16.11■□□□□ 0.17
PPFIA3-209ENST00000602783 ZBTB34Q8NCN2 500 aa16.11■□□□□ 0.17
PPFIA3-209ENST00000602783 TUBA4BQ9H853 241 aa16.11■□□□□ 0.17
PPFIA3-209ENST00000602783 GAR1Q9NY12 217 aaKnown RBP16.11■□□□□ 0.17
PPFIA3-209ENST00000602783 SACSQ9NZJ4 4579 aa16.1■□□□□ 0.17
PPFIA3-209ENST00000602783 IZUMO1RA6ND01 250 aa16.1■□□□□ 0.17
PPFIA3-209ENST00000602783 SULT1C2O00338 296 aa16.1■□□□□ 0.17
PPFIA3-209ENST00000602783 IL6RP08887 468 aaPredicted RBP16.1■□□□□ 0.17
PPFIA3-209ENST00000602783 MAS1LP35410 378 aa16.1■□□□□ 0.17
PPFIA3-209ENST00000602783 ATP5G2Q06055 141 aa16.1■□□□□ 0.17
PPFIA3-209ENST00000602783 HAGHQ16775 308 aa16.1■□□□□ 0.17
PPFIA3-209ENST00000602783 ZNF818PQ6ZRF7 136 aa16.1■□□□□ 0.17
PPFIA3-209ENST00000602783 SLC25A42Q86VD7 318 aa16.1■□□□□ 0.17
PPFIA3-209ENST00000602783 Q8N402 240 aa16.1■□□□□ 0.17
PPFIA3-209ENST00000602783 ISOC1Q96CN7 298 aa16.1■□□□□ 0.17
PPFIA3-209ENST00000602783 FYTTD1Q96QD9 318 aaKnown RBP16.1■□□□□ 0.17
PPFIA3-209ENST00000602783 SPATA25Q9BR10 227 aa16.1■□□□□ 0.17
PPFIA3-209ENST00000602783 EHFQ9NZC4 300 aa16.1■□□□□ 0.17
PPFIA3-209ENST00000602783 PEMTQ9UBM1 199 aa16.1■□□□□ 0.17
PPFIA3-209ENST00000602783 ZNF257Q9Y2Q1 563 aa16.1■□□□□ 0.17
PPFIA3-209ENST00000602783 A0A1B0GW64 132 aa16.09■□□□□ 0.17
PPFIA3-209ENST00000602783 DPPA5A6NC42 116 aa16.09■□□□□ 0.17
PPFIA3-209ENST00000602783 E7EUB6 86 aa16.09■□□□□ 0.17
PPFIA3-209ENST00000602783 BMPR1BO00238 502 aa16.09■□□□□ 0.17
PPFIA3-209ENST00000602783 OR2J3O76001 311 aa16.09■□□□□ 0.17
PPFIA3-209ENST00000602783 HERV-K104P61576 105 aa16.09■□□□□ 0.17
PPFIA3-209ENST00000602783 CATR1Q13166 79 aa16.09■□□□□ 0.17
PPFIA3-209ENST00000602783 NECAP1Q8NC96 275 aa16.09■□□□□ 0.17
PPFIA3-209ENST00000602783 GIMAP1Q8WWP7 306 aa16.09■□□□□ 0.17
PPFIA3-209ENST00000602783 SLC25A46Q96AG3 418 aa16.09■□□□□ 0.17
PPFIA3-209ENST00000602783 THAP7Q9BT49 309 aaPredicted RBP16.09■□□□□ 0.17
PPFIA3-209ENST00000602783 EDA2RQ9HAV5 297 aa16.09■□□□□ 0.17
PPFIA3-209ENST00000602783 ANAPC10Q9UM13 185 aa16.09■□□□□ 0.17
PPFIA3-209ENST00000602783 NPIPB5A8MRT5 1133 aa16.08■□□□□ 0.16
PPFIA3-209ENST00000602783 RBFOX2O43251 390 aaKnown RBP eCLIP16.08■□□□□ 0.16
PPFIA3-209ENST00000602783 ZNF735P0CB33 412 aa16.08■□□□□ 0.16
PPFIA3-209ENST00000602783 MYOD1P15172 320 aa16.08■□□□□ 0.16
PPFIA3-209ENST00000602783 NCS1P62166 190 aa16.08■□□□□ 0.16
PPFIA3-209ENST00000602783 RPL8P62917 257 aaKnown RBP16.08■□□□□ 0.16
PPFIA3-209ENST00000602783 OR4A47Q6IF82 309 aa16.08■□□□□ 0.16
PPFIA3-209ENST00000602783 OR51H1Q8NH63 302 aa16.08■□□□□ 0.16
PPFIA3-209ENST00000602783 BET1LQ9NYM9 111 aa16.08■□□□□ 0.16
PPFIA3-209ENST00000602783 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.07■□□□□ 0.16
PPFIA3-209ENST00000602783 EIF4EP06730 217 aaKnown RBP16.07■□□□□ 0.16
PPFIA3-209ENST00000602783 AREGP15514 252 aa16.07■□□□□ 0.16
PPFIA3-209ENST00000602783 HLA-GP17693 338 aa16.07■□□□□ 0.16
PPFIA3-209ENST00000602783 MECP2P51608 486 aaKnown RBP16.07■□□□□ 0.16
PPFIA3-209ENST00000602783 C15orf32Q32M92 178 aa16.07■□□□□ 0.16
PPFIA3-209ENST00000602783 KCTD12Q96CX2 325 aaKnown RBP16.07■□□□□ 0.16
PPFIA3-209ENST00000602783 FUNDC2Q9BWH2 189 aa16.07■□□□□ 0.16
PPFIA3-209ENST00000602783 HRASLSQ9HDD0 168 aa16.07■□□□□ 0.16
PPFIA3-209ENST00000602783 SLC2A9Q9NRM0 540 aa16.07■□□□□ 0.16
PPFIA3-209ENST00000602783 PMP2P02689 132 aa16.06■□□□□ 0.16
PPFIA3-209ENST00000602783 RFX2P48378 723 aa16.06■□□□□ 0.16
PPFIA3-209ENST00000602783 TAS2R31P59538 309 aa16.06■□□□□ 0.16
PPFIA3-209ENST00000602783 AADACL3Q5VUY0 350 aa16.06■□□□□ 0.16
PPFIA3-209ENST00000602783 OR4A5Q8NH83 315 aa16.06■□□□□ 0.16
PPFIA3-209ENST00000602783 AIFM2Q9BRQ8 373 aa16.06■□□□□ 0.16
PPFIA3-209ENST00000602783 LCE6AA0A183 80 aa16.05■□□□□ 0.16
PPFIA3-209ENST00000602783 PPP5D1E7EU14 171 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms