RNA–Protein interactions for RNA: ENST00000602190.1

IRF3-231, Transcript of interferon regulatory factor 3, human

TSL 3

Gene IRF3, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-231	ENST00000602190	EIF4EBP1	Q13541	118 aa	Predicted RBP	13.5	□□□□□ -0.25
IRF3-231	ENST00000602190	TMEM91	Q6ZNR0	172 aa		13.5	□□□□□ -0.25
IRF3-231	ENST00000602190	PKHD1	P08F94	4074 aa		13.49	□□□□□ -0.25
IRF3-231	ENST00000602190	CGB1	A6NKQ9	187 aa		13.49	□□□□□ -0.25
IRF3-231	ENST00000602190	KBTBD11	O94819	623 aa		13.49	□□□□□ -0.25
IRF3-231	ENST00000602190	AREG	P15514	252 aa		13.49	□□□□□ -0.25
IRF3-231	ENST00000602190	BRWD1-AS2	P59051	145 aa		13.49	□□□□□ -0.25
IRF3-231	ENST00000602190	PLA2G7	Q13093	441 aa		13.49	□□□□□ -0.25
IRF3-231	ENST00000602190	ARFRP1	Q13795	201 aa		13.49	□□□□□ -0.25
IRF3-231	ENST00000602190	SSX1	Q16384	188 aa		13.49	□□□□□ -0.25
IRF3-231	ENST00000602190	EEF1AKMT3	Q96AZ1	226 aa		13.49	□□□□□ -0.25
IRF3-231	ENST00000602190	FAM3D	Q96BQ1	224 aa		13.49	□□□□□ -0.25
IRF3-231	ENST00000602190	ZNF436	Q9C0F3	470 aa	Predicted RBP	13.49	□□□□□ -0.25
IRF3-231	ENST00000602190	TRBV7-1	A0A0A6YYK4	115 aa		13.48	□□□□□ -0.25
IRF3-231	ENST00000602190	MFSD2B	A6NFX1	497 aa		13.48	□□□□□ -0.25
IRF3-231	ENST00000602190	IGHV3-23	P01764	117 aa		13.48	□□□□□ -0.25
IRF3-231	ENST00000602190	GNAO1	P09471	354 aa		13.48	□□□□□ -0.25
IRF3-231	ENST00000602190	HIST1H1B	P16401	226 aa	Known RBP	13.48	□□□□□ -0.25
IRF3-231	ENST00000602190	RPL27A	P46776	148 aa	Known RBP	13.48	□□□□□ -0.25
IRF3-231	ENST00000602190	RPL30	P62888	115 aa	Known RBP	13.48	□□□□□ -0.25
IRF3-231	ENST00000602190	C2orf76	Q3KRA6	126 aa		13.48	□□□□□ -0.25
IRF3-231	ENST00000602190	PACRGL	Q8N7B6	248 aa		13.48	□□□□□ -0.25
IRF3-231	ENST00000602190	ZNF645	Q8N7E2	425 aa		13.48	□□□□□ -0.25
IRF3-231	ENST00000602190	CENPO	Q9BU64	300 aa		13.48	□□□□□ -0.25
IRF3-231	ENST00000602190	MAP6D1	Q9H9H5	199 aa		13.48	□□□□□ -0.25
IRF3-231	ENST00000602190	PLGRKT	Q9HBL7	147 aa		13.48	□□□□□ -0.25
IRF3-231	ENST00000602190		S4R3C0	116 aa		13.48	□□□□□ -0.25
IRF3-231	ENST00000602190	FAT2	Q9NYQ8	4349 aa		13.48	□□□□□ -0.25
IRF3-231	ENST00000602190	MUC4	Q99102	2169 aa		13.47	□□□□□ -0.25
IRF3-231	ENST00000602190	IGKV1D-8	A0A087WSZ0	117 aa		13.47	□□□□□ -0.25
IRF3-231	ENST00000602190	TMEM272	A0A1B0GTI8	110 aa		13.47	□□□□□ -0.25
IRF3-231	ENST00000602190	ZNF320	A2RRD8	509 aa		13.47	□□□□□ -0.25
IRF3-231	ENST00000602190	RAB27B	O00194	218 aa		13.47	□□□□□ -0.25
IRF3-231	ENST00000602190	S1PR2	O95136	353 aa		13.47	□□□□□ -0.25
IRF3-231	ENST00000602190	TCTA	P57738	103 aa		13.47	□□□□□ -0.25
IRF3-231	ENST00000602190	RAB11B	Q15907	218 aa		13.47	□□□□□ -0.25
IRF3-231	ENST00000602190	DHRSX	Q8N5I4	330 aa		13.47	□□□□□ -0.25
IRF3-231	ENST00000602190	STPG3	Q8N7X2	389 aa		13.47	□□□□□ -0.25
IRF3-231	ENST00000602190	VSTM2A	Q8TAG5	236 aa		13.47	□□□□□ -0.25
IRF3-231	ENST00000602190	ZNF502	Q8TBZ5	544 aa		13.47	□□□□□ -0.25
IRF3-231	ENST00000602190	RAB3C	Q96E17	227 aa		13.47	□□□□□ -0.25
IRF3-231	ENST00000602190	OR2A7	Q96R45	310 aa		13.47	□□□□□ -0.25
IRF3-231	ENST00000602190	MND1	Q9BWT6	205 aa		13.47	□□□□□ -0.25
IRF3-231	ENST00000602190	C11orf68	Q9H3H3	251 aa	Known RBP	13.47	□□□□□ -0.25
IRF3-231	ENST00000602190	C8orf4	Q9NR00	106 aa		13.47	□□□□□ -0.25
IRF3-231	ENST00000602190	AK6	Q9Y3D8	172 aa	Known RBP	13.47	□□□□□ -0.25
IRF3-231	ENST00000602190		A0A1B0GVY2	172 aa		13.46	□□□□□ -0.25
IRF3-231	ENST00000602190	DENR	O43583	198 aa	Known RBP	13.46	□□□□□ -0.25
IRF3-231	ENST00000602190	FCGR3B	O75015	233 aa		13.46	□□□□□ -0.25
IRF3-231	ENST00000602190	HLA-DQB1	P01920	261 aa		13.46	□□□□□ -0.25
IRF3-231	ENST00000602190	CLDN12	P56749	244 aa		13.46	□□□□□ -0.25
IRF3-231	ENST00000602190	SPHAR	Q15513	63 aa		13.46	□□□□□ -0.25
IRF3-231	ENST00000602190	RBPMS2	Q6ZRY4	209 aa	Known RBP	13.46	□□□□□ -0.25
IRF3-231	ENST00000602190	KCTD9	Q7L273	389 aa		13.46	□□□□□ -0.25
IRF3-231	ENST00000602190	SLC38A6	Q8IZM9	456 aa		13.46	□□□□□ -0.25
IRF3-231	ENST00000602190	VKORC1L1	Q8N0U8	176 aa		13.46	□□□□□ -0.25
IRF3-231	ENST00000602190	TMEM190	Q8WZ59	177 aa		13.46	□□□□□ -0.25
IRF3-231	ENST00000602190	CXorf58	Q96LI9	332 aa		13.46	□□□□□ -0.25
IRF3-231	ENST00000602190	RBMX2	Q9Y388	322 aa	Known RBP	13.46	□□□□□ -0.25
IRF3-231	ENST00000602190	CLEC3B	P05452	202 aa		13.45	□□□□□ -0.26
IRF3-231	ENST00000602190	HIST1H1D	P16402	221 aa	Known RBP	13.45	□□□□□ -0.26
IRF3-231	ENST00000602190	ZNF585B	Q52M93	769 aa		13.45	□□□□□ -0.26
IRF3-231	ENST00000602190	MAFIP	Q8WZ33	124 aa		13.45	□□□□□ -0.26
IRF3-231	ENST00000602190	GALNT14	Q96FL9	552 aa		13.45	□□□□□ -0.26
IRF3-231	ENST00000602190	GINS4	Q9BRT9	223 aa		13.45	□□□□□ -0.26
IRF3-231	ENST00000602190	RAB22A	Q9UL26	194 aa		13.45	□□□□□ -0.26
IRF3-231	ENST00000602190	UFC1	Q9Y3C8	167 aa		13.45	□□□□□ -0.26
IRF3-231	ENST00000602190	RBM7	Q9Y580	266 aa	Known RBP	13.45	□□□□□ -0.26
IRF3-231	ENST00000602190	DHFR	P00374	187 aa		13.44	□□□□□ -0.26
IRF3-231	ENST00000602190	MYOD1	P15172	320 aa		13.44	□□□□□ -0.26
IRF3-231	ENST00000602190	FCGR2B	P31994	310 aa	Predicted RBP	13.44	□□□□□ -0.26
IRF3-231	ENST00000602190	C8orf59	Q8N0T1	100 aa	Predicted RBP	13.44	□□□□□ -0.26
IRF3-231	ENST00000602190	OR10R2	Q8NGX6	335 aa		13.44	□□□□□ -0.26
IRF3-231	ENST00000602190	UBQLN2	Q9UHD9	624 aa		13.44	□□□□□ -0.26
IRF3-231	ENST00000602190	MRPS7	Q9Y2R9	242 aa	Known RBP	13.44	□□□□□ -0.26
IRF3-231	ENST00000602190	PRELID3B	Q9Y3B1	194 aa		13.44	□□□□□ -0.26
IRF3-231	ENST00000602190	OR2W1	Q9Y3N9	320 aa		13.44	□□□□□ -0.26
IRF3-231	ENST00000602190	DNAH2	Q9P225	4427 aa		13.44	□□□□□ -0.26
IRF3-231	ENST00000602190	SLC22A5	O76082	557 aa		13.43	□□□□□ -0.26
IRF3-231	ENST00000602190	RANBP1	P43487	201 aa		13.43	□□□□□ -0.26
IRF3-231	ENST00000602190	MRPS15	P82914	257 aa	Known RBP	13.43	□□□□□ -0.26
IRF3-231	ENST00000602190	BPIFB6	Q8NFQ5	453 aa		13.43	□□□□□ -0.26
IRF3-231	ENST00000602190	OR4S2	Q8NH73	311 aa		13.43	□□□□□ -0.26
IRF3-231	ENST00000602190	ZNF414	Q96IQ9	312 aa		13.43	□□□□□ -0.26
IRF3-231	ENST00000602190	MFF	Q9GZY8	342 aa		13.43	□□□□□ -0.26
IRF3-231	ENST00000602190	DNAH17	Q9UFH2	4485 aa		13.43	□□□□□ -0.26
IRF3-231	ENST00000602190	IGKV1D-13	A0A0B4J2D9	117 aa		13.42	□□□□□ -0.26
IRF3-231	ENST00000602190	IGLC7	A0M8Q6	106 aa		13.42	□□□□□ -0.26
IRF3-231	ENST00000602190	DPPA5	A6NC42	116 aa		13.42	□□□□□ -0.26
IRF3-231	ENST00000602190	ERICH4	A6NGS2	130 aa		13.42	□□□□□ -0.26
IRF3-231	ENST00000602190	ARL6IP5	O75915	188 aa		13.42	□□□□□ -0.26
IRF3-231	ENST00000602190	FGF2	P09038	288 aa		13.42	□□□□□ -0.26
IRF3-231	ENST00000602190	IGKV1-13	P0DP09	117 aa		13.42	□□□□□ -0.26
IRF3-231	ENST00000602190	GNB3	P16520	340 aa		13.42	□□□□□ -0.26
IRF3-231	ENST00000602190	CD36	P16671	472 aa		13.42	□□□□□ -0.26
IRF3-231	ENST00000602190	DTYMK	P23919	212 aa		13.42	□□□□□ -0.26
IRF3-231	ENST00000602190	PTBP1	P26599	531 aa	Known RBP eCLIP	13.42	□□□□□ -0.26
IRF3-231	ENST00000602190	GPR183	P32249	361 aa		13.42	□□□□□ -0.26
IRF3-231	ENST00000602190	LIPK	Q5VXJ0	399 aa		13.42	□□□□□ -0.26
IRF3-231	ENST00000602190	ATP6V0B	Q99437	205 aa		13.42	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms