RNA–Protein interactions for RNA: ENST00000601849.1

VRK3-224, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-224ENST00000601849 MAFIPQ8WZ33 124 aa7.21□□□□□ -1.26
VRK3-224ENST00000601849 WDR89Q96FK6 387 aaPredicted RBP7.21□□□□□ -1.26
VRK3-224ENST00000601849 GFI1Q99684 422 aa7.21□□□□□ -1.26
VRK3-224ENST00000601849 MGLLQ99685 303 aa7.21□□□□□ -1.26
VRK3-224ENST00000601849 ATG5Q9H1Y0 275 aa7.21□□□□□ -1.26
VRK3-224ENST00000601849 DCSTAMPQ9H295 470 aa7.21□□□□□ -1.26
VRK3-224ENST00000601849 SLC2A9Q9NRM0 540 aa7.21□□□□□ -1.26
VRK3-224ENST00000601849 KCNK7Q9Y2U2 307 aa7.21□□□□□ -1.26
VRK3-224ENST00000601849 OR2W1Q9Y3N9 320 aa7.21□□□□□ -1.26
VRK3-224ENST00000601849 TRAV1-2A0A0B4J238 106 aa7.2□□□□□ -1.26
VRK3-224ENST00000601849 HMX3A6NHT5 357 aa7.2□□□□□ -1.26
VRK3-224ENST00000601849 IFITM5A6NNB3 132 aa7.2□□□□□ -1.26
VRK3-224ENST00000601849 MFNGO00587 321 aa7.2□□□□□ -1.26
VRK3-224ENST00000601849 UBE2CO00762 179 aa7.2□□□□□ -1.26
VRK3-224ENST00000601849 RBMXL2O75526 392 aaKnown RBP7.2□□□□□ -1.26
VRK3-224ENST00000601849 SCGNO76038 276 aa7.2□□□□□ -1.26
VRK3-224ENST00000601849 KBTBD11O94819 623 aa7.2□□□□□ -1.26
VRK3-224ENST00000601849 HLA-AP01891 365 aaKnown RBP7.2□□□□□ -1.26
VRK3-224ENST00000601849 HLA-DQB1P01920 261 aa7.2□□□□□ -1.26
VRK3-224ENST00000601849 CLEC3BP05452 202 aa7.2□□□□□ -1.26
VRK3-224ENST00000601849 MYOD1P15172 320 aa7.2□□□□□ -1.26
VRK3-224ENST00000601849 RAB3BP20337 219 aa7.2□□□□□ -1.26
VRK3-224ENST00000601849 PSMB6P28072 239 aa7.2□□□□□ -1.26
VRK3-224ENST00000601849 BMI1P35226 326 aa7.2□□□□□ -1.26
VRK3-224ENST00000601849 FABP5Q01469 135 aa7.2□□□□□ -1.26
VRK3-224ENST00000601849 MRGPRG-AS1Q2M3A8 158 aa7.2□□□□□ -1.26
VRK3-224ENST00000601849 OR2B11Q5JQS5 317 aa7.2□□□□□ -1.26
VRK3-224ENST00000601849 LAMTOR1Q6IAA8 161 aa7.2□□□□□ -1.26
VRK3-224ENST00000601849 OR2C3Q8N628 320 aa7.2□□□□□ -1.26
VRK3-224ENST00000601849 OR1L6Q8NGR2 347 aa7.2□□□□□ -1.26
VRK3-224ENST00000601849 TMEM167AQ8TBQ9 72 aa7.2□□□□□ -1.26
VRK3-224ENST00000601849 MRPL27Q9P0M9 148 aaKnown RBP7.2□□□□□ -1.26
VRK3-224ENST00000601849 TP53TG1Q9Y2A0 90 aa7.2□□□□□ -1.26
VRK3-224ENST00000601849 RBMX2Q9Y388 322 aaKnown RBP7.2□□□□□ -1.26
VRK3-224ENST00000601849 UFC1Q9Y3C8 167 aa7.2□□□□□ -1.26
VRK3-224ENST00000601849 TNCP24821 2201 aa7.19□□□□□ -1.26
VRK3-224ENST00000601849 RAB27BO00194 218 aa7.19□□□□□ -1.26
VRK3-224ENST00000601849 SCAF4O95104 1147 aaKnown RBP7.19□□□□□ -1.26
VRK3-224ENST00000601849 IGHV3-23P01764 117 aa7.19□□□□□ -1.26
VRK3-224ENST00000601849 CRYGCP07315 174 aa7.19□□□□□ -1.26
VRK3-224ENST00000601849 GALP22466 123 aa7.19□□□□□ -1.26
VRK3-224ENST00000601849 ELLP55199 621 aaPredicted RBP7.19□□□□□ -1.26
VRK3-224ENST00000601849 PMS2P11Q13670 270 aa7.19□□□□□ -1.26
VRK3-224ENST00000601849 IRF3Q14653 427 aa7.19□□□□□ -1.26
VRK3-224ENST00000601849 CDNFQ49AH0 187 aa7.19□□□□□ -1.26
VRK3-224ENST00000601849 ZNF585BQ52M93 769 aa7.19□□□□□ -1.26
VRK3-224ENST00000601849 TM4SF20Q53R12 229 aa7.19□□□□□ -1.26
VRK3-224ENST00000601849 CNIH2Q6PI25 160 aa7.19□□□□□ -1.26
VRK3-224ENST00000601849 PLET1Q6UQ28 207 aa7.19□□□□□ -1.26
VRK3-224ENST00000601849 ZNF66Q6ZN08 573 aa7.19□□□□□ -1.26
VRK3-224ENST00000601849 Q6ZWC4 215 aa7.19□□□□□ -1.26
VRK3-224ENST00000601849 PRSS48Q7RTY5 328 aa7.19□□□□□ -1.26
VRK3-224ENST00000601849 TMEM61Q8N0U2 210 aa7.19□□□□□ -1.26
VRK3-224ENST00000601849 OR4A5Q8NH83 315 aa7.19□□□□□ -1.26
VRK3-224ENST00000601849 LINC00476Q8WZB0 136 aa7.19□□□□□ -1.26
VRK3-224ENST00000601849 OVOL2Q9BRP0 275 aa7.19□□□□□ -1.26
VRK3-224ENST00000601849 C6orf62Q9GZU0 229 aaPredicted RBP7.19□□□□□ -1.26
VRK3-224ENST00000601849 WFDC10AQ9H1F0 79 aa7.19□□□□□ -1.26
VRK3-224ENST00000601849 DUSP21Q9H596 190 aa7.19□□□□□ -1.26
VRK3-224ENST00000601849 SPATA2Q9UM82 520 aa7.19□□□□□ -1.26
VRK3-224ENST00000601849 ALMS1Q8TCU4 4167 aa7.19□□□□□ -1.26
VRK3-224ENST00000601849 A8MWP6 167 aa7.18□□□□□ -1.26
VRK3-224ENST00000601849 TEX22C9J3V5 150 aa7.18□□□□□ -1.26
VRK3-224ENST00000601849 SPRY2O43597 315 aa7.18□□□□□ -1.26
VRK3-224ENST00000601849 ATP6V1G2O95670 118 aa7.18□□□□□ -1.26
VRK3-224ENST00000601849 ZNF735P0CB33 412 aa7.18□□□□□ -1.26
VRK3-224ENST00000601849 CTRB1P17538 263 aa7.18□□□□□ -1.26
VRK3-224ENST00000601849 HLA-GP17693 338 aa7.18□□□□□ -1.26
VRK3-224ENST00000601849 NFYAP23511 347 aaPredicted RBP7.18□□□□□ -1.26
VRK3-224ENST00000601849 GNG2P59768 71 aa7.18□□□□□ -1.26
VRK3-224ENST00000601849 ARPC4P59998 168 aa7.18□□□□□ -1.26
VRK3-224ENST00000601849 RPL8P62917 257 aaKnown RBP7.18□□□□□ -1.26
VRK3-224ENST00000601849 C10orf55Q5SWW7 151 aa7.18□□□□□ -1.26
VRK3-224ENST00000601849 HACD4Q5VWC8 232 aa7.18□□□□□ -1.26
VRK3-224ENST00000601849 CTRB2Q6GPI1 263 aa7.18□□□□□ -1.26
VRK3-224ENST00000601849 CEMP1Q6PRD7 247 aaPredicted RBP7.18□□□□□ -1.26
VRK3-224ENST00000601849 BTNL8Q6UX41 500 aa7.18□□□□□ -1.26
VRK3-224ENST00000601849 VKORC1L1Q8N0U8 176 aa7.18□□□□□ -1.26
VRK3-224ENST00000601849 MFSD4AQ8N468 514 aa7.18□□□□□ -1.26
VRK3-224ENST00000601849 STPG3Q8N7X2 389 aa7.18□□□□□ -1.26
VRK3-224ENST00000601849 C5orf30Q96GV9 206 aa7.18□□□□□ -1.26
VRK3-224ENST00000601849 COMMD5Q9GZQ3 224 aa7.18□□□□□ -1.26
VRK3-224ENST00000601849 HRASLSQ9HDD0 168 aa7.18□□□□□ -1.26
VRK3-224ENST00000601849 MLXQ9UH92 298 aa7.18□□□□□ -1.26
VRK3-224ENST00000601849 BLOC1S6Q9UL45 172 aa7.18□□□□□ -1.26
VRK3-224ENST00000601849 RRP15Q9Y3B9 282 aaKnown RBP7.18□□□□□ -1.26
VRK3-224ENST00000601849 DMRT1Q9Y5R6 373 aa7.18□□□□□ -1.26
VRK3-224ENST00000601849 TMEM213A2RRL7 107 aa7.17□□□□□ -1.26
VRK3-224ENST00000601849 IL6RP08887 468 aaPredicted RBP7.17□□□□□ -1.26
VRK3-224ENST00000601849 CMC4P56277 68 aaPredicted RBP7.17□□□□□ -1.26
VRK3-224ENST00000601849 RPL30P62888 115 aaKnown RBP7.17□□□□□ -1.26
VRK3-224ENST00000601849 TNFRSF9Q07011 255 aa7.17□□□□□ -1.26
VRK3-224ENST00000601849 PLA2G7Q13093 441 aa7.17□□□□□ -1.26
VRK3-224ENST00000601849 CATR1Q13166 79 aa7.17□□□□□ -1.26
VRK3-224ENST00000601849 SSX9Q7RTT3 188 aa7.17□□□□□ -1.26
VRK3-224ENST00000601849 WFDC3Q8IUB2 231 aa7.17□□□□□ -1.26
VRK3-224ENST00000601849 PUSL1Q8N0Z8 303 aaKnown RBP7.17□□□□□ -1.26
VRK3-224ENST00000601849 ZBTB34Q8NCN2 500 aa7.17□□□□□ -1.26
VRK3-224ENST00000601849 CACNG8Q8WXS5 425 aa7.17□□□□□ -1.26
VRK3-224ENST00000601849 BORCS5Q969J3 196 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms