RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 DMBX1Q8NFW5 382 aa15.82■□□□□ 0.12
SHKBP1-222ENST00000600320 OR52B4Q8NGK2 314 aa15.82■□□□□ 0.12
SHKBP1-222ENST00000600320 TMEM167AQ8TBQ9 72 aa15.82■□□□□ 0.12
SHKBP1-222ENST00000600320 CASTOR1Q8WTX7 329 aa15.82■□□□□ 0.12
SHKBP1-222ENST00000600320 C16orf95Q9H693 158 aa15.82■□□□□ 0.12
SHKBP1-222ENST00000600320 BET1LQ9NYM9 111 aa15.82■□□□□ 0.12
SHKBP1-222ENST00000600320 PLXNB1O43157 2135 aa15.82■□□□□ 0.12
SHKBP1-222ENST00000600320 A0A0G2JRQ6 117 aa15.81■□□□□ 0.12
SHKBP1-222ENST00000600320 IGHG2P01859 326 aa15.81■□□□□ 0.12
SHKBP1-222ENST00000600320 CX3CL1P78423 397 aa15.81■□□□□ 0.12
SHKBP1-222ENST00000600320 DHRS2Q13268 280 aa15.81■□□□□ 0.12
SHKBP1-222ENST00000600320 IZUMO4Q1ZYL8 232 aa15.81■□□□□ 0.12
SHKBP1-222ENST00000600320 TMEM268Q5VZI3 342 aa15.81■□□□□ 0.12
SHKBP1-222ENST00000600320 LYG2Q86SG7 212 aa15.81■□□□□ 0.12
SHKBP1-222ENST00000600320 LINC01006Q8NI28 216 aa15.81■□□□□ 0.12
SHKBP1-222ENST00000600320 TMEM56Q96MV1 263 aa15.81■□□□□ 0.12
SHKBP1-222ENST00000600320 C19orf24Q9BVV8 132 aa15.81■□□□□ 0.12
SHKBP1-222ENST00000600320 ALX4Q9H161 411 aaPredicted RBP15.81■□□□□ 0.12
SHKBP1-222ENST00000600320 ZNF430Q9H8G1 570 aaPredicted RBP15.81■□□□□ 0.12
SHKBP1-222ENST00000600320 SERTAD4Q9NUC0 356 aa15.81■□□□□ 0.12
SHKBP1-222ENST00000600320 TMEM56-RWDD3S4R434 201 aa15.81■□□□□ 0.12
SHKBP1-222ENST00000600320 DNHD1Q96M86 4753 aa15.81■□□□□ 0.12
SHKBP1-222ENST00000600320 UPK2O00526 184 aa15.8■□□□□ 0.12
SHKBP1-222ENST00000600320 HLA-AP01891 365 aaKnown RBP15.8■□□□□ 0.12
SHKBP1-222ENST00000600320 OR9G9P0C7N8 305 aa15.8■□□□□ 0.12
SHKBP1-222ENST00000600320 P0C879 139 aa15.8■□□□□ 0.12
SHKBP1-222ENST00000600320 ANXA3P12429 323 aa15.8■□□□□ 0.12
SHKBP1-222ENST00000600320 MYOD1P15172 320 aa15.8■□□□□ 0.12
SHKBP1-222ENST00000600320 MDKP21741 143 aaPredicted RBP15.8■□□□□ 0.12
SHKBP1-222ENST00000600320 C4orf46Q504U0 113 aa15.8■□□□□ 0.12
SHKBP1-222ENST00000600320 PLET1Q6UQ28 207 aa15.8■□□□□ 0.12
SHKBP1-222ENST00000600320 SLC35E3Q7Z769 313 aa15.8■□□□□ 0.12
SHKBP1-222ENST00000600320 ZNF695Q8IW36 515 aa15.8■□□□□ 0.12
SHKBP1-222ENST00000600320 OR4F5Q8NH21 305 aa15.8■□□□□ 0.12
SHKBP1-222ENST00000600320 VSTM2AQ8TAG5 236 aa15.8■□□□□ 0.12
SHKBP1-222ENST00000600320 RBPMSQ93062 196 aaKnown RBP15.8■□□□□ 0.12
SHKBP1-222ENST00000600320 SEC22CQ9BRL7 303 aa15.8■□□□□ 0.12
SHKBP1-222ENST00000600320 AIFM2Q9BRQ8 373 aa15.8■□□□□ 0.12
SHKBP1-222ENST00000600320 FBXO7Q9Y3I1 522 aa15.8■□□□□ 0.12
SHKBP1-222ENST00000600320 TMEM89A2RUT3 159 aa15.79■□□□□ 0.12
SHKBP1-222ENST00000600320 PTTG1O95997 202 aa15.79■□□□□ 0.12
SHKBP1-222ENST00000600320 GNB1P62873 340 aa15.79■□□□□ 0.12
SHKBP1-222ENST00000600320 C10orf55Q5SWW7 151 aa15.79■□□□□ 0.12
SHKBP1-222ENST00000600320 LGI3Q8N145 548 aa15.79■□□□□ 0.12
SHKBP1-222ENST00000600320 SLC35G3Q8N808 338 aa15.79■□□□□ 0.12
SHKBP1-222ENST00000600320 OR4A5Q8NH83 315 aa15.79■□□□□ 0.12
SHKBP1-222ENST00000600320 OR2T6Q8NHC8 308 aa15.79■□□□□ 0.12
SHKBP1-222ENST00000600320 IL22RA2Q969J5 263 aa15.79■□□□□ 0.12
SHKBP1-222ENST00000600320 MARVELD1Q9BSK0 173 aa15.79■□□□□ 0.12
SHKBP1-222ENST00000600320 OR51J1Q9H342 316 aa15.79■□□□□ 0.12
SHKBP1-222ENST00000600320 LINC00527Q9UJ94 153 aa15.79■□□□□ 0.12
SHKBP1-222ENST00000600320 NSG2Q9Y328 171 aa15.79■□□□□ 0.12
SHKBP1-222ENST00000600320 TNCP24821 2201 aa15.78■□□□□ 0.12
SHKBP1-222ENST00000600320 INMT-MINDY4F8WBC2 141 aa15.78■□□□□ 0.12
SHKBP1-222ENST00000600320 ATP6V0E1O15342 81 aa15.78■□□□□ 0.12
SHKBP1-222ENST00000600320 EGR2P11161 476 aaPredicted RBP15.78■□□□□ 0.12
SHKBP1-222ENST00000600320 VDAC2P45880 294 aaPredicted RBP15.78■□□□□ 0.12
SHKBP1-222ENST00000600320 AKR1C2P52895 323 aa15.78■□□□□ 0.12
SHKBP1-222ENST00000600320 FXYD3Q14802 87 aa15.78■□□□□ 0.12
SHKBP1-222ENST00000600320 TNXAQ16473 311 aa15.78■□□□□ 0.12
SHKBP1-222ENST00000600320 ARSJQ5FYB0 599 aaPredicted RBP15.78■□□□□ 0.12
SHKBP1-222ENST00000600320 ZNF562Q6V9R5 426 aa15.78■□□□□ 0.12
SHKBP1-222ENST00000600320 H2BFWTQ7Z2G1 175 aa15.78■□□□□ 0.12
SHKBP1-222ENST00000600320 MMD2Q8IY49 270 aa15.78■□□□□ 0.12
SHKBP1-222ENST00000600320 CADM3Q8N126 398 aa15.78■□□□□ 0.12
SHKBP1-222ENST00000600320 FAM103A1Q9BTL3 118 aaKnown RBP15.78■□□□□ 0.12
SHKBP1-222ENST00000600320 PARP11Q9NR21 331 aa15.78■□□□□ 0.12
SHKBP1-222ENST00000600320 CLPSL1A2RUU4 121 aa15.77■□□□□ 0.12
SHKBP1-222ENST00000600320 SRPXP78539 464 aa15.77■□□□□ 0.12
SHKBP1-222ENST00000600320 LYZL2Q7Z4W2 148 aa15.77■□□□□ 0.12
SHKBP1-222ENST00000600320 LRTM2Q8N967 370 aa15.77■□□□□ 0.12
SHKBP1-222ENST00000600320 TMEM158Q8WZ71 300 aa15.77■□□□□ 0.12
SHKBP1-222ENST00000600320 GPR146Q96CH1 333 aa15.77■□□□□ 0.12
SHKBP1-222ENST00000600320 NOL4LQ96MY1 436 aaPredicted RBP15.77■□□□□ 0.12
SHKBP1-222ENST00000600320 MMP24Q9Y5R2 645 aa15.77■□□□□ 0.12
SHKBP1-222ENST00000600320 DBX1A6NMT0 343 aa15.76■□□□□ 0.11
SHKBP1-222ENST00000600320 E7EUB6 86 aa15.76■□□□□ 0.11
SHKBP1-222ENST00000600320 KCNAB3O43448 404 aa15.76■□□□□ 0.11
SHKBP1-222ENST00000600320 DUS4LO95620 317 aaKnown RBP15.76■□□□□ 0.11
SHKBP1-222ENST00000600320 IL5P05113 134 aa15.76■□□□□ 0.11
SHKBP1-222ENST00000600320 HLA-GP17693 338 aa15.76■□□□□ 0.11
SHKBP1-222ENST00000600320 OR2B8PP59922 312 aa15.76■□□□□ 0.11
SHKBP1-222ENST00000600320 RPL8P62917 257 aaKnown RBP15.76■□□□□ 0.11
SHKBP1-222ENST00000600320 RGS21Q2M5E4 152 aa15.76■□□□□ 0.11
SHKBP1-222ENST00000600320 Q6ZRM9 215 aa15.76■□□□□ 0.11
SHKBP1-222ENST00000600320 GRPEL2Q8TAA5 225 aa15.76■□□□□ 0.11
SHKBP1-222ENST00000600320 ARPC1AQ92747 370 aa15.76■□□□□ 0.11
SHKBP1-222ENST00000600320 A0A0B4J2A0 478 aa15.75■□□□□ 0.11
SHKBP1-222ENST00000600320 A0A1B0GW64 132 aa15.75■□□□□ 0.11
SHKBP1-222ENST00000600320 CGB1A6NKQ9 187 aa15.75■□□□□ 0.11
SHKBP1-222ENST00000600320 CREBL2O60519 120 aaPredicted RBP15.75■□□□□ 0.11
SHKBP1-222ENST00000600320 ATG12O94817 140 aa15.75■□□□□ 0.11
SHKBP1-222ENST00000600320 CNIH1O95406 144 aa15.75■□□□□ 0.11
SHKBP1-222ENST00000600320 OPN1MWP04001 364 aa15.75■□□□□ 0.11
SHKBP1-222ENST00000600320 OPN1MW2P0DN77 364 aa15.75■□□□□ 0.11
SHKBP1-222ENST00000600320 OPN1MW3P0DN78 364 aa15.75■□□□□ 0.11
SHKBP1-222ENST00000600320 COMPP49747 757 aaPredicted RBP15.75■□□□□ 0.11
SHKBP1-222ENST00000600320 PROK1P58294 105 aa15.75■□□□□ 0.11
SHKBP1-222ENST00000600320 FOXL1Q12952 345 aa15.75■□□□□ 0.11
SHKBP1-222ENST00000600320 AWAT1Q58HT5 328 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms