RNA–Protein interactions for RNA: ENST00000599339.1

EBI3-202, Transcript of Epstein-Barr virus induced 3, humanhuman

TSL 2

Gene EBI3, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBI3-202ENST00000599339 ELF5Q9UKW6 265 aaPredicted RBP11.04□□□□□ -0.64
EBI3-202ENST00000599339 STARD9Q9P2P6 4700 aa11.04□□□□□ -0.64
EBI3-202ENST00000599339 HMX3A6NHT5 357 aa11.03□□□□□ -0.64
EBI3-202ENST00000599339 TEX22C9J3V5 150 aa11.03□□□□□ -0.64
EBI3-202ENST00000599339 CD7P09564 240 aa11.03□□□□□ -0.64
EBI3-202ENST00000599339 HIST1H1BP16401 226 aaKnown RBP11.03□□□□□ -0.64
EBI3-202ENST00000599339 ARL3P36405 182 aa11.03□□□□□ -0.64
EBI3-202ENST00000599339 RPL30P62888 115 aaKnown RBP11.03□□□□□ -0.64
EBI3-202ENST00000599339 FAM106AQ4KMX7 169 aa11.03□□□□□ -0.64
EBI3-202ENST00000599339 IZUMO2Q6UXV1 221 aa11.03□□□□□ -0.64
EBI3-202ENST00000599339 ZNF66Q6ZN08 573 aa11.03□□□□□ -0.64
EBI3-202ENST00000599339 SLC16A13Q7RTY0 426 aa11.03□□□□□ -0.64
EBI3-202ENST00000599339 GPHB5Q86YW7 130 aa11.03□□□□□ -0.64
EBI3-202ENST00000599339 DEFB125Q8N687 156 aa11.03□□□□□ -0.64
EBI3-202ENST00000599339 NUDCD2Q8WVJ2 157 aa11.03□□□□□ -0.64
EBI3-202ENST00000599339 FAM110AQ9BQ89 295 aa11.03□□□□□ -0.64
EBI3-202ENST00000599339 AIFM2Q9BRQ8 373 aa11.03□□□□□ -0.64
EBI3-202ENST00000599339 ZC4H2Q9NQZ6 224 aa11.03□□□□□ -0.64
EBI3-202ENST00000599339 ANXA10Q9UJ72 324 aa11.03□□□□□ -0.64
EBI3-202ENST00000599339 SPATA2Q9UM82 520 aa11.03□□□□□ -0.64
EBI3-202ENST00000599339 CSMD3Q7Z407 3707 aa11.03□□□□□ -0.64
EBI3-202ENST00000599339 IGKV1D-13A0A0B4J2D9 117 aa11.02□□□□□ -0.65
EBI3-202ENST00000599339 TMEM235A6NFC5 223 aa11.02□□□□□ -0.65
EBI3-202ENST00000599339 MRPS14O60783 128 aaKnown RBP11.02□□□□□ -0.65
EBI3-202ENST00000599339 OR2C1O95371 312 aa11.02□□□□□ -0.65
EBI3-202ENST00000599339 HLA-AP01891 365 aaKnown RBP11.02□□□□□ -0.65
EBI3-202ENST00000599339 IGKV1-13P0DP09 117 aa11.02□□□□□ -0.65
EBI3-202ENST00000599339 TPRA1Q86W33 373 aa11.02□□□□□ -0.65
EBI3-202ENST00000599339 NR2C2APQ86WQ0 139 aa11.02□□□□□ -0.65
EBI3-202ENST00000599339 PUSL1Q8N0Z8 303 aaKnown RBP11.02□□□□□ -0.65
EBI3-202ENST00000599339 MFSD4AQ8N468 514 aa11.02□□□□□ -0.65
EBI3-202ENST00000599339 EEF1AKMT3Q96AZ1 226 aa11.02□□□□□ -0.65
EBI3-202ENST00000599339 TAS2R8Q9NYW2 309 aa11.02□□□□□ -0.65
EBI3-202ENST00000599339 SMIM30A4D0T7 59 aa11.01□□□□□ -0.65
EBI3-202ENST00000599339 RBMY1BA6NDE4 496 aaKnown RBP11.01□□□□□ -0.65
EBI3-202ENST00000599339 RBMY1EA6NEQ0 496 aaKnown RBP11.01□□□□□ -0.65
EBI3-202ENST00000599339 IGLV2-14P01704 120 aa11.01□□□□□ -0.65
EBI3-202ENST00000599339 CRYGCP07315 174 aa11.01□□□□□ -0.65
EBI3-202ENST00000599339 IL6RP08887 468 aaPredicted RBP11.01□□□□□ -0.65
EBI3-202ENST00000599339 RBMY1DP0C7P1 496 aaKnown RBP11.01□□□□□ -0.65
EBI3-202ENST00000599339 ZNF735P0CB33 412 aa11.01□□□□□ -0.65
EBI3-202ENST00000599339 DEFA4P12838 97 aa11.01□□□□□ -0.65
EBI3-202ENST00000599339 PSMB6P28072 239 aa11.01□□□□□ -0.65
EBI3-202ENST00000599339 FGF9P31371 208 aaPredicted RBP11.01□□□□□ -0.65
EBI3-202ENST00000599339 ARPC4P59998 168 aa11.01□□□□□ -0.65
EBI3-202ENST00000599339 GABARAPL2P60520 117 aa11.01□□□□□ -0.65
EBI3-202ENST00000599339 RPL8P62917 257 aaKnown RBP11.01□□□□□ -0.65
EBI3-202ENST00000599339 ZNF57Q68EA5 555 aaPredicted RBP11.01□□□□□ -0.65
EBI3-202ENST00000599339 OR4A47Q6IF82 309 aa11.01□□□□□ -0.65
EBI3-202ENST00000599339 CLEC19AQ6UXS0 136 aa11.01□□□□□ -0.65
EBI3-202ENST00000599339 OR4A5Q8NH83 315 aa11.01□□□□□ -0.65
EBI3-202ENST00000599339 DAPK2Q9UIK4 370 aa11.01□□□□□ -0.65
EBI3-202ENST00000599339 DMRT1Q9Y5R6 373 aa11.01□□□□□ -0.65
EBI3-202ENST00000599339 ZNF320A2RRD8 509 aa11□□□□□ -0.65
EBI3-202ENST00000599339 NDUFB8O95169 186 aa11□□□□□ -0.65
EBI3-202ENST00000599339 IGHV3-23P01764 117 aa11□□□□□ -0.65
EBI3-202ENST00000599339 AREGP15514 252 aa11□□□□□ -0.65
EBI3-202ENST00000599339 CBLN1P23435 193 aa11□□□□□ -0.65
EBI3-202ENST00000599339 MSMO1Q15800 293 aa11□□□□□ -0.65
EBI3-202ENST00000599339 ANKRD55Q3KP44 614 aa11□□□□□ -0.65
EBI3-202ENST00000599339 SSX9Q7RTT3 188 aa11□□□□□ -0.65
EBI3-202ENST00000599339 WDR89Q96FK6 387 aaPredicted RBP11□□□□□ -0.65
EBI3-202ENST00000599339 CXorf58Q96LI9 332 aa11□□□□□ -0.65
EBI3-202ENST00000599339 FANCD2OSQ96PS1 177 aa11□□□□□ -0.65
EBI3-202ENST00000599339 WFDC10AQ9H1F0 79 aa11□□□□□ -0.65
EBI3-202ENST00000599339 TXNL4BQ9NX01 149 aaKnown RBP11□□□□□ -0.65
EBI3-202ENST00000599339 BET1LQ9NYM9 111 aa11□□□□□ -0.65
EBI3-202ENST00000599339 RAB26Q9ULW5 256 aa11□□□□□ -0.65
EBI3-202ENST00000599339 RRP15Q9Y3B9 282 aaKnown RBP11□□□□□ -0.65
EBI3-202ENST00000599339 LYSTQ99698 3801 aa10.99□□□□□ -0.65
EBI3-202ENST00000599339 TRBV7-1A0A0A6YYK4 115 aa10.99□□□□□ -0.65
EBI3-202ENST00000599339 A8MWP6 167 aa10.99□□□□□ -0.65
EBI3-202ENST00000599339 CTRB1P17538 263 aa10.99□□□□□ -0.65
EBI3-202ENST00000599339 HLA-GP17693 338 aa10.99□□□□□ -0.65
EBI3-202ENST00000599339 PSMB9P28065 219 aa10.99□□□□□ -0.65
EBI3-202ENST00000599339 EIF4EBP1Q13541 118 aaPredicted RBP10.99□□□□□ -0.65
EBI3-202ENST00000599339 UBE2UQ5VVX9 321 aa10.99□□□□□ -0.65
EBI3-202ENST00000599339 CTRB2Q6GPI1 263 aa10.99□□□□□ -0.65
EBI3-202ENST00000599339 SFXN4Q6P4A7 337 aa10.99□□□□□ -0.65
EBI3-202ENST00000599339 TMEM61Q8N0U2 210 aa10.99□□□□□ -0.65
EBI3-202ENST00000599339 ZBTB34Q8NCN2 500 aa10.99□□□□□ -0.65
EBI3-202ENST00000599339 OR52B4Q8NGK2 314 aa10.99□□□□□ -0.65
EBI3-202ENST00000599339 LGALS14Q8TCE9 139 aa10.99□□□□□ -0.65
EBI3-202ENST00000599339 SECTM1Q8WVN6 248 aa10.99□□□□□ -0.65
EBI3-202ENST00000599339 FCGR1BQ92637 280 aa10.99□□□□□ -0.65
EBI3-202ENST00000599339 CCDC140Q96MF4 163 aa10.99□□□□□ -0.65
EBI3-202ENST00000599339 HRASLSQ9HDD0 168 aa10.99□□□□□ -0.65
EBI3-202ENST00000599339 RHBDL2Q9NX52 303 aa10.99□□□□□ -0.65
EBI3-202ENST00000599339 SSR3Q9UNL2 185 aa10.99□□□□□ -0.65
EBI3-202ENST00000599339 DNAH1Q9P2D7 4330 aa10.98□□□□□ -0.65
EBI3-202ENST00000599339 TMEM213A2RRL7 107 aa10.98□□□□□ -0.65
EBI3-202ENST00000599339 E7EUB6 86 aa10.98□□□□□ -0.65
EBI3-202ENST00000599339 RBFOX2O43251 390 aaKnown RBP eCLIP10.98□□□□□ -0.65
EBI3-202ENST00000599339 SSX5O60225 188 aa10.98□□□□□ -0.65
EBI3-202ENST00000599339 FCGR2CP31995 323 aa10.98□□□□□ -0.65
EBI3-202ENST00000599339 SCAND1P57086 179 aa10.98□□□□□ -0.65
EBI3-202ENST00000599339 CATR1Q13166 79 aa10.98□□□□□ -0.65
EBI3-202ENST00000599339 KLK9Q2XQG4 91 aa10.98□□□□□ -0.65
EBI3-202ENST00000599339 TIMM50Q3ZCQ8 353 aa10.98□□□□□ -0.65
EBI3-202ENST00000599339 C19orf35Q6ZS72 473 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms