RNA–Protein interactions for RNA: ENST00000598558.5

SHKBP1-217, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-217ENST00000598558 MYOZ3Q8TDC0 251 aa11.08□□□□□ -0.64
SHKBP1-217ENST00000598558 ABHD5Q8WTS1 349 aa11.08□□□□□ -0.64
SHKBP1-217ENST00000598558 BORCS5Q969J3 196 aa11.08□□□□□ -0.64
SHKBP1-217ENST00000598558 OR2A7Q96R45 310 aa11.08□□□□□ -0.64
SHKBP1-217ENST00000598558 PLEKHA2Q9HB19 425 aa11.08□□□□□ -0.64
SHKBP1-217ENST00000598558 GPR132Q9UNW8 380 aa11.08□□□□□ -0.64
SHKBP1-217ENST00000598558 A0A1W2PN81 502 aa11.07□□□□□ -0.64
SHKBP1-217ENST00000598558 PLXNB1O43157 2135 aa11.07□□□□□ -0.64
SHKBP1-217ENST00000598558 KBTBD11O94819 623 aa11.07□□□□□ -0.64
SHKBP1-217ENST00000598558 HRASP01112 189 aa11.07□□□□□ -0.64
SHKBP1-217ENST00000598558 ELANEP08246 267 aa11.07□□□□□ -0.64
SHKBP1-217ENST00000598558 CHRNA7P36544 502 aa11.07□□□□□ -0.64
SHKBP1-217ENST00000598558 PIGPP57054 158 aa11.07□□□□□ -0.64
SHKBP1-217ENST00000598558 TAS2R31P59538 309 aa11.07□□□□□ -0.64
SHKBP1-217ENST00000598558 C2orf68Q2NKX9 166 aa11.07□□□□□ -0.64
SHKBP1-217ENST00000598558 ETV3LQ6ZN32 361 aa11.07□□□□□ -0.64
SHKBP1-217ENST00000598558 COMMD1Q8N668 190 aa11.07□□□□□ -0.64
SHKBP1-217ENST00000598558 OR5T1Q8NG75 326 aa11.07□□□□□ -0.64
SHKBP1-217ENST00000598558 R3HDM4Q96D70 268 aa11.07□□□□□ -0.64
SHKBP1-217ENST00000598558 TP53RKQ96S44 253 aa11.07□□□□□ -0.64
SHKBP1-217ENST00000598558 GON7Q9BXV9 100 aa11.07□□□□□ -0.64
SHKBP1-217ENST00000598558 C5orf66Q9H5L9 145 aa11.07□□□□□ -0.64
SHKBP1-217ENST00000598558 SLC2A8Q9NY64 477 aa11.07□□□□□ -0.64
SHKBP1-217ENST00000598558 PKD1L1Q8TDX9 2849 aa11.07□□□□□ -0.64
SHKBP1-217ENST00000598558 HMX3A6NHT5 357 aa11.06□□□□□ -0.64
SHKBP1-217ENST00000598558 TEX22C9J3V5 150 aa11.06□□□□□ -0.64
SHKBP1-217ENST00000598558 UPK2O00526 184 aa11.06□□□□□ -0.64
SHKBP1-217ENST00000598558 RBMXL2O75526 392 aaKnown RBP11.06□□□□□ -0.64
SHKBP1-217ENST00000598558 KRASP01116 189 aa11.06□□□□□ -0.64
SHKBP1-217ENST00000598558 OPN1MWP04001 364 aa11.06□□□□□ -0.64
SHKBP1-217ENST00000598558 CTSDP07339 412 aaPredicted RBP11.06□□□□□ -0.64
SHKBP1-217ENST00000598558 OPN1MW2P0DN77 364 aa11.06□□□□□ -0.64
SHKBP1-217ENST00000598558 OPN1MW3P0DN78 364 aa11.06□□□□□ -0.64
SHKBP1-217ENST00000598558 NQO2P16083 231 aa11.06□□□□□ -0.64
SHKBP1-217ENST00000598558 G6PCP35575 357 aa11.06□□□□□ -0.64
SHKBP1-217ENST00000598558 RAB9AP51151 201 aa11.06□□□□□ -0.64
SHKBP1-217ENST00000598558 SP6Q3SY56 376 aa11.06□□□□□ -0.64
SHKBP1-217ENST00000598558 KHDC1LQ5JSQ8 128 aa11.06□□□□□ -0.64
SHKBP1-217ENST00000598558 C19orf35Q6ZS72 473 aa11.06□□□□□ -0.64
SHKBP1-217ENST00000598558 C8orf86Q6ZUL3 223 aa11.06□□□□□ -0.64
SHKBP1-217ENST00000598558 MMD2Q8IY49 270 aa11.06□□□□□ -0.64
SHKBP1-217ENST00000598558 ADAD2Q8NCV1 583 aaKnown RBP11.06□□□□□ -0.64
SHKBP1-217ENST00000598558 CD300LFQ8TDQ1 290 aa11.06□□□□□ -0.64
SHKBP1-217ENST00000598558 SRSF12Q8WXF0 261 aaKnown RBP11.06□□□□□ -0.64
SHKBP1-217ENST00000598558 ZNF486Q96H40 463 aaPredicted RBP11.06□□□□□ -0.64
SHKBP1-217ENST00000598558 MS4A10Q96PG2 267 aa11.06□□□□□ -0.64
SHKBP1-217ENST00000598558 DUX3Q96PT4 197 aa11.06□□□□□ -0.64
SHKBP1-217ENST00000598558 GNB4Q9HAV0 340 aa11.06□□□□□ -0.64
SHKBP1-217ENST00000598558 AKIP1Q9NQ31 210 aa11.06□□□□□ -0.64
SHKBP1-217ENST00000598558 TMEM140Q9NV12 185 aa11.06□□□□□ -0.64
SHKBP1-217ENST00000598558 MCUBQ9NWR8 336 aa11.06□□□□□ -0.64
SHKBP1-217ENST00000598558 BET1LQ9NYM9 111 aa11.06□□□□□ -0.64
SHKBP1-217ENST00000598558 FOXA2Q9Y261 457 aaPredicted RBP11.06□□□□□ -0.64
SHKBP1-217ENST00000598558 VSIG4Q9Y279 399 aa11.06□□□□□ -0.64
SHKBP1-217ENST00000598558 OR9G9P0C7N8 305 aa11.05□□□□□ -0.64
SHKBP1-217ENST00000598558 PF4V1P10720 104 aa11.05□□□□□ -0.64
SHKBP1-217ENST00000598558 TMEM267Q0VDI3 215 aaPredicted RBP11.05□□□□□ -0.64
SHKBP1-217ENST00000598558 CXorf66Q5JRM2 361 aaPredicted RBP11.05□□□□□ -0.64
SHKBP1-217ENST00000598558 TOMM5Q8N4H5 51 aa11.05□□□□□ -0.64
SHKBP1-217ENST00000598558 ZNF491Q8N8L2 437 aa11.05□□□□□ -0.64
SHKBP1-217ENST00000598558 GDPD1Q8N9F7 314 aa11.05□□□□□ -0.64
SHKBP1-217ENST00000598558 POC5Q8NA72 575 aa11.05□□□□□ -0.64
SHKBP1-217ENST00000598558 ZFAND1Q8TCF1 268 aa11.05□□□□□ -0.64
SHKBP1-217ENST00000598558 TMEM230Q96A57 120 aa11.05□□□□□ -0.64
SHKBP1-217ENST00000598558 SEC22AQ96IW7 307 aa11.05□□□□□ -0.64
SHKBP1-217ENST00000598558 ZFP57Q9NU63 452 aa11.05□□□□□ -0.64
SHKBP1-217ENST00000598558 COMMD9Q9P000 198 aa11.05□□□□□ -0.64
SHKBP1-217ENST00000598558 NSG2Q9Y328 171 aa11.05□□□□□ -0.64
SHKBP1-217ENST00000598558 DBX1A6NMT0 343 aa11.04□□□□□ -0.64
SHKBP1-217ENST00000598558 MARCH11A6NNE9 402 aa11.04□□□□□ -0.64
SHKBP1-217ENST00000598558 CDX1P47902 265 aaPredicted RBP11.04□□□□□ -0.64
SHKBP1-217ENST00000598558 DEFA5Q01523 94 aa11.04□□□□□ -0.64
SHKBP1-217ENST00000598558 IZUMO4Q1ZYL8 232 aa11.04□□□□□ -0.64
SHKBP1-217ENST00000598558 DEFB136Q30KP8 78 aa11.04□□□□□ -0.64
SHKBP1-217ENST00000598558 TCTEX1D1Q8N7M0 179 aa11.04□□□□□ -0.64
SHKBP1-217ENST00000598558 VSTM2AQ8TAG5 236 aa11.04□□□□□ -0.64
SHKBP1-217ENST00000598558 RAX2Q96IS3 184 aa11.04□□□□□ -0.64
SHKBP1-217ENST00000598558 OR5B12Q96R08 314 aa11.04□□□□□ -0.64
SHKBP1-217ENST00000598558 PRRT1Q99946 306 aa11.04□□□□□ -0.64
SHKBP1-217ENST00000598558 TET2Q6N021 2002 aaPredicted RBP11.04□□□□□ -0.64
SHKBP1-217ENST00000598558 C3orf85A0A1B0GTC6 90 aa11.03□□□□□ -0.64
SHKBP1-217ENST00000598558 LINC00854A0A1B0GVQ3 168 aa11.03□□□□□ -0.64
SHKBP1-217ENST00000598558 H0Y980 276 aa11.03□□□□□ -0.64
SHKBP1-217ENST00000598558 IGKV1-5P01602 117 aa11.03□□□□□ -0.64
SHKBP1-217ENST00000598558 PRH1P02810 166 aa11.03□□□□□ -0.64
SHKBP1-217ENST00000598558 IL7P13232 177 aa11.03□□□□□ -0.64
SHKBP1-217ENST00000598558 HLA-GP17693 338 aa11.03□□□□□ -0.64
SHKBP1-217ENST00000598558 RPL27AP46776 148 aaKnown RBP11.03□□□□□ -0.64
SHKBP1-217ENST00000598558 RPL8P62917 257 aaKnown RBP11.03□□□□□ -0.64
SHKBP1-217ENST00000598558 SURF2Q15527 256 aaPredicted RBP11.03□□□□□ -0.64
SHKBP1-217ENST00000598558 ZNF57Q68EA5 555 aaPredicted RBP11.03□□□□□ -0.64
SHKBP1-217ENST00000598558 ZNF695Q8IW36 515 aa11.03□□□□□ -0.64
SHKBP1-217ENST00000598558 KLHL30-AS1Q8NEE0 82 aa11.03□□□□□ -0.64
SHKBP1-217ENST00000598558 DMBX1Q8NFW5 382 aa11.03□□□□□ -0.64
SHKBP1-217ENST00000598558 OR4A5Q8NH83 315 aa11.03□□□□□ -0.64
SHKBP1-217ENST00000598558 LHFPL5Q8TAF8 219 aa11.03□□□□□ -0.64
SHKBP1-217ENST00000598558 ALX4Q9H161 411 aaPredicted RBP11.03□□□□□ -0.64
SHKBP1-217ENST00000598558 FAM212BQ9NTI7 297 aaPredicted RBP11.03□□□□□ -0.64
SHKBP1-217ENST00000598558 COPZ2Q9P299 210 aa11.03□□□□□ -0.64
SHKBP1-217ENST00000598558 FBN3Q75N90 2809 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms