RNA–Protein interactions for RNA: ENST00000598553.1

VRK3-214, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 595 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-214ENST00000598553 GNG2P59768 71 aa8.14□□□□□ -1.11
VRK3-214ENST00000598553 ADAMTSL5Q6ZMM2 481 aa8.14□□□□□ -1.11
VRK3-214ENST00000598553 KCTD9Q7L273 389 aa8.14□□□□□ -1.11
VRK3-214ENST00000598553 ZBTB8BQ8NAP8 495 aaPredicted RBP8.14□□□□□ -1.11
VRK3-214ENST00000598553 CHAC2Q8WUX2 184 aa8.14□□□□□ -1.11
VRK3-214ENST00000598553 ACOT12Q8WYK0 555 aa8.14□□□□□ -1.11
VRK3-214ENST00000598553 FAM210AQ96ND0 272 aa8.14□□□□□ -1.11
VRK3-214ENST00000598553 TINAGL1Q9GZM7 467 aaPredicted RBP8.14□□□□□ -1.11
VRK3-214ENST00000598553 COA4Q9NYJ1 87 aa8.14□□□□□ -1.11
VRK3-214ENST00000598553 TAS2R8Q9NYW2 309 aa8.14□□□□□ -1.11
VRK3-214ENST00000598553 ANXA10Q9UJ72 324 aa8.14□□□□□ -1.11
VRK3-214ENST00000598553 SELENOKQ9Y6D0 94 aa8.14□□□□□ -1.11
VRK3-214ENST00000598553 S4R3C0 116 aa8.14□□□□□ -1.11
VRK3-214ENST00000598553 IZUMO1RA6ND01 250 aa8.13□□□□□ -1.11
VRK3-214ENST00000598553 TEX22C9J3V5 150 aa8.13□□□□□ -1.11
VRK3-214ENST00000598553 RGS5O15539 181 aa8.13□□□□□ -1.11
VRK3-214ENST00000598553 FRMD6-AS1P0C7T7 363 aa8.13□□□□□ -1.11
VRK3-214ENST00000598553 NHLRC4P0CG21 123 aaPredicted RBP8.13□□□□□ -1.11
VRK3-214ENST00000598553 PITPNAQ00169 270 aa8.13□□□□□ -1.11
VRK3-214ENST00000598553 ZNF343Q6P1L6 599 aa8.13□□□□□ -1.11
VRK3-214ENST00000598553 MZT2AQ6P582 158 aa8.13□□□□□ -1.11
VRK3-214ENST00000598553 CNIH2Q6PI25 160 aa8.13□□□□□ -1.11
VRK3-214ENST00000598553 Q8N1Y9 231 aa8.13□□□□□ -1.11
VRK3-214ENST00000598553 GDPD1Q8N9F7 314 aa8.13□□□□□ -1.11
VRK3-214ENST00000598553 TEX45Q8NA69 505 aa8.13□□□□□ -1.11
VRK3-214ENST00000598553 TMEM68Q96MH6 324 aa8.13□□□□□ -1.11
VRK3-214ENST00000598553 WWC2-AS2Q96NR7 200 aa8.13□□□□□ -1.11
VRK3-214ENST00000598553 RSRP1Q9BUV0 290 aa8.13□□□□□ -1.11
VRK3-214ENST00000598553 PAIP2BQ9ULR5 123 aaKnown RBP8.13□□□□□ -1.11
VRK3-214ENST00000598553 DMRT1Q9Y5R6 373 aa8.13□□□□□ -1.11
VRK3-214ENST00000598553 U3KQK5 164 aa8.13□□□□□ -1.11
VRK3-214ENST00000598553 TRAV3A0A0B4J244 114 aa8.12□□□□□ -1.11
VRK3-214ENST00000598553 C13orf42A0A1B0GVH6 325 aa8.12□□□□□ -1.11
VRK3-214ENST00000598553 BOLA2-SMG1P6H3BVE0 249 aa8.12□□□□□ -1.11
VRK3-214ENST00000598553 BMPR1BO00238 502 aa8.12□□□□□ -1.11
VRK3-214ENST00000598553 CTDSP2O14595 271 aa8.12□□□□□ -1.11
VRK3-214ENST00000598553 BRI3O95415 125 aa8.12□□□□□ -1.11
VRK3-214ENST00000598553 IGLV1-51P01701 117 aa8.12□□□□□ -1.11
VRK3-214ENST00000598553 IL6RP08887 468 aaPredicted RBP8.12□□□□□ -1.11
VRK3-214ENST00000598553 CTXN2P0C2S0 81 aa8.12□□□□□ -1.11
VRK3-214ENST00000598553 FCGR2CP31995 323 aa8.12□□□□□ -1.11
VRK3-214ENST00000598553 SCAND1P57086 179 aa8.12□□□□□ -1.11
VRK3-214ENST00000598553 SYNJ2BPP57105 145 aa8.12□□□□□ -1.11
VRK3-214ENST00000598553 KLF5Q13887 457 aaPredicted RBP8.12□□□□□ -1.11
VRK3-214ENST00000598553 CDK10Q15131 360 aa8.12□□□□□ -1.11
VRK3-214ENST00000598553 VMA21Q3ZAQ7 101 aa8.12□□□□□ -1.11
VRK3-214ENST00000598553 SSX9Q7RTT3 188 aa8.12□□□□□ -1.11
VRK3-214ENST00000598553 PUSL1Q8N0Z8 303 aaKnown RBP8.12□□□□□ -1.11
VRK3-214ENST00000598553 CADM3Q8N126 398 aa8.12□□□□□ -1.11
VRK3-214ENST00000598553 BEST4Q8NFU0 473 aa8.12□□□□□ -1.11
VRK3-214ENST00000598553 OSR1Q8TAX0 266 aaPredicted RBP8.12□□□□□ -1.11
VRK3-214ENST00000598553 SECTM1Q8WVN6 248 aa8.12□□□□□ -1.11
VRK3-214ENST00000598553 TCTEX1D2Q8WW35 142 aa8.12□□□□□ -1.11
VRK3-214ENST00000598553 PHB2Q99623 299 aa8.12□□□□□ -1.11
VRK3-214ENST00000598553 AUNIPQ9H7T9 357 aa8.12□□□□□ -1.11
VRK3-214ENST00000598553 ETV7Q9Y603 341 aa8.12□□□□□ -1.11
VRK3-214ENST00000598553 SMAD5-AS1Q9Y6J3 95 aa8.12□□□□□ -1.11
VRK3-214ENST00000598553 A0A0G2JLM5 398 aa8.11□□□□□ -1.11
VRK3-214ENST00000598553 OR2J3O76001 311 aa8.11□□□□□ -1.11
VRK3-214ENST00000598553 SLC22A5O76082 557 aa8.11□□□□□ -1.11
VRK3-214ENST00000598553 PPYP01298 95 aa8.11□□□□□ -1.11
VRK3-214ENST00000598553 IGHV3-23P01764 117 aa8.11□□□□□ -1.11
VRK3-214ENST00000598553 HLA-AP01891 365 aaKnown RBP8.11□□□□□ -1.11
VRK3-214ENST00000598553 CSN3P07498 182 aa8.11□□□□□ -1.11
VRK3-214ENST00000598553 OR9G9P0C7N8 305 aa8.11□□□□□ -1.11
VRK3-214ENST00000598553 AREGP15514 252 aa8.11□□□□□ -1.11
VRK3-214ENST00000598553 EIF2B2P49770 351 aaKnown RBP8.11□□□□□ -1.11
VRK3-214ENST00000598553 FXYD4P59646 89 aa8.11□□□□□ -1.11
VRK3-214ENST00000598553 RHOGP84095 191 aa8.11□□□□□ -1.11
VRK3-214ENST00000598553 AKAP14Q86UN6 197 aa8.11□□□□□ -1.11
VRK3-214ENST00000598553 HOGA1Q86XE5 327 aa8.11□□□□□ -1.11
VRK3-214ENST00000598553 SNX29P2Q8IUI4 249 aa8.11□□□□□ -1.11
VRK3-214ENST00000598553 THAP7Q9BT49 309 aaPredicted RBP8.11□□□□□ -1.11
VRK3-214ENST00000598553 RANGRFQ9HD47 186 aaPredicted RBP8.11□□□□□ -1.11
VRK3-214ENST00000598553 GAR1Q9NY12 217 aaKnown RBP8.11□□□□□ -1.11
VRK3-214ENST00000598553 STAB2Q8WWQ8 2551 aa8.11□□□□□ -1.11
VRK3-214ENST00000598553 A0A0A6YYH2 397 aa8.1□□□□□ -1.11
VRK3-214ENST00000598553 TRBV9A0A0B4J1U6 114 aa8.1□□□□□ -1.11
VRK3-214ENST00000598553 FABP12A6NFH5 140 aa8.1□□□□□ -1.11
VRK3-214ENST00000598553 A6NJ64 397 aa8.1□□□□□ -1.11
VRK3-214ENST00000598553 PPP5D1E7EU14 171 aa8.1□□□□□ -1.11
VRK3-214ENST00000598553 CREBL2O60519 120 aaPredicted RBP8.1□□□□□ -1.11
VRK3-214ENST00000598553 KBTBD11O94819 623 aa8.1□□□□□ -1.11
VRK3-214ENST00000598553 REG1AP05451 166 aa8.1□□□□□ -1.11
VRK3-214ENST00000598553 EIF4EP06730 217 aaKnown RBP8.1□□□□□ -1.11
VRK3-214ENST00000598553 RPA2P15927 270 aa8.1□□□□□ -1.11
VRK3-214ENST00000598553 ZP3P21754 424 aa8.1□□□□□ -1.11
VRK3-214ENST00000598553 EXOSC2Q13868 293 aaKnown RBP8.1□□□□□ -1.11
VRK3-214ENST00000598553 ZNF818PQ6ZRF7 136 aa8.1□□□□□ -1.11
VRK3-214ENST00000598553 OR9G4Q8NGQ1 327 aa8.1□□□□□ -1.11
VRK3-214ENST00000598553 CCDC140Q96MF4 163 aa8.1□□□□□ -1.11
VRK3-214ENST00000598553 FANCD2OSQ96PS1 177 aa8.1□□□□□ -1.11
VRK3-214ENST00000598553 FYTTD1Q96QD9 318 aaKnown RBP8.1□□□□□ -1.11
VRK3-214ENST00000598553 OR4C12Q96R67 309 aa8.1□□□□□ -1.11
VRK3-214ENST00000598553 HSD17B10Q99714 261 aaKnown RBP8.1□□□□□ -1.11
VRK3-214ENST00000598553 ELOVL1Q9BW60 279 aa8.1□□□□□ -1.11
VRK3-214ENST00000598553 SRRQ9GZT4 340 aa8.1□□□□□ -1.11
VRK3-214ENST00000598553 FXYD6Q9H0Q3 95 aa8.1□□□□□ -1.11
VRK3-214ENST00000598553 PEF1Q9UBV8 284 aaKnown RBP8.1□□□□□ -1.11
VRK3-214ENST00000598553 MRPS7Q9Y2R9 242 aaKnown RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms