RNA–Protein interactions for RNA: ENST00000596436.5

USHBP1-206, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 487 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-206ENST00000596436 GON7Q9BXV9 100 aa12.37□□□□□ -0.43
USHBP1-206ENST00000596436 NUBP2Q9Y5Y2 271 aa12.37□□□□□ -0.43
USHBP1-206ENST00000596436 GPR31O00270 319 aa12.36□□□□□ -0.43
USHBP1-206ENST00000596436 RAB3DO95716 219 aa12.36□□□□□ -0.43
USHBP1-206ENST00000596436 IGLV1-40P01703 118 aa12.36□□□□□ -0.43
USHBP1-206ENST00000596436 ZNF735P0CB33 412 aa12.36□□□□□ -0.43
USHBP1-206ENST00000596436 PSMB8P28062 276 aa12.36□□□□□ -0.43
USHBP1-206ENST00000596436 KIR2DS2P43631 304 aa12.36□□□□□ -0.43
USHBP1-206ENST00000596436 CATR1Q13166 79 aa12.36□□□□□ -0.43
USHBP1-206ENST00000596436 FOXE3Q13461 319 aa12.36□□□□□ -0.43
USHBP1-206ENST00000596436 FHL3Q13643 280 aa12.36□□□□□ -0.43
USHBP1-206ENST00000596436 FXYD3Q14802 87 aa12.36□□□□□ -0.43
USHBP1-206ENST00000596436 ZNF79Q15937 498 aa12.36□□□□□ -0.43
USHBP1-206ENST00000596436 PRSS8Q16651 343 aa12.36□□□□□ -0.43
USHBP1-206ENST00000596436 PHLDA2Q53GA4 152 aa12.36□□□□□ -0.43
USHBP1-206ENST00000596436 C9orf66Q5T8R8 295 aa12.36□□□□□ -0.43
USHBP1-206ENST00000596436 ARRDC1Q8N5I2 433 aa12.36□□□□□ -0.43
USHBP1-206ENST00000596436 OR5M8Q8NGP6 311 aa12.36□□□□□ -0.43
USHBP1-206ENST00000596436 GRPEL2Q8TAA5 225 aa12.36□□□□□ -0.43
USHBP1-206ENST00000596436 MRGPRFQ96AM1 343 aa12.36□□□□□ -0.43
USHBP1-206ENST00000596436 NDUFA13Q9P0J0 144 aa12.36□□□□□ -0.43
USHBP1-206ENST00000596436 A0A1W2PN81 502 aa12.35□□□□□ -0.43
USHBP1-206ENST00000596436 RBFOX2O43251 390 aaKnown RBP eCLIP12.35□□□□□ -0.43
USHBP1-206ENST00000596436 IFNA6P05013 189 aa12.35□□□□□ -0.43
USHBP1-206ENST00000596436 ELANEP08246 267 aa12.35□□□□□ -0.43
USHBP1-206ENST00000596436 CHRNA7P36544 502 aa12.35□□□□□ -0.43
USHBP1-206ENST00000596436 UCP3P55916 312 aa12.35□□□□□ -0.43
USHBP1-206ENST00000596436 DEFB136Q30KP8 78 aa12.35□□□□□ -0.43
USHBP1-206ENST00000596436 PUSL1Q8N0Z8 303 aaKnown RBP12.35□□□□□ -0.43
USHBP1-206ENST00000596436 LFNGQ8NES3 379 aa12.35□□□□□ -0.43
USHBP1-206ENST00000596436 OR4C16Q8NGL9 310 aa12.35□□□□□ -0.43
USHBP1-206ENST00000596436 BORCS5Q969J3 196 aa12.35□□□□□ -0.43
USHBP1-206ENST00000596436 PRR25Q96S07 402 aa12.35□□□□□ -0.43
USHBP1-206ENST00000596436 KLK15Q9H2R5 256 aa12.35□□□□□ -0.43
USHBP1-206ENST00000596436 ZNF430Q9H8G1 570 aaPredicted RBP12.35□□□□□ -0.43
USHBP1-206ENST00000596436 EPPK1P58107 5090 aaKnown RBP12.35□□□□□ -0.43
USHBP1-206ENST00000596436 TENM2Q9NT68 2774 aa12.34□□□□□ -0.43
USHBP1-206ENST00000596436 ANKRD20A5PA0PJZ0 165 aa12.34□□□□□ -0.43
USHBP1-206ENST00000596436 KBTBD11O94819 623 aa12.34□□□□□ -0.43
USHBP1-206ENST00000596436 S1PR2O95136 353 aa12.34□□□□□ -0.43
USHBP1-206ENST00000596436 PI3P19957 117 aa12.34□□□□□ -0.43
USHBP1-206ENST00000596436 S100A5P33763 92 aa12.34□□□□□ -0.43
USHBP1-206ENST00000596436 PPP5CP53041 499 aa12.34□□□□□ -0.43
USHBP1-206ENST00000596436 CXorf66Q5JRM2 361 aaPredicted RBP12.34□□□□□ -0.43
USHBP1-206ENST00000596436 C10orf55Q5SWW7 151 aa12.34□□□□□ -0.43
USHBP1-206ENST00000596436 ASPHD1Q5U4P2 390 aa12.34□□□□□ -0.43
USHBP1-206ENST00000596436 UNQ5815/PRO19632Q6UWF5 114 aa12.34□□□□□ -0.43
USHBP1-206ENST00000596436 SSX9Q7RTT3 188 aa12.34□□□□□ -0.43
USHBP1-206ENST00000596436 SLC38A6Q8IZM9 456 aa12.34□□□□□ -0.43
USHBP1-206ENST00000596436 OR6Q1Q8NGQ2 317 aa12.34□□□□□ -0.43
USHBP1-206ENST00000596436 TMEM167AQ8TBQ9 72 aa12.34□□□□□ -0.43
USHBP1-206ENST00000596436 MYOZ3Q8TDC0 251 aa12.34□□□□□ -0.43
USHBP1-206ENST00000596436 CASTOR1Q8WTX7 329 aa12.34□□□□□ -0.43
USHBP1-206ENST00000596436 TRIM63Q969Q1 353 aa12.34□□□□□ -0.43
USHBP1-206ENST00000596436 RHOVQ96L33 236 aa12.34□□□□□ -0.43
USHBP1-206ENST00000596436 FOXA2Q9Y261 457 aaPredicted RBP12.34□□□□□ -0.43
USHBP1-206ENST00000596436 CSMD3Q7Z407 3707 aa12.34□□□□□ -0.43
USHBP1-206ENST00000596436 DNAH1Q9P2D7 4330 aa12.33□□□□□ -0.43
USHBP1-206ENST00000596436 OR2A4O95047 310 aa12.33□□□□□ -0.44
USHBP1-206ENST00000596436 CNIH1O95406 144 aa12.33□□□□□ -0.44
USHBP1-206ENST00000596436 KIAA0141Q14154 515 aaPredicted RBP12.33□□□□□ -0.44
USHBP1-206ENST00000596436 TNXAQ16473 311 aa12.33□□□□□ -0.44
USHBP1-206ENST00000596436 SCGB2B2Q4G0G5 96 aa12.33□□□□□ -0.44
USHBP1-206ENST00000596436 ZNF585BQ52M93 769 aa12.33□□□□□ -0.44
USHBP1-206ENST00000596436 LPCAT3Q6P1A2 487 aa12.33□□□□□ -0.44
USHBP1-206ENST00000596436 TBC1D26Q86UD7 250 aa12.33□□□□□ -0.44
USHBP1-206ENST00000596436 CMTM1Q8IZ96 169 aa12.33□□□□□ -0.44
USHBP1-206ENST00000596436 OR2A7Q96R45 310 aa12.33□□□□□ -0.44
USHBP1-206ENST00000596436 SLC2A9Q9NRM0 540 aa12.33□□□□□ -0.44
USHBP1-206ENST00000596436 SEC14L6B5MCN3 397 aa12.32□□□□□ -0.44
USHBP1-206ENST00000596436 HPRT1P00492 218 aa12.32□□□□□ -0.44
USHBP1-206ENST00000596436 HRASP01112 189 aa12.32□□□□□ -0.44
USHBP1-206ENST00000596436 AKAIN1P0CW23 69 aa12.32□□□□□ -0.44
USHBP1-206ENST00000596436 MYOD1P15172 320 aa12.32□□□□□ -0.44
USHBP1-206ENST00000596436 PGAM2P15259 253 aa12.32□□□□□ -0.44
USHBP1-206ENST00000596436 F2RP25116 425 aa12.32□□□□□ -0.44
USHBP1-206ENST00000596436 RAB25P57735 213 aa12.32□□□□□ -0.44
USHBP1-206ENST00000596436 TAS2R31P59538 309 aa12.32□□□□□ -0.44
USHBP1-206ENST00000596436 MEF2DQ14814 521 aa12.32□□□□□ -0.44
USHBP1-206ENST00000596436 POU2AF1Q16633 256 aa12.32□□□□□ -0.44
USHBP1-206ENST00000596436 AKIRIN2Q53H80 203 aa12.32□□□□□ -0.44
USHBP1-206ENST00000596436 PYDC2Q56P42 97 aa12.32□□□□□ -0.44
USHBP1-206ENST00000596436 OR4A47Q6IF82 309 aa12.32□□□□□ -0.44
USHBP1-206ENST00000596436 TCTEX1D1Q8N7M0 179 aa12.32□□□□□ -0.44
USHBP1-206ENST00000596436 TERB2Q8NHR7 220 aa12.32□□□□□ -0.44
USHBP1-206ENST00000596436 C4orf3Q8WVX3 66 aa12.32□□□□□ -0.44
USHBP1-206ENST00000596436 SRSF12Q8WXF0 261 aaKnown RBP12.32□□□□□ -0.44
USHBP1-206ENST00000596436 THAP7Q9BT49 309 aaPredicted RBP12.32□□□□□ -0.44
USHBP1-206ENST00000596436 PLEKHA2Q9HB19 425 aa12.32□□□□□ -0.44
USHBP1-206ENST00000596436 TRAV3A0A0B4J244 114 aa12.31□□□□□ -0.44
USHBP1-206ENST00000596436 APELAP0DMC3 54 aa12.31□□□□□ -0.44
USHBP1-206ENST00000596436 RPA2P15927 270 aa12.31□□□□□ -0.44
USHBP1-206ENST00000596436 ETV6P41212 452 aa12.31□□□□□ -0.44
USHBP1-206ENST00000596436 ECI1P42126 302 aa12.31□□□□□ -0.44
USHBP1-206ENST00000596436 LPAR6P43657 344 aa12.31□□□□□ -0.44
USHBP1-206ENST00000596436 TMEM267Q0VDI3 215 aaPredicted RBP12.31□□□□□ -0.44
USHBP1-206ENST00000596436 MMD2Q8IY49 270 aa12.31□□□□□ -0.44
USHBP1-206ENST00000596436 Q8N402 240 aa12.31□□□□□ -0.44
USHBP1-206ENST00000596436 POC5Q8NA72 575 aa12.31□□□□□ -0.44
USHBP1-206ENST00000596436 OR13C8Q8NGS7 320 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms