RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 WDR25Q64LD2 544 aaPredicted RBP18.66■□□□□ 0.58
SRRM1-222ENST00000596378 FAM216AQ8WUB2 273 aa18.66■□□□□ 0.58
SRRM1-222ENST00000596378 NCOR1P1Q9H4R4 102 aa18.66■□□□□ 0.58
SRRM1-222ENST00000596378 TCF19Q9Y242 345 aa18.66■□□□□ 0.58
SRRM1-222ENST00000596378 NDUFB7P17568 137 aa18.65■□□□□ 0.58
SRRM1-222ENST00000596378 RHOVQ96L33 236 aa18.65■□□□□ 0.58
SRRM1-222ENST00000596378 SSX3Q99909 188 aa18.65■□□□□ 0.58
SRRM1-222ENST00000596378 IDI2-AS1Q9NZ38 188 aa18.65■□□□□ 0.58
SRRM1-222ENST00000596378 PKDREJQ9NTG1 2253 aa18.65■□□□□ 0.58
SRRM1-222ENST00000596378 TRAV38-1A0A0B4J264 116 aa18.65■□□□□ 0.58
SRRM1-222ENST00000596378 C17orf112F2Z3M2 114 aa18.65■□□□□ 0.58
SRRM1-222ENST00000596378 UBE2CO00762 179 aa18.65■□□□□ 0.58
SRRM1-222ENST00000596378 KIR2DS2P43631 304 aa18.65■□□□□ 0.58
SRRM1-222ENST00000596378 OR4A47Q6IF82 309 aa18.65■□□□□ 0.58
SRRM1-222ENST00000596378 RPUSD4Q96CM3 377 aaKnown RBP18.65■□□□□ 0.58
SRRM1-222ENST00000596378 ITGB1BP1O14713 200 aa18.64■□□□□ 0.57
SRRM1-222ENST00000596378 OR52E5Q8NH55 327 aa18.64■□□□□ 0.57
SRRM1-222ENST00000596378 SIRT7Q9NRC8 400 aa18.64■□□□□ 0.57
SRRM1-222ENST00000596378 IGHV2-5P01817 119 aa18.63■□□□□ 0.57
SRRM1-222ENST00000596378 PSMB3P49720 205 aa18.63■□□□□ 0.57
SRRM1-222ENST00000596378 ZCCHC14Q8WYQ9 949 aaKnown RBP18.63■□□□□ 0.57
SRRM1-222ENST00000596378 SMIM7Q9BQ49 75 aa18.63■□□□□ 0.57
SRRM1-222ENST00000596378 GAB2Q9UQC2 676 aa18.63■□□□□ 0.57
SRRM1-222ENST00000596378 C15orf61A6NNL5 157 aa18.63■□□□□ 0.57
SRRM1-222ENST00000596378 PRSS46E5RG02 174 aa18.63■□□□□ 0.57
SRRM1-222ENST00000596378 TEX36Q5VZQ5 186 aa18.63■□□□□ 0.57
SRRM1-222ENST00000596378 TREML4Q6UXN2 200 aa18.63■□□□□ 0.57
SRRM1-222ENST00000596378 SPACA3Q8IXA5 215 aa18.63■□□□□ 0.57
SRRM1-222ENST00000596378 OR4F5Q8NH21 305 aa18.63■□□□□ 0.57
SRRM1-222ENST00000596378 OR4F4Q96R69 305 aa18.63■□□□□ 0.57
SRRM1-222ENST00000596378 MS4A5Q9H3V2 200 aa18.63■□□□□ 0.57
SRRM1-222ENST00000596378 C17orf100A8MU93 164 aa18.62■□□□□ 0.57
SRRM1-222ENST00000596378 B4DEV8 164 aa18.62■□□□□ 0.57
SRRM1-222ENST00000596378 CDC34P49427 236 aaPredicted RBP18.62■□□□□ 0.57
SRRM1-222ENST00000596378 THBS3P49746 956 aa18.62■□□□□ 0.57
SRRM1-222ENST00000596378 MEOX2P50222 304 aa18.62■□□□□ 0.57
SRRM1-222ENST00000596378 PNRC1Q12796 327 aaPredicted RBP18.62■□□□□ 0.57
SRRM1-222ENST00000596378 PMS2P11Q13670 270 aa18.62■□□□□ 0.57
SRRM1-222ENST00000596378 ZNF729A6NN14 1252 aaPredicted RBP18.62■□□□□ 0.57
SRRM1-222ENST00000596378 CYB5BO43169 146 aa18.62■□□□□ 0.57
SRRM1-222ENST00000596378 PAGE4O60829 102 aa18.62■□□□□ 0.57
SRRM1-222ENST00000596378 C1QL4Q86Z23 238 aa18.62■□□□□ 0.57
SRRM1-222ENST00000596378 PATZ1Q9HBE1 687 aaKnown RBP18.62■□□□□ 0.57
SRRM1-222ENST00000596378 RAB9BQ9NP90 201 aa18.62■□□□□ 0.57
SRRM1-222ENST00000596378 ELOVL5Q9NYP7 299 aa18.62■□□□□ 0.57
SRRM1-222ENST00000596378 CXorf65A6NEN9 183 aa18.61■□□□□ 0.57
SRRM1-222ENST00000596378 FCN3O75636 299 aa18.61■□□□□ 0.57
SRRM1-222ENST00000596378 RPP30P78346 268 aaKnown RBP18.61■□□□□ 0.57
SRRM1-222ENST00000596378 ADIRFQ15847 76 aa18.61■□□□□ 0.57
SRRM1-222ENST00000596378 ACOT6Q3I5F7 207 aaPredicted RBP18.61■□□□□ 0.57
SRRM1-222ENST00000596378 PDLIM3Q53GG5 364 aaPredicted RBP18.61■□□□□ 0.57
SRRM1-222ENST00000596378 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.61■□□□□ 0.57
SRRM1-222ENST00000596378 LRFN3Q9BTN0 628 aa18.61■□□□□ 0.57
SRRM1-222ENST00000596378 MGST2Q99735 147 aa18.61■□□□□ 0.57
SRRM1-222ENST00000596378 HINT2Q9BX68 163 aa18.61■□□□□ 0.57
SRRM1-222ENST00000596378 RPUSD1Q9UJJ7 312 aaKnown RBP18.61■□□□□ 0.57
SRRM1-222ENST00000596378 IGKV1-16P04430 117 aa18.6■□□□□ 0.57
SRRM1-222ENST00000596378 TBR1Q16650 682 aa18.6■□□□□ 0.57
SRRM1-222ENST00000596378 RND1Q92730 232 aa18.6■□□□□ 0.57
SRRM1-222ENST00000596378 METTL1Q9UBP6 276 aaKnown RBP18.6■□□□□ 0.57
SRRM1-222ENST00000596378 YIF1AO95070 293 aa18.6■□□□□ 0.57
SRRM1-222ENST00000596378 OPN1MWP04001 364 aa18.6■□□□□ 0.57
SRRM1-222ENST00000596378 OPN1MW2P0DN77 364 aa18.6■□□□□ 0.57
SRRM1-222ENST00000596378 OPN1MW3P0DN78 364 aa18.6■□□□□ 0.57
SRRM1-222ENST00000596378 CCL3L1P16619 93 aa18.6■□□□□ 0.57
SRRM1-222ENST00000596378 TNFRSF1AP19438 455 aa18.6■□□□□ 0.57
SRRM1-222ENST00000596378 COL8A2P25067 703 aa18.6■□□□□ 0.57
SRRM1-222ENST00000596378 KIAA0141Q14154 515 aaPredicted RBP18.6■□□□□ 0.57
SRRM1-222ENST00000596378 NCMAPQ5T1S8 102 aa18.6■□□□□ 0.57
SRRM1-222ENST00000596378 PARLQ9H300 379 aa18.6■□□□□ 0.57
SRRM1-222ENST00000596378 SLC25A10Q9UBX3 287 aaPredicted RBP18.6■□□□□ 0.57
SRRM1-222ENST00000596378 TNCP24821 2201 aa18.59■□□□□ 0.57
SRRM1-222ENST00000596378 AP4M1O00189 453 aa18.59■□□□□ 0.57
SRRM1-222ENST00000596378 CT45A6P0DMU7 189 aa18.59■□□□□ 0.57
SRRM1-222ENST00000596378 CT45A5P0DMU8 189 aa18.59■□□□□ 0.57
SRRM1-222ENST00000596378 CT45A7P0DMV0 189 aa18.59■□□□□ 0.57
SRRM1-222ENST00000596378 MIC13Q5XKP0 118 aa18.59■□□□□ 0.57
SRRM1-222ENST00000596378 CORO2AQ92828 525 aa18.59■□□□□ 0.57
SRRM1-222ENST00000596378 C1orf159Q96HA4 380 aa18.59■□□□□ 0.57
SRRM1-222ENST00000596378 DIRC2Q96SL1 478 aa18.59■□□□□ 0.57
SRRM1-222ENST00000596378 MANBALQ9NQG1 85 aa18.59■□□□□ 0.57
SRRM1-222ENST00000596378 TMEM14BQ9NUH8 114 aa18.59■□□□□ 0.57
SRRM1-222ENST00000596378 JKAMPQ9P055 326 aa18.59■□□□□ 0.57
SRRM1-222ENST00000596378 NAT8Q9UHE5 227 aa18.59■□□□□ 0.57
SRRM1-222ENST00000596378 KBTBD11O94819 623 aa18.58■□□□□ 0.57
SRRM1-222ENST00000596378 SLC25A48Q6ZT89 311 aaKnown RBP18.58■□□□□ 0.57
SRRM1-222ENST00000596378 LINC00574Q9H8X3 128 aa18.58■□□□□ 0.57
SRRM1-222ENST00000596378 SAP30LQ9HAJ7 183 aa18.58■□□□□ 0.57
SRRM1-222ENST00000596378 FOXA2Q9Y261 457 aaPredicted RBP18.58■□□□□ 0.57
SRRM1-222ENST00000596378 RELNP78509 3460 aa18.58■□□□□ 0.57
SRRM1-222ENST00000596378 TLN1Q9Y490 2541 aaKnown RBP18.58■□□□□ 0.56
SRRM1-222ENST00000596378 TRGV8A0A0C4DH27 118 aa18.58■□□□□ 0.56
SRRM1-222ENST00000596378 hADV38S2A0JD32 116 aa18.58■□□□□ 0.56
SRRM1-222ENST00000596378 NKX6-3A6NJ46 265 aa18.58■□□□□ 0.56
SRRM1-222ENST00000596378 CLDN34H7C241 214 aa18.58■□□□□ 0.56
SRRM1-222ENST00000596378 UBE2G2P60604 165 aa18.58■□□□□ 0.56
SRRM1-222ENST00000596378 CYP2G1PQ6ZSU1 146 aa18.58■□□□□ 0.56
SRRM1-222ENST00000596378 SLC16A13Q7RTY0 426 aa18.58■□□□□ 0.56
SRRM1-222ENST00000596378 SSMEM1Q8WWF3 244 aa18.58■□□□□ 0.56
SRRM1-222ENST00000596378 CCL17Q92583 94 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms