RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 IL18Q14116 193 aa8.64□□□□□ -1.03
VRK3-210ENST00000596121 PHLDA2Q53GA4 152 aa8.64□□□□□ -1.03
VRK3-210ENST00000596121 OR4A47Q6IF82 309 aa8.64□□□□□ -1.03
VRK3-210ENST00000596121 PYHIN1Q6K0P9 492 aa8.64□□□□□ -1.03
VRK3-210ENST00000596121 FAAP20Q6NZ36 180 aa8.64□□□□□ -1.03
VRK3-210ENST00000596121 TMEM65Q6PI78 240 aa8.64□□□□□ -1.03
VRK3-210ENST00000596121 C19orf35Q6ZS72 473 aa8.64□□□□□ -1.03
VRK3-210ENST00000596121 TCTEX1D1Q8N7M0 179 aa8.64□□□□□ -1.03
VRK3-210ENST00000596121 TMEM167AQ8TBQ9 72 aa8.64□□□□□ -1.03
VRK3-210ENST00000596121 SRSF12Q8WXF0 261 aaKnown RBP8.64□□□□□ -1.03
VRK3-210ENST00000596121 RHOVQ96L33 236 aa8.64□□□□□ -1.03
VRK3-210ENST00000596121 OR2A7Q96R45 310 aa8.64□□□□□ -1.03
VRK3-210ENST00000596121 HMX3A6NHT5 357 aa8.63□□□□□ -1.03
VRK3-210ENST00000596121 KBTBD11O94819 623 aa8.63□□□□□ -1.03
VRK3-210ENST00000596121 IGHV3-11P01762 117 aa8.63□□□□□ -1.03
VRK3-210ENST00000596121 PRH1P02810 166 aa8.63□□□□□ -1.03
VRK3-210ENST00000596121 PI3P19957 117 aa8.63□□□□□ -1.03
VRK3-210ENST00000596121 CD33P20138 364 aa8.63□□□□□ -1.03
VRK3-210ENST00000596121 SLC6A1P30531 599 aa8.63□□□□□ -1.03
VRK3-210ENST00000596121 LPAR6P43657 344 aa8.63□□□□□ -1.03
VRK3-210ENST00000596121 UCP3P55916 312 aa8.63□□□□□ -1.03
VRK3-210ENST00000596121 RUNX1Q01196 453 aa8.63□□□□□ -1.03
VRK3-210ENST00000596121 CATR1Q13166 79 aa8.63□□□□□ -1.03
VRK3-210ENST00000596121 POU2AF1Q16633 256 aa8.63□□□□□ -1.03
VRK3-210ENST00000596121 RNASE10Q5GAN6 216 aaKnown RBP8.63□□□□□ -1.03
VRK3-210ENST00000596121 STEAP1BQ6NZ63 245 aa8.63□□□□□ -1.03
VRK3-210ENST00000596121 MMD2Q8IY49 270 aa8.63□□□□□ -1.03
VRK3-210ENST00000596121 POC5Q8NA72 575 aa8.63□□□□□ -1.03
VRK3-210ENST00000596121 ADAD2Q8NCV1 583 aaKnown RBP8.63□□□□□ -1.03
VRK3-210ENST00000596121 OR5M8Q8NGP6 311 aa8.63□□□□□ -1.03
VRK3-210ENST00000596121 C15orf40Q8WUR7 153 aa8.63□□□□□ -1.03
VRK3-210ENST00000596121 DGCR14Q96DF8 476 aaKnown RBP8.63□□□□□ -1.03
VRK3-210ENST00000596121 VSIG4Q9Y279 399 aa8.63□□□□□ -1.03
VRK3-210ENST00000596121 V9GYH0 126 aa8.63□□□□□ -1.03
VRK3-210ENST00000596121 FABP12A6NFH5 140 aa8.62□□□□□ -1.03
VRK3-210ENST00000596121 ZNF701M0R085 212 aaPredicted RBP8.62□□□□□ -1.03
VRK3-210ENST00000596121 UPK2O00526 184 aa8.62□□□□□ -1.03
VRK3-210ENST00000596121 GSTZ1O43708 216 aaPredicted RBP8.62□□□□□ -1.03
VRK3-210ENST00000596121 RAB3DO95716 219 aa8.62□□□□□ -1.03
VRK3-210ENST00000596121 HPRT1P00492 218 aa8.62□□□□□ -1.03
VRK3-210ENST00000596121 HRASP01112 189 aa8.62□□□□□ -1.03
VRK3-210ENST00000596121 IGKV1-39P01597 117 aa8.62□□□□□ -1.03
VRK3-210ENST00000596121 IGKV1D-39P04432 117 aa8.62□□□□□ -1.03
VRK3-210ENST00000596121 F2RP25116 425 aa8.62□□□□□ -1.03
VRK3-210ENST00000596121 TPPP2P59282 170 aa8.62□□□□□ -1.03
VRK3-210ENST00000596121 TAS2R31P59538 309 aa8.62□□□□□ -1.03
VRK3-210ENST00000596121 TAS2R19P59542 299 aa8.62□□□□□ -1.03
VRK3-210ENST00000596121 MRPS10P82664 201 aaKnown RBP8.62□□□□□ -1.03
VRK3-210ENST00000596121 ZNF45Q02386 682 aa8.62□□□□□ -1.03
VRK3-210ENST00000596121 TBC1D26Q86UD7 250 aa8.62□□□□□ -1.03
VRK3-210ENST00000596121 SLC38A6Q8IZM9 456 aa8.62□□□□□ -1.03
VRK3-210ENST00000596121 ARRDC1Q8N5I2 433 aa8.62□□□□□ -1.03
VRK3-210ENST00000596121 OR11H1Q8NG94 326 aa8.62□□□□□ -1.03
VRK3-210ENST00000596121 OR1N2Q8NGR9 330 aa8.62□□□□□ -1.03
VRK3-210ENST00000596121 PLEKHA2Q9HB19 425 aa8.62□□□□□ -1.03
VRK3-210ENST00000596121 BET1LQ9NYM9 111 aa8.62□□□□□ -1.03
VRK3-210ENST00000596121 IGHV4OR15-8A0A075B7B6 117 aa8.61□□□□□ -1.03
VRK3-210ENST00000596121 A0A087WW49 117 aa8.61□□□□□ -1.03
VRK3-210ENST00000596121 ANKRD20A5PA0PJZ0 165 aa8.61□□□□□ -1.03
VRK3-210ENST00000596121 DPPA5A6NC42 116 aa8.61□□□□□ -1.03
VRK3-210ENST00000596121 BRI3O95415 125 aa8.61□□□□□ -1.03
VRK3-210ENST00000596121 TRGV3P03979 118 aa8.61□□□□□ -1.03
VRK3-210ENST00000596121 IFNA6P05013 189 aa8.61□□□□□ -1.03
VRK3-210ENST00000596121 LGALS1P09382 135 aaKnown RBP8.61□□□□□ -1.03
VRK3-210ENST00000596121 NQO2P16083 231 aa8.61□□□□□ -1.03
VRK3-210ENST00000596121 TBPP20226 339 aa8.61□□□□□ -1.03
VRK3-210ENST00000596121 PPP5CP53041 499 aa8.61□□□□□ -1.03
VRK3-210ENST00000596121 OR2B8PP59922 312 aa8.61□□□□□ -1.03
VRK3-210ENST00000596121 KRTAP10-11P60412 298 aa8.61□□□□□ -1.03
VRK3-210ENST00000596121 SSBP1Q04837 148 aaKnown RBP8.61□□□□□ -1.03
VRK3-210ENST00000596121 ZNF79Q15937 498 aa8.61□□□□□ -1.03
VRK3-210ENST00000596121 CCDC190Q86UF4 302 aa8.61□□□□□ -1.03
VRK3-210ENST00000596121 CMTM1Q8IZ96 169 aa8.61□□□□□ -1.03
VRK3-210ENST00000596121 TTC9CQ8N5M4 171 aa8.61□□□□□ -1.03
VRK3-210ENST00000596121 OR4C16Q8NGL9 310 aa8.61□□□□□ -1.03
VRK3-210ENST00000596121 TERB2Q8NHR7 220 aa8.61□□□□□ -1.03
VRK3-210ENST00000596121 CD300LFQ8TDQ1 290 aa8.61□□□□□ -1.03
VRK3-210ENST00000596121 BORCS5Q969J3 196 aa8.61□□□□□ -1.03
VRK3-210ENST00000596121 TMEM68Q96MH6 324 aa8.61□□□□□ -1.03
VRK3-210ENST00000596121 FYTTD1Q96QD9 318 aaKnown RBP8.61□□□□□ -1.03
VRK3-210ENST00000596121 PHB2Q99623 299 aa8.61□□□□□ -1.03
VRK3-210ENST00000596121 SLC2A9Q9NRM0 540 aa8.61□□□□□ -1.03
VRK3-210ENST00000596121 TMEM140Q9NV12 185 aa8.61□□□□□ -1.03
VRK3-210ENST00000596121 DBX1A6NMT0 343 aa8.6□□□□□ -1.03
VRK3-210ENST00000596121 H3BUA1 57 aa8.6□□□□□ -1.03
VRK3-210ENST00000596121 MPPED1O15442 326 aa8.6□□□□□ -1.03
VRK3-210ENST00000596121 KRASP01116 189 aa8.6□□□□□ -1.03
VRK3-210ENST00000596121 OR9G9P0C7N8 305 aa8.6□□□□□ -1.03
VRK3-210ENST00000596121 AREGP15514 252 aa8.6□□□□□ -1.03
VRK3-210ENST00000596121 HLA-GP17693 338 aa8.6□□□□□ -1.03
VRK3-210ENST00000596121 HOXD3P31249 432 aaPredicted RBP8.6□□□□□ -1.03
VRK3-210ENST00000596121 MAS1LP35410 378 aa8.6□□□□□ -1.03
VRK3-210ENST00000596121 G6PCP35575 357 aa8.6□□□□□ -1.03
VRK3-210ENST00000596121 RPL27AP46776 148 aaKnown RBP8.6□□□□□ -1.03
VRK3-210ENST00000596121 RAB25P57735 213 aa8.6□□□□□ -1.03
VRK3-210ENST00000596121 RPL8P62917 257 aaKnown RBP8.6□□□□□ -1.03
VRK3-210ENST00000596121 SCGB2B2Q4G0G5 96 aa8.6□□□□□ -1.03
VRK3-210ENST00000596121 LPCAT3Q6P1A2 487 aa8.6□□□□□ -1.03
VRK3-210ENST00000596121 OR13C8Q8NGS7 320 aa8.6□□□□□ -1.03
VRK3-210ENST00000596121 OR4A5Q8NH83 315 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms