RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 LINC01548A6NM66 108 aa15.28■□□□□ 0.04
PNKP-207ENST00000596014 PGAM2P15259 253 aa15.28■□□□□ 0.04
PNKP-207ENST00000596014 KIR2DS2P43631 304 aa15.28■□□□□ 0.04
PNKP-207ENST00000596014 SLC25A42Q86VD7 318 aa15.28■□□□□ 0.04
PNKP-207ENST00000596014 SPAG16Q8N0X2 631 aa15.28■□□□□ 0.04
PNKP-207ENST00000596014 C12orf45Q8N5I9 185 aaPredicted RBP15.28■□□□□ 0.04
PNKP-207ENST00000596014 OR4S2Q8NH73 311 aa15.28■□□□□ 0.04
PNKP-207ENST00000596014 MARCH1Q8TCQ1 289 aa15.28■□□□□ 0.04
PNKP-207ENST00000596014 WFDC12Q8WWY7 111 aa15.28■□□□□ 0.04
PNKP-207ENST00000596014 GON7Q9BXV9 100 aa15.28■□□□□ 0.04
PNKP-207ENST00000596014 METTL1Q9UBP6 276 aaKnown RBP15.28■□□□□ 0.04
PNKP-207ENST00000596014 TNCP24821 2201 aa15.28■□□□□ 0.04
PNKP-207ENST00000596014 SLC25A17O43808 307 aa15.27■□□□□ 0.03
PNKP-207ENST00000596014 RAMP3O60896 148 aa15.27■□□□□ 0.03
PNKP-207ENST00000596014 OR2A4O95047 310 aa15.27■□□□□ 0.03
PNKP-207ENST00000596014 HLA-AP01891 365 aaKnown RBP15.27■□□□□ 0.03
PNKP-207ENST00000596014 HLA-DRB1P01911 266 aa15.27■□□□□ 0.03
PNKP-207ENST00000596014 TAS2R31P59538 309 aa15.27■□□□□ 0.03
PNKP-207ENST00000596014 DHRS2Q13268 280 aa15.27■□□□□ 0.03
PNKP-207ENST00000596014 PLGLAQ15195 96 aa15.27■□□□□ 0.03
PNKP-207ENST00000596014 C2orf68Q2NKX9 166 aa15.27■□□□□ 0.03
PNKP-207ENST00000596014 SLC35E3Q7Z769 313 aa15.27■□□□□ 0.03
PNKP-207ENST00000596014 OR2A7Q96R45 310 aa15.27■□□□□ 0.03
PNKP-207ENST00000596014 HSPB9Q9BQS6 159 aa15.27■□□□□ 0.03
PNKP-207ENST00000596014 WNT10AQ9GZT5 417 aa15.27■□□□□ 0.03
PNKP-207ENST00000596014 SLC2A9Q9NRM0 540 aa15.27■□□□□ 0.03
PNKP-207ENST00000596014 DNHD1Q96M86 4753 aa15.27■□□□□ 0.03
PNKP-207ENST00000596014 FCN1O00602 326 aa15.26■□□□□ 0.03
PNKP-207ENST00000596014 RBFOX2O43251 390 aaKnown RBP eCLIP15.26■□□□□ 0.031e-6■■■■□ 23.3
PNKP-207ENST00000596014 PI3P19957 117 aa15.26■□□□□ 0.03
PNKP-207ENST00000596014 S100GP29377 79 aa15.26■□□□□ 0.03
PNKP-207ENST00000596014 LYG2Q86SG7 212 aa15.26■□□□□ 0.03
PNKP-207ENST00000596014 ZNF747Q9BV97 191 aa15.26■□□□□ 0.03
PNKP-207ENST00000596014 KCNAB3O43448 404 aa15.25■□□□□ 0.03
PNKP-207ENST00000596014 CRYGBP07316 175 aa15.25■□□□□ 0.03
PNKP-207ENST00000596014 ECI1P42126 302 aa15.25■□□□□ 0.03
PNKP-207ENST00000596014 DHODHQ02127 395 aa15.25■□□□□ 0.03
PNKP-207ENST00000596014 PPP1R1AQ13522 171 aa15.25■□□□□ 0.03
PNKP-207ENST00000596014 TBC1D26Q86UD7 250 aa15.25■□□□□ 0.03
PNKP-207ENST00000596014 KLHDC1Q8N7A1 406 aa15.25■□□□□ 0.03
PNKP-207ENST00000596014 UXS1Q8NBZ7 420 aa15.25■□□□□ 0.03
PNKP-207ENST00000596014 CD300LFQ8TDQ1 290 aa15.25■□□□□ 0.03
PNKP-207ENST00000596014 ASB13Q8WXK3 278 aa15.25■□□□□ 0.03
PNKP-207ENST00000596014 SIX6O95475 246 aa15.25■□□□□ 0.03
PNKP-207ENST00000596014 F2RP25116 425 aa15.25■□□□□ 0.03
PNKP-207ENST00000596014 H2BFSP57053 126 aa15.25■□□□□ 0.03
PNKP-207ENST00000596014 PIGPP57054 158 aa15.25■□□□□ 0.03
PNKP-207ENST00000596014 KRTAP10-3P60369 221 aa15.25■□□□□ 0.03
PNKP-207ENST00000596014 UBE2KP61086 200 aa15.25■□□□□ 0.03
PNKP-207ENST00000596014 SRSF4Q08170 494 aaKnown RBP15.25■□□□□ 0.03
PNKP-207ENST00000596014 SURF2Q15527 256 aaPredicted RBP15.25■□□□□ 0.03
PNKP-207ENST00000596014 PPP1R27Q86WC6 154 aa15.25■□□□□ 0.03
PNKP-207ENST00000596014 TPSG1Q9NRR2 321 aa15.25■□□□□ 0.03
PNKP-207ENST00000596014 IGHV7-81A0A0B4J1V7 117 aa15.24■□□□□ 0.03
PNKP-207ENST00000596014 CTSDP07339 412 aaPredicted RBP15.24■□□□□ 0.03
PNKP-207ENST00000596014 RND3P61587 244 aa15.24■□□□□ 0.03
PNKP-207ENST00000596014 VMA21Q3ZAQ7 101 aa15.24■□□□□ 0.03
PNKP-207ENST00000596014 FOXRED2Q8IWF2 684 aa15.24■□□□□ 0.03
PNKP-207ENST00000596014 TEX45Q8NA69 505 aa15.24■□□□□ 0.03
PNKP-207ENST00000596014 ADAD2Q8NCV1 583 aaKnown RBP15.24■□□□□ 0.03
PNKP-207ENST00000596014 NOL4LQ96MY1 436 aaPredicted RBP15.24■□□□□ 0.03
PNKP-207ENST00000596014 FAM210AQ96ND0 272 aa15.24■□□□□ 0.03
PNKP-207ENST00000596014 CLCC1Q96S66 551 aa15.24■□□□□ 0.03
PNKP-207ENST00000596014 LINC00527Q9UJ94 153 aa15.24■□□□□ 0.03
PNKP-207ENST00000596014 GPR132Q9UNW8 380 aa15.24■□□□□ 0.03
PNKP-207ENST00000596014 C9orf170A2RU37 121 aa15.23■□□□□ 0.03
PNKP-207ENST00000596014 AP4M1O00189 453 aa15.23■□□□□ 0.03
PNKP-207ENST00000596014 MPPED1O15442 326 aa15.23■□□□□ 0.03
PNKP-207ENST00000596014 HPRT1P00492 218 aa15.23■□□□□ 0.03
PNKP-207ENST00000596014 CX3CL1P78423 397 aa15.23■□□□□ 0.03
PNKP-207ENST00000596014 CENPVQ7Z7K6 275 aaPredicted RBP15.23■□□□□ 0.03
PNKP-207ENST00000596014 VKORC1L1Q8N0U8 176 aa15.23■□□□□ 0.03
PNKP-207ENST00000596014 TCTEX1D1Q8N7M0 179 aa15.23■□□□□ 0.03
PNKP-207ENST00000596014 OR5M8Q8NGP6 311 aa15.23■□□□□ 0.03
PNKP-207ENST00000596014 WIPF2Q8TF74 440 aaPredicted RBP15.23■□□□□ 0.03
PNKP-207ENST00000596014 WDR89Q96FK6 387 aaPredicted RBP15.23■□□□□ 0.03
PNKP-207ENST00000596014 RTBDNQ9BSG5 229 aaPredicted RBP15.23■□□□□ 0.03
PNKP-207ENST00000596014 HRASP01112 189 aa15.22■□□□□ 0.03
PNKP-207ENST00000596014 SAA1P0DJI8 122 aaPredicted RBP15.22■□□□□ 0.03
PNKP-207ENST00000596014 PJVKQ0ZLH3 352 aa15.22■□□□□ 0.03
PNKP-207ENST00000596014 NDUFA5Q16718 116 aa15.22■□□□□ 0.03
PNKP-207ENST00000596014 ZNF585BQ52M93 769 aa15.22■□□□□ 0.03
PNKP-207ENST00000596014 ZNF562Q6V9R5 426 aa15.22■□□□□ 0.03
PNKP-207ENST00000596014 RHOVQ96L33 236 aa15.22■□□□□ 0.03
PNKP-207ENST00000596014 SCGB3A2Q96PL1 93 aa15.22■□□□□ 0.03
PNKP-207ENST00000596014 C5orf66Q9H5L9 145 aa15.22■□□□□ 0.03
PNKP-207ENST00000596014 PLEKHA2Q9HB19 425 aa15.22■□□□□ 0.03
PNKP-207ENST00000596014 CA2P00918 260 aa15.22■□□□□ 0.03
PNKP-207ENST00000596014 IGF1P05019 195 aa15.22■□□□□ 0.03
PNKP-207ENST00000596014 VAMP1P23763 118 aa15.22■□□□□ 0.03
PNKP-207ENST00000596014 MRGPRG-AS1Q2M3A8 158 aa15.22■□□□□ 0.03
PNKP-207ENST00000596014 STPG2Q8N412 459 aa15.22■□□□□ 0.03
PNKP-207ENST00000596014 MITD1Q8WV92 249 aa15.22■□□□□ 0.03
PNKP-207ENST00000596014 TMEM230Q96A57 120 aa15.22■□□□□ 0.03
PNKP-207ENST00000596014 C14orf166Q9Y224 244 aaKnown RBP15.22■□□□□ 0.03
PNKP-207ENST00000596014 S1PR2O95136 353 aa15.21■□□□□ 0.03
PNKP-207ENST00000596014 AKR1C4P17516 323 aa15.21■□□□□ 0.03
PNKP-207ENST00000596014 LPAR6P43657 344 aa15.21■□□□□ 0.03
PNKP-207ENST00000596014 SHISA2Q6UWI4 295 aa15.21■□□□□ 0.03
PNKP-207ENST00000596014 CCDC71LQ8N9Z2 235 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms