RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 PRB3Q04118 309 aaPredicted RBP10.28□□□□□ -0.76
SCAF1-202ENST00000595242 ZNF585BQ52M93 769 aa10.28□□□□□ -0.76
SCAF1-202ENST00000595242 CASC10Q5T4H9 136 aa10.28□□□□□ -0.76
SCAF1-202ENST00000595242 THOC7Q6I9Y2 204 aaKnown RBP10.28□□□□□ -0.76
SCAF1-202ENST00000595242 BAP18Q8IXM2 172 aa10.28□□□□□ -0.76
SCAF1-202ENST00000595242 UBALD1Q8TB05 177 aa10.28□□□□□ -0.76
SCAF1-202ENST00000595242 LRRC20Q8TCA0 184 aa10.28□□□□□ -0.76
SCAF1-202ENST00000595242 EDARADDQ8WWZ3 215 aa10.28□□□□□ -0.76
SCAF1-202ENST00000595242 C5orf30Q96GV9 206 aa10.28□□□□□ -0.76
SCAF1-202ENST00000595242 YPEL2Q96QA6 119 aa10.28□□□□□ -0.76
SCAF1-202ENST00000595242 LINC00574Q9H8X3 128 aa10.28□□□□□ -0.76
SCAF1-202ENST00000595242 GAR1Q9NY12 217 aaKnown RBP10.28□□□□□ -0.76
SCAF1-202ENST00000595242 RBM7Q9Y580 266 aaKnown RBP10.28□□□□□ -0.76
SCAF1-202ENST00000595242 KPTNQ9Y664 436 aa10.28□□□□□ -0.76
SCAF1-202ENST00000595242 A0A1W2PRD5 423 aa10.27□□□□□ -0.77
SCAF1-202ENST00000595242 A0A1W2PRF3 423 aa10.27□□□□□ -0.77
SCAF1-202ENST00000595242 A0A1W2PRM7 423 aa10.27□□□□□ -0.77
SCAF1-202ENST00000595242 FGF16O43320 207 aa10.27□□□□□ -0.77
SCAF1-202ENST00000595242 SCGB1D2O95969 90 aa10.27□□□□□ -0.77
SCAF1-202ENST00000595242 SERPINE2P07093 398 aa10.27□□□□□ -0.77
SCAF1-202ENST00000595242 NHLRC4P0CG21 123 aaPredicted RBP10.27□□□□□ -0.77
SCAF1-202ENST00000595242 PPP1CCP36873 323 aaKnown RBP10.27□□□□□ -0.77
SCAF1-202ENST00000595242 CATR1Q13166 79 aa10.27□□□□□ -0.77
SCAF1-202ENST00000595242 EDDM3AQ14507 147 aa10.27□□□□□ -0.77
SCAF1-202ENST00000595242 LY6EQ16553 131 aa10.27□□□□□ -0.77
SCAF1-202ENST00000595242 ZNF66Q6ZN08 573 aa10.27□□□□□ -0.77
SCAF1-202ENST00000595242 COMMD7Q86VX2 200 aa10.27□□□□□ -0.77
SCAF1-202ENST00000595242 TPRX1Q8N7U7 411 aa10.27□□□□□ -0.77
SCAF1-202ENST00000595242 BOLLQ8N9W6 283 aaKnown RBP10.27□□□□□ -0.77
SCAF1-202ENST00000595242 ZNRF1Q8ND25 227 aa10.27□□□□□ -0.77
SCAF1-202ENST00000595242 OR51H1Q8NH63 302 aa10.27□□□□□ -0.77
SCAF1-202ENST00000595242 CORO2AQ92828 525 aa10.27□□□□□ -0.77
SCAF1-202ENST00000595242 GPHA2Q96T91 129 aa10.27□□□□□ -0.77
SCAF1-202ENST00000595242 AGMATQ9BSE5 352 aa10.27□□□□□ -0.77
SCAF1-202ENST00000595242 OR2D2Q9H210 308 aa10.27□□□□□ -0.77
SCAF1-202ENST00000595242 OR2S2Q9NQN1 319 aa10.27□□□□□ -0.77
SCAF1-202ENST00000595242 SIRT7Q9NRC8 400 aa10.27□□□□□ -0.77
SCAF1-202ENST00000595242 GAB2Q9UQC2 676 aa10.27□□□□□ -0.77
SCAF1-202ENST00000595242 A0A0G2JRQ6 117 aa10.26□□□□□ -0.77
SCAF1-202ENST00000595242 A0A1B0GW55 424 aa10.26□□□□□ -0.77
SCAF1-202ENST00000595242 NKX6-3A6NJ46 265 aa10.26□□□□□ -0.77
SCAF1-202ENST00000595242 FCN3O75636 299 aa10.26□□□□□ -0.77
SCAF1-202ENST00000595242 P0C879 139 aa10.26□□□□□ -0.77
SCAF1-202ENST00000595242 DUX4L2P0CJ85 424 aa10.26□□□□□ -0.77
SCAF1-202ENST00000595242 DUX4L3P0CJ86 424 aa10.26□□□□□ -0.77
SCAF1-202ENST00000595242 DUX4L4P0CJ87 422 aa10.26□□□□□ -0.77
SCAF1-202ENST00000595242 DUX4L5P0CJ88 424 aa10.26□□□□□ -0.77
SCAF1-202ENST00000595242 DUX4L6P0CJ89 424 aa10.26□□□□□ -0.77
SCAF1-202ENST00000595242 DUX4L7P0CJ90 424 aa10.26□□□□□ -0.77
SCAF1-202ENST00000595242 MORN2Q502X0 79 aa10.26□□□□□ -0.77
SCAF1-202ENST00000595242 FAM219AQ8IW50 185 aa10.26□□□□□ -0.77
SCAF1-202ENST00000595242 FOXRED2Q8IWF2 684 aa10.26□□□□□ -0.77
SCAF1-202ENST00000595242 EIF4E3Q8N5X7 224 aaKnown RBP10.26□□□□□ -0.77
SCAF1-202ENST00000595242 GPR146Q96CH1 333 aa10.26□□□□□ -0.77
SCAF1-202ENST00000595242 SSX3Q99909 188 aa10.26□□□□□ -0.77
SCAF1-202ENST00000595242 DCTN5Q9BTE1 182 aa10.26□□□□□ -0.77
SCAF1-202ENST00000595242 ARV1Q9H2C2 271 aa10.26□□□□□ -0.77
SCAF1-202ENST00000595242 COA4Q9NYJ1 87 aa10.26□□□□□ -0.77
SCAF1-202ENST00000595242 CALYQ9NYX4 217 aa10.26□□□□□ -0.77
SCAF1-202ENST00000595242 ONECUT1Q9UBC0 465 aa10.26□□□□□ -0.77
SCAF1-202ENST00000595242 DUX4Q9UBX2 424 aa10.26□□□□□ -0.77
SCAF1-202ENST00000595242 FBXL17Q9UF56 701 aa10.26□□□□□ -0.77
SCAF1-202ENST00000595242 HYDINQ4G0P3 5121 aa10.26□□□□□ -0.77
SCAF1-202ENST00000595242 TRAV38-1A0A0B4J264 116 aa10.25□□□□□ -0.77
SCAF1-202ENST00000595242 LCE6AA0A183 80 aa10.25□□□□□ -0.77
SCAF1-202ENST00000595242 MFSD2BA6NFX1 497 aa10.25□□□□□ -0.77
SCAF1-202ENST00000595242 ZNF729A6NN14 1252 aaPredicted RBP10.25□□□□□ -0.77
SCAF1-202ENST00000595242 JTBO76095 146 aa10.25□□□□□ -0.77
SCAF1-202ENST00000595242 IGKV1-5P01602 117 aa10.25□□□□□ -0.77
SCAF1-202ENST00000595242 PVALBP20472 110 aaPredicted RBP10.25□□□□□ -0.77
SCAF1-202ENST00000595242 HOXD3P31249 432 aaPredicted RBP10.25□□□□□ -0.77
SCAF1-202ENST00000595242 SAA4P35542 130 aa10.25□□□□□ -0.77
SCAF1-202ENST00000595242 DLX1P56177 255 aa10.25□□□□□ -0.77
SCAF1-202ENST00000595242 EGFEM1PQ0D2K5 195 aa10.25□□□□□ -0.77
SCAF1-202ENST00000595242 C17orf58Q2M2W7 97 aa10.25□□□□□ -0.77
SCAF1-202ENST00000595242 TCF23Q7RTU1 214 aa10.25□□□□□ -0.77
SCAF1-202ENST00000595242 HSD17B13Q7Z5P4 300 aaPredicted RBP10.25□□□□□ -0.77
SCAF1-202ENST00000595242 PNKDQ8N490 385 aa10.25□□□□□ -0.77
SCAF1-202ENST00000595242 UBAC2Q8NBM4 344 aa10.25□□□□□ -0.77
SCAF1-202ENST00000595242 BEND2Q8NDZ0 799 aa10.25□□□□□ -0.77
SCAF1-202ENST00000595242 OR10A7Q8NGE5 316 aa10.25□□□□□ -0.77
SCAF1-202ENST00000595242 CXorf58Q96LI9 332 aa10.25□□□□□ -0.77
SCAF1-202ENST00000595242 HSD17B10Q99714 261 aaKnown RBP10.25□□□□□ -0.77
SCAF1-202ENST00000595242 NPFFR1Q9GZQ6 430 aa10.25□□□□□ -0.77
SCAF1-202ENST00000595242 LYRM2Q9NU23 88 aaPredicted RBP10.25□□□□□ -0.77
SCAF1-202ENST00000595242 SERTAD4Q9NUC0 356 aa10.25□□□□□ -0.77
SCAF1-202ENST00000595242 RPUSD1Q9UJJ7 312 aaKnown RBP10.25□□□□□ -0.77
SCAF1-202ENST00000595242 KBTBD11-OT1A0A1B0GTJ5 212 aa10.24□□□□□ -0.77
SCAF1-202ENST00000595242 FAM90A26D6RGX4 464 aa10.24□□□□□ -0.77
SCAF1-202ENST00000595242 DVL1O14640 695 aa10.24□□□□□ -0.77
SCAF1-202ENST00000595242 NDUFA2O43678 99 aa10.24□□□□□ -0.77
SCAF1-202ENST00000595242 ATG12O94817 140 aa10.24□□□□□ -0.77
SCAF1-202ENST00000595242 SELLP14151 372 aa10.24□□□□□ -0.77
SCAF1-202ENST00000595242 EDDM3BP56851 147 aa10.24□□□□□ -0.77
SCAF1-202ENST00000595242 RPL30P62888 115 aaKnown RBP10.24□□□□□ -0.77
SCAF1-202ENST00000595242 MEF2CQ06413 473 aaPredicted RBP10.24□□□□□ -0.77
SCAF1-202ENST00000595242 KLRD1Q13241 179 aa10.24□□□□□ -0.77
SCAF1-202ENST00000595242 HABP2Q14520 560 aaPredicted RBP10.24□□□□□ -0.77
SCAF1-202ENST00000595242 AANATQ16613 207 aa10.24□□□□□ -0.77
SCAF1-202ENST00000595242 FAM53AQ6NSI3 398 aaPredicted RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms