RNA–Protein interactions for RNA: ENST00000594759.5

LIG1-207, Transcript of DNA ligase 1, humanhuman

TSL 1 (best)

Gene LIG1, Length 4,102 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-207ENST00000594759 TMEM50AO95807 157 aa10.46□□□□□ -0.74
LIG1-207ENST00000594759 DEFA4P12838 97 aa10.46□□□□□ -0.74
LIG1-207ENST00000594759 CA6P23280 308 aa10.46□□□□□ -0.74
LIG1-207ENST00000594759 GPR12P47775 334 aa10.46□□□□□ -0.74
LIG1-207ENST00000594759 RAB9AP51151 201 aa10.46□□□□□ -0.74
LIG1-207ENST00000594759 RPS20P60866 119 aaKnown RBP10.46□□□□□ -0.74
LIG1-207ENST00000594759 BLNKQ8WV28 456 aa10.46□□□□□ -0.74
LIG1-207ENST00000594759 TMEM45BQ96B21 275 aa10.46□□□□□ -0.74
LIG1-207ENST00000594759 GUCD1Q96NT3 240 aa10.46□□□□□ -0.74
LIG1-207ENST00000594759 TAAR6Q96RI8 345 aa10.46□□□□□ -0.74
LIG1-207ENST00000594759 HSD17B10Q99714 261 aaKnown RBP10.46□□□□□ -0.74
LIG1-207ENST00000594759 AKIRIN1Q9H9L7 192 aaPredicted RBP10.46□□□□□ -0.74
LIG1-207ENST00000594759 ICE1Q9Y2F5 2266 aa10.46□□□□□ -0.74
LIG1-207ENST00000594759 A0A1W2PQD3 144 aa10.45□□□□□ -0.74
LIG1-207ENST00000594759 hDV102S1A0JD36 115 aa10.45□□□□□ -0.74
LIG1-207ENST00000594759 IGHV3-9P01782 118 aa10.45□□□□□ -0.74
LIG1-207ENST00000594759 SMIM13P0DJ93 91 aa10.45□□□□□ -0.74
LIG1-207ENST00000594759 IGLL1P15814 213 aa10.45□□□□□ -0.74
LIG1-207ENST00000594759 RBMXL3Q8N7X1 1067 aaKnown RBP10.45□□□□□ -0.74
LIG1-207ENST00000594759 PLXNA4Q9HCM2 1894 aa10.45□□□□□ -0.74
LIG1-207ENST00000594759 FAM90A26D6RGX4 464 aa10.45□□□□□ -0.74
LIG1-207ENST00000594759 FOXS1O43638 330 aa10.45□□□□□ -0.74
LIG1-207ENST00000594759 NDUFB8O95169 186 aa10.45□□□□□ -0.74
LIG1-207ENST00000594759 IFI6P09912 130 aa10.45□□□□□ -0.74
LIG1-207ENST00000594759 AZU1P20160 251 aa10.45□□□□□ -0.74
LIG1-207ENST00000594759 DUSP13Q9UII6 198 aa10.45□□□□□ -0.74
LIG1-207ENST00000594759 ATP23Q9Y6H3 246 aa10.45□□□□□ -0.74
LIG1-207ENST00000594759 POLEQ07864 2286 aa10.45□□□□□ -0.74
LIG1-207ENST00000594759 IGHV1OR21-1A0A087WYE8 117 aa10.45□□□□□ -0.74
LIG1-207ENST00000594759 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.45□□□□□ -0.74
LIG1-207ENST00000594759 FAM231BA6NCW3 169 aa10.45□□□□□ -0.74
LIG1-207ENST00000594759 FAM181BA6NEQ2 426 aa10.45□□□□□ -0.74
LIG1-207ENST00000594759 HOXC12P31275 282 aa10.45□□□□□ -0.74
LIG1-207ENST00000594759 LTBRP36941 435 aa10.45□□□□□ -0.74
LIG1-207ENST00000594759 SUMO3P55854 103 aaPredicted RBP10.45□□□□□ -0.74
LIG1-207ENST00000594759 RPL15P61313 204 aaKnown RBP10.45□□□□□ -0.74
LIG1-207ENST00000594759 OR1C1Q15619 314 aa10.45□□□□□ -0.74
LIG1-207ENST00000594759 ZNF726P1Q15940 193 aa10.45□□□□□ -0.74
LIG1-207ENST00000594759 THYN1Q9P016 225 aa10.45□□□□□ -0.74
LIG1-207ENST00000594759 WNT16Q9UBV4 365 aa10.45□□□□□ -0.74
LIG1-207ENST00000594759 ANAPC10Q9UM13 185 aa10.45□□□□□ -0.74
LIG1-207ENST00000594759 ZG16O60844 167 aa10.44□□□□□ -0.74
LIG1-207ENST00000594759 GPR6P46095 362 aaPredicted RBP10.44□□□□□ -0.74
LIG1-207ENST00000594759 CEACAM16Q2WEN9 425 aa10.44□□□□□ -0.74
LIG1-207ENST00000594759 TMEM136Q6ZRR5 245 aa10.44□□□□□ -0.74
LIG1-207ENST00000594759 C5orf17Q8NAS9 161 aa10.44□□□□□ -0.74
LIG1-207ENST00000594759 GALMQ96C23 342 aa10.44□□□□□ -0.74
LIG1-207ENST00000594759 CDX2Q99626 313 aaPredicted RBP10.44□□□□□ -0.74
LIG1-207ENST00000594759 F11RQ9Y624 299 aaKnown RBP10.44□□□□□ -0.74
LIG1-207ENST00000594759 ARHGAP21Q5T5U3 1957 aa10.44□□□□□ -0.74
LIG1-207ENST00000594759 A0A0G2JLM5 398 aa10.44□□□□□ -0.74
LIG1-207ENST00000594759 TGFBR3LH3BV60 316 aa10.44□□□□□ -0.74
LIG1-207ENST00000594759 LIPFP07098 398 aa10.44□□□□□ -0.74
LIG1-207ENST00000594759 CD46P15529 392 aa10.44□□□□□ -0.74
LIG1-207ENST00000594759 ZNF83P51522 516 aa10.44□□□□□ -0.74
LIG1-207ENST00000594759 CCL7P80098 99 aa10.44□□□□□ -0.74
LIG1-207ENST00000594759 ABHD17BQ5VST6 288 aa10.44□□□□□ -0.74
LIG1-207ENST00000594759 NHLRC2Q8NBF2 726 aa10.44□□□□□ -0.74
LIG1-207ENST00000594759 RNASE7Q9H1E1 156 aaKnown RBP10.44□□□□□ -0.74
LIG1-207ENST00000594759 ZNF391Q9UJN7 358 aa10.44□□□□□ -0.74
LIG1-207ENST00000594759 COLQQ9Y215 455 aaPredicted RBP10.44□□□□□ -0.74
LIG1-207ENST00000594759 COL4A6Q14031 1691 aa10.44□□□□□ -0.74
LIG1-207ENST00000594759 LOC105371242A0A075B767 164 aa10.44□□□□□ -0.74
LIG1-207ENST00000594759 PPIAL4CA0A0B4J2A2 164 aa10.44□□□□□ -0.74
LIG1-207ENST00000594759 MPDU1O75352 247 aa10.44□□□□□ -0.74
LIG1-207ENST00000594759 PPIAL4GP0DN37 164 aa10.44□□□□□ -0.74
LIG1-207ENST00000594759 HSD52Q0P140 79 aa10.44□□□□□ -0.74
LIG1-207ENST00000594759 TNXAQ16473 311 aa10.44□□□□□ -0.74
LIG1-207ENST00000594759 NMSQ5H8A3 153 aa10.44□□□□□ -0.74
LIG1-207ENST00000594759 PLPPR1Q8TBJ4 325 aa10.44□□□□□ -0.74
LIG1-207ENST00000594759 TSKUQ8WUA8 353 aa10.44□□□□□ -0.74
LIG1-207ENST00000594759 OR5P3Q8WZ94 311 aa10.44□□□□□ -0.74
LIG1-207ENST00000594759 PERPQ96FX8 193 aa10.44□□□□□ -0.74
LIG1-207ENST00000594759 CYYR1Q96J86 154 aa10.44□□□□□ -0.74
LIG1-207ENST00000594759 GTF3C1Q12789 2109 aa10.44□□□□□ -0.74
LIG1-207ENST00000594759 MC5RP33032 325 aa10.43□□□□□ -0.74
LIG1-207ENST00000594759 PLXNA3P51805 1871 aa10.43□□□□□ -0.74
LIG1-207ENST00000594759 A0A0G2JMM0 328 aa10.43□□□□□ -0.74
LIG1-207ENST00000594759 A0A1W2PPB8 328 aa10.43□□□□□ -0.74
LIG1-207ENST00000594759 LILRA5A6NI73 299 aa10.43□□□□□ -0.74
LIG1-207ENST00000594759 KIR3DP1A8MWS1 328 aa10.43□□□□□ -0.74
LIG1-207ENST00000594759 ZNF32P17041 273 aa10.43□□□□□ -0.74
LIG1-207ENST00000594759 TM4SF20Q53R12 229 aa10.43□□□□□ -0.74
LIG1-207ENST00000594759 IGKV1D-13A0A0B4J2D9 117 aa10.43□□□□□ -0.74
LIG1-207ENST00000594759 F2Z2F3 143 aa10.43□□□□□ -0.74
LIG1-207ENST00000594759 IGHMP01871 453 aa10.43□□□□□ -0.74
LIG1-207ENST00000594759 IGKV1-13P0DP09 117 aa10.43□□□□□ -0.74
LIG1-207ENST00000594759 GCHFRP30047 84 aa10.43□□□□□ -0.74
LIG1-207ENST00000594759 RPL8P62917 257 aaKnown RBP10.43□□□□□ -0.74
LIG1-207ENST00000594759 PI4KAP42356 2102 aa10.43□□□□□ -0.74
LIG1-207ENST00000594759 TCF20Q9UGU0 1960 aaKnown RBP10.43□□□□□ -0.74
LIG1-207ENST00000594759 FKBP2P26885 142 aaKnown RBP10.43□□□□□ -0.74
LIG1-207ENST00000594759 NXPH1P58417 271 aa10.43□□□□□ -0.74
LIG1-207ENST00000594759 UBE2L3P68036 154 aaKnown RBP10.43□□□□□ -0.74
LIG1-207ENST00000594759 LINC00696Q6ZRV3 163 aa10.43□□□□□ -0.74
LIG1-207ENST00000594759 EAF1Q96JC9 268 aaPredicted RBP10.43□□□□□ -0.74
LIG1-207ENST00000594759 PRDM6Q9NQX0 595 aa10.43□□□□□ -0.74
LIG1-207ENST00000594759 CNIH1O95406 144 aa10.42□□□□□ -0.74
LIG1-207ENST00000594759 FTH1P19P0C7X4 201 aa10.42□□□□□ -0.74
LIG1-207ENST00000594759 VSTM2AQ8TAG5 236 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms