RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 OBP2BQ9NPH6 170 aa12.86□□□□□ -0.35
PNKP-204ENST00000594661 TUBG2Q9NRH3 451 aa12.86□□□□□ -0.35
PNKP-204ENST00000594661 RAXQ9Y2V3 346 aa12.86□□□□□ -0.35
PNKP-204ENST00000594661 SLC25A15Q9Y619 301 aa12.86□□□□□ -0.35
PNKP-204ENST00000594661 RHBDL1O75783 438 aa12.86□□□□□ -0.35
PNKP-204ENST00000594661 SUMO1P63165 101 aaKnown RBP12.86□□□□□ -0.35
PNKP-204ENST00000594661 MSMO1Q15800 293 aa12.86□□□□□ -0.35
PNKP-204ENST00000594661 PRR30Q53SZ7 412 aaPredicted RBP12.86□□□□□ -0.35
PNKP-204ENST00000594661 LCN15Q6UWW0 184 aa12.86□□□□□ -0.35
PNKP-204ENST00000594661 CDC42EP3Q9UKI2 254 aa12.86□□□□□ -0.35
PNKP-204ENST00000594661 RNF212BA8MTL3 300 aa12.85□□□□□ -0.35
PNKP-204ENST00000594661 IQCF6A8MYZ5 107 aa12.85□□□□□ -0.35
PNKP-204ENST00000594661 CST7O76096 145 aa12.85□□□□□ -0.35
PNKP-204ENST00000594661 VENTXO95231 258 aa12.85□□□□□ -0.35
PNKP-204ENST00000594661 NAPSAO96009 420 aa12.85□□□□□ -0.35
PNKP-204ENST00000594661 PPYP01298 95 aa12.85□□□□□ -0.35
PNKP-204ENST00000594661 MAP1BP46821 2468 aaKnown RBP12.85□□□□□ -0.35
PNKP-204ENST00000594661 YPEL3P61236 119 aaPredicted RBP12.85□□□□□ -0.35
PNKP-204ENST00000594661 MEF2BQ02080 365 aaPredicted RBP12.85□□□□□ -0.35
PNKP-204ENST00000594661 DOLPP1Q86YN1 238 aa12.85□□□□□ -0.35
PNKP-204ENST00000594661 OR11L1Q8NGX0 322 aa12.85□□□□□ -0.35
PNKP-204ENST00000594661 PLPPR1Q8TBJ4 325 aa12.85□□□□□ -0.35
PNKP-204ENST00000594661 SFXN3Q9BWM7 321 aa12.85□□□□□ -0.35
PNKP-204ENST00000594661 RNF24Q9Y225 148 aa12.85□□□□□ -0.35
PNKP-204ENST00000594661 SPTBN4Q9H254 2564 aa12.85□□□□□ -0.35
PNKP-204ENST00000594661 IGHV1-69-2A0A0G2JMI3 117 aa12.85□□□□□ -0.35
PNKP-204ENST00000594661 NKX2-6A6NCS4 301 aa12.85□□□□□ -0.35
PNKP-204ENST00000594661 HS3ST1O14792 307 aa12.85□□□□□ -0.35
PNKP-204ENST00000594661 SSSCA1O60232 199 aa12.85□□□□□ -0.35
PNKP-204ENST00000594661 ADMP35318 185 aa12.85□□□□□ -0.35
PNKP-204ENST00000594661 TMPRSS3P57727 454 aa12.85□□□□□ -0.35
PNKP-204ENST00000594661 Q6ZS49 121 aa12.85□□□□□ -0.35
PNKP-204ENST00000594661 FAM58AQ8N1B3 248 aa12.85□□□□□ -0.35
PNKP-204ENST00000594661 RTL8AQ9BWD3 113 aa12.85□□□□□ -0.35
PNKP-204ENST00000594661 PARLQ9H300 379 aa12.85□□□□□ -0.35
PNKP-204ENST00000594661 IL19Q9UHD0 177 aa12.85□□□□□ -0.35
PNKP-204ENST00000594661 IGF2RP11717 2491 aa12.84□□□□□ -0.35
PNKP-204ENST00000594661 K7ERU9 68 aa12.84□□□□□ -0.35
PNKP-204ENST00000594661 GYPAP02724 150 aa12.84□□□□□ -0.35
PNKP-204ENST00000594661 CTXN2P0C2S0 81 aa12.84□□□□□ -0.35
PNKP-204ENST00000594661 CD99P14209 185 aa12.84□□□□□ -0.35
PNKP-204ENST00000594661 LINC00596Q86U02 117 aa12.84□□□□□ -0.35
PNKP-204ENST00000594661 SNRNP40Q96DI7 357 aaKnown RBP12.84□□□□□ -0.35
PNKP-204ENST00000594661 SPIN2AQ99865 258 aa12.84□□□□□ -0.35
PNKP-204ENST00000594661 SPIN2BQ9BPZ2 258 aa12.84□□□□□ -0.35
PNKP-204ENST00000594661 PKIBQ9C010 78 aa12.84□□□□□ -0.35
PNKP-204ENST00000594661 ZNF430Q9H8G1 570 aaPredicted RBP12.84□□□□□ -0.35
PNKP-204ENST00000594661 SLC35D1Q9NTN3 355 aa12.84□□□□□ -0.35
PNKP-204ENST00000594661 FZR1Q9UM11 496 aa12.84□□□□□ -0.35
PNKP-204ENST00000594661 KIAA2026Q5HYC2 2103 aa12.84□□□□□ -0.35
PNKP-204ENST00000594661 RP1L1Q8IWN7 2480 aaPredicted RBP12.84□□□□□ -0.35
PNKP-204ENST00000594661 IGHV3-64DA0A0J9YX35 117 aa12.83□□□□□ -0.35
PNKP-204ENST00000594661 A0A0U1RQK1 487 aa12.83□□□□□ -0.35
PNKP-204ENST00000594661 ZNF320A2RRD8 509 aa12.83□□□□□ -0.35
PNKP-204ENST00000594661 J3QT63 122 aa12.83□□□□□ -0.35
PNKP-204ENST00000594661 SCTP09683 121 aa12.83□□□□□ -0.35
PNKP-204ENST00000594661 SRPXP78539 464 aa12.83□□□□□ -0.35
PNKP-204ENST00000594661 FOXL1Q12952 345 aa12.83□□□□□ -0.35
PNKP-204ENST00000594661 ZNF154Q13106 437 aa12.83□□□□□ -0.35
PNKP-204ENST00000594661 SRSF7Q16629 238 aaKnown RBP eCLIP12.83□□□□□ -0.35
PNKP-204ENST00000594661 TMEM217Q8N7C4 229 aa12.83□□□□□ -0.35
PNKP-204ENST00000594661 CCDC71LQ8N9Z2 235 aa12.83□□□□□ -0.35
PNKP-204ENST00000594661 PSMG3Q9BT73 122 aaPredicted RBP12.83□□□□□ -0.35
PNKP-204ENST00000594661 CLN8Q9UBY8 286 aa12.83□□□□□ -0.35
PNKP-204ENST00000594661 FBXL7Q9UJT9 491 aa12.83□□□□□ -0.35
PNKP-204ENST00000594661 DIRC3C9JPN6 131 aa12.83□□□□□ -0.36
PNKP-204ENST00000594661 PRRG2O14669 202 aa12.83□□□□□ -0.36
PNKP-204ENST00000594661 ZNF737O75373 536 aa12.83□□□□□ -0.36
PNKP-204ENST00000594661 SERF1AO75920 110 aa12.83□□□□□ -0.36
PNKP-204ENST00000594661 TMEM50AO95807 157 aa12.83□□□□□ -0.36
PNKP-204ENST00000594661 TSPOP30536 169 aa12.83□□□□□ -0.36
PNKP-204ENST00000594661 HINT1P49773 126 aaPredicted RBP12.83□□□□□ -0.36
PNKP-204ENST00000594661 ZNF83P51522 516 aa12.83□□□□□ -0.36
PNKP-204ENST00000594661 TIMM23BQ5SRD1 257 aa12.83□□□□□ -0.36
PNKP-204ENST00000594661 FAM78BQ5VT40 261 aa12.83□□□□□ -0.36
PNKP-204ENST00000594661 GFRALQ6UXV0 394 aa12.83□□□□□ -0.36
PNKP-204ENST00000594661 KLHDC1Q8N7A1 406 aa12.83□□□□□ -0.36
PNKP-204ENST00000594661 SCCPDHQ8NBX0 429 aa12.83□□□□□ -0.36
PNKP-204ENST00000594661 RDH5Q92781 318 aa12.83□□□□□ -0.36
PNKP-204ENST00000594661 PATZ1Q9HBE1 687 aaKnown RBP12.83□□□□□ -0.36
PNKP-204ENST00000594661 IGHV2-26A0A0B4J1V2 119 aa12.82□□□□□ -0.36
PNKP-204ENST00000594661 KIR2DS1A0A191URI9 304 aa12.82□□□□□ -0.36
PNKP-204ENST00000594661 LRP5LA4QPB2 252 aa12.82□□□□□ -0.36
PNKP-204ENST00000594661 PHF1O43189 567 aaPredicted RBP12.82□□□□□ -0.36
PNKP-204ENST00000594661 MLNRO43193 412 aa12.82□□□□□ -0.36
PNKP-204ENST00000594661 IFNA5P01569 189 aa12.82□□□□□ -0.36
PNKP-204ENST00000594661 KIR2DS4P43632 304 aa12.82□□□□□ -0.36
PNKP-204ENST00000594661 KIR2DS1Q14954 304 aa12.82□□□□□ -0.36
PNKP-204ENST00000594661 PNKDQ8N490 385 aa12.82□□□□□ -0.36
PNKP-204ENST00000594661 FAM169BQ8N8A8 192 aa12.82□□□□□ -0.36
PNKP-204ENST00000594661 OR5B3Q8NH48 314 aa12.82□□□□□ -0.36
PNKP-204ENST00000594661 VSIRQ9H7M9 311 aa12.82□□□□□ -0.36
PNKP-204ENST00000594661 TRAV24A0A0B4J272 114 aa12.82□□□□□ -0.36
PNKP-204ENST00000594661 A0A0G2JNJ9 132 aa12.82□□□□□ -0.36
PNKP-204ENST00000594661 UCP1P25874 307 aa12.82□□□□□ -0.36
PNKP-204ENST00000594661 FABP6P51161 128 aa12.82□□□□□ -0.36
PNKP-204ENST00000594661 ID3Q02535 119 aa12.82□□□□□ -0.36
PNKP-204ENST00000594661 ZGRF1Q86YA3 2104 aa12.82□□□□□ -0.36
PNKP-204ENST00000594661 TMEM56Q96MV1 263 aa12.82□□□□□ -0.36
PNKP-204ENST00000594661 Q9UFV3 132 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms