RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 SHBGP04278 402 aa1.9□□□□□ -2.11
VRK3-204ENST00000593912 EIF4EP06730 217 aaKnown RBP1.9□□□□□ -2.11
VRK3-204ENST00000593912 ABHD2P08910 425 aa1.9□□□□□ -2.11
VRK3-204ENST00000593912 MRPL3P09001 348 aaKnown RBP1.9□□□□□ -2.11
VRK3-204ENST00000593912 SAA1P0DJI8 122 aaPredicted RBP1.9□□□□□ -2.11
VRK3-204ENST00000593912 KITP10721 976 aa1.9□□□□□ -2.11
VRK3-204ENST00000593912 DEFA4P12838 97 aa1.9□□□□□ -2.11
VRK3-204ENST00000593912 HLA-DRB4P13762 266 aa1.9□□□□□ -2.11
VRK3-204ENST00000593912 ELK1P19419 428 aa1.9□□□□□ -2.11
VRK3-204ENST00000593912 PRKACBP22694 351 aa1.9□□□□□ -2.11
VRK3-204ENST00000593912 PAFAH1B1P43034 410 aa1.9□□□□□ -2.11
VRK3-204ENST00000593912 GSSP48637 474 aa1.9□□□□□ -2.11
VRK3-204ENST00000593912 SLC1A6P48664 564 aa1.9□□□□□ -2.11
VRK3-204ENST00000593912 NUDT2P50583 147 aa1.9□□□□□ -2.11
VRK3-204ENST00000593912 BLVRAP53004 296 aa1.9□□□□□ -2.11
VRK3-204ENST00000593912 SELENOWP63302 87 aa1.9□□□□□ -2.11
VRK3-204ENST00000593912 INSL4Q14641 139 aa1.9□□□□□ -2.11
VRK3-204ENST00000593912 YIF1BQ5BJH7 314 aa1.9□□□□□ -2.11
VRK3-204ENST00000593912 KDM4DQ6B0I6 523 aa1.9□□□□□ -2.11
VRK3-204ENST00000593912 ZNF322Q6U7Q0 402 aaPredicted RBP1.9□□□□□ -2.11
VRK3-204ENST00000593912 LYPD5Q6UWN5 251 aa1.9□□□□□ -2.11
VRK3-204ENST00000593912 CD300LDQ6UXZ3 194 aa1.9□□□□□ -2.11
VRK3-204ENST00000593912 SAXO1Q8IYX7 474 aa1.9□□□□□ -2.11
VRK3-204ENST00000593912 SPATA4Q8NEY3 305 aa1.9□□□□□ -2.11
VRK3-204ENST00000593912 OR13C9Q8NGT0 318 aa1.9□□□□□ -2.11
VRK3-204ENST00000593912 IL1F10Q8WWZ1 152 aa1.9□□□□□ -2.11
VRK3-204ENST00000593912 DGCR14Q96DF8 476 aaKnown RBP1.9□□□□□ -2.11
VRK3-204ENST00000593912 BSCL2Q96G97 398 aaPredicted RBP1.9□□□□□ -2.11
VRK3-204ENST00000593912 OR10C1Q96KK4 312 aa1.9□□□□□ -2.11
VRK3-204ENST00000593912 Q96MT0 163 aa1.9□□□□□ -2.11
VRK3-204ENST00000593912 FMO2Q99518 471 aa1.9□□□□□ -2.11
VRK3-204ENST00000593912 CGREF1Q99674 301 aa1.9□□□□□ -2.11
VRK3-204ENST00000593912 KCTD14Q9BQ13 255 aaPredicted RBP1.9□□□□□ -2.11
VRK3-204ENST00000593912 TMEM208Q9BTX3 173 aa1.9□□□□□ -2.11
VRK3-204ENST00000593912 MROQ9BYG7 248 aa1.9□□□□□ -2.11
VRK3-204ENST00000593912 ANKRD19PQ9H560 264 aa1.9□□□□□ -2.11
VRK3-204ENST00000593912 ST3GAL6Q9Y274 331 aa1.9□□□□□ -2.11
VRK3-204ENST00000593912 R4GMQ9 66 aa1.9□□□□□ -2.11
VRK3-204ENST00000593912 HLA-DRB4X5D2U9 266 aa1.9□□□□□ -2.11
VRK3-204ENST00000593912 LOC107986453A0A1B0GWG9 222 aa1.89□□□□□ -2.11
VRK3-204ENST00000593912 A0A1W2PP11 408 aa1.89□□□□□ -2.11
VRK3-204ENST00000593912 A0A1W2PQL4 384 aaPredicted RBP1.89□□□□□ -2.11
VRK3-204ENST00000593912 A0A1W2PRQ8 180 aa1.89□□□□□ -2.11
VRK3-204ENST00000593912 GAGE12BA1L429 117 aa1.89□□□□□ -2.11
VRK3-204ENST00000593912 H3BNG1 76 aa1.89□□□□□ -2.11
VRK3-204ENST00000593912 M0R1X1 148 aa1.89□□□□□ -2.11
VRK3-204ENST00000593912 ARPC2O15144 300 aa1.89□□□□□ -2.11
VRK3-204ENST00000593912 OGG1O15527 345 aa1.89□□□□□ -2.11
VRK3-204ENST00000593912 E2F6O75461 281 aa1.89□□□□□ -2.11
VRK3-204ENST00000593912 GAGE7O76087 117 aa1.89□□□□□ -2.11
VRK3-204ENST00000593912 ACTL6BO94805 426 aa1.89□□□□□ -2.11
VRK3-204ENST00000593912 CDRT1O95170 752 aa1.89□□□□□ -2.11
VRK3-204ENST00000593912 CRYZL1O95825 349 aa1.89□□□□□ -2.11
VRK3-204ENST00000593912 OCM2P0CE71 109 aa1.89□□□□□ -2.11
VRK3-204ENST00000593912 OCMP0CE72 109 aaPredicted RBP1.89□□□□□ -2.11
VRK3-204ENST00000593912 CHTF8P0CG12 524 aa1.89□□□□□ -2.11
VRK3-204ENST00000593912 GAGE12FP0CL80 117 aa1.89□□□□□ -2.11
VRK3-204ENST00000593912 GAGE12GP0CL81 117 aa1.89□□□□□ -2.11
VRK3-204ENST00000593912 GAGE12IP0CL82 117 aa1.89□□□□□ -2.11
VRK3-204ENST00000593912 CRYGAP11844 174 aa1.89□□□□□ -2.11
VRK3-204ENST00000593912 HIST1H1BP16401 226 aaKnown RBP1.89□□□□□ -2.11
VRK3-204ENST00000593912 PTBP1P26599 531 aaKnown RBP eCLIP1.89□□□□□ -2.11
VRK3-204ENST00000593912 KDELR2P33947 212 aa1.89□□□□□ -2.11
VRK3-204ENST00000593912 NKX2-1P43699 371 aaPredicted RBP1.89□□□□□ -2.11
VRK3-204ENST00000593912 RPL27AP46776 148 aaKnown RBP1.89□□□□□ -2.11
VRK3-204ENST00000593912 PSMD7P51665 324 aa1.89□□□□□ -2.11
VRK3-204ENST00000593912 RBM11P57052 281 aaKnown RBP1.89□□□□□ -2.11
VRK3-204ENST00000593912 PRR3P79522 188 aaKnown RBP1.89□□□□□ -2.11
VRK3-204ENST00000593912 DHRS2Q13268 280 aa1.89□□□□□ -2.11
VRK3-204ENST00000593912 DGCR6Q14129 220 aa1.89□□□□□ -2.11
VRK3-204ENST00000593912 KLK9Q2XQG4 91 aa1.89□□□□□ -2.11
VRK3-204ENST00000593912 VMA21Q3ZAQ7 101 aa1.89□□□□□ -2.11
VRK3-204ENST00000593912 AGKQ53H12 422 aa1.89□□□□□ -2.11
VRK3-204ENST00000593912 ELP2Q6IA86 826 aa1.89□□□□□ -2.11
VRK3-204ENST00000593912 CGB2Q6NT52 195 aa1.89□□□□□ -2.11
VRK3-204ENST00000593912 DEGS2Q6QHC5 323 aa1.89□□□□□ -2.11
VRK3-204ENST00000593912 ZNF600Q6ZNG1 722 aa1.89□□□□□ -2.11
VRK3-204ENST00000593912 ZNF679Q8IYX0 411 aa1.89□□□□□ -2.11
VRK3-204ENST00000593912 VKORC1L1Q8N0U8 176 aa1.89□□□□□ -2.11
VRK3-204ENST00000593912 STX19Q8N4C7 294 aa1.89□□□□□ -2.11
VRK3-204ENST00000593912 PRR26Q8N8Z3 221 aa1.89□□□□□ -2.11
VRK3-204ENST00000593912 EIF1ADQ8N9N8 165 aaKnown RBP1.89□□□□□ -2.11
VRK3-204ENST00000593912 RP9Q8TA86 221 aaKnown RBP1.89□□□□□ -2.11
VRK3-204ENST00000593912 EPS8L3Q8TE67 593 aaKnown RBP1.89□□□□□ -2.11
VRK3-204ENST00000593912 PP6455Q8WZ26 134 aa1.89□□□□□ -2.11
VRK3-204ENST00000593912 FGGYQ96C11 551 aa1.89□□□□□ -2.11
VRK3-204ENST00000593912 C5orf30Q96GV9 206 aa1.89□□□□□ -2.11
VRK3-204ENST00000593912 NSL1Q96IY1 281 aa1.89□□□□□ -2.11
VRK3-204ENST00000593912 SLC35E1Q96K37 410 aa1.89□□□□□ -2.11
VRK3-204ENST00000593912 IGF2BP2-AS1Q96M15 143 aa1.89□□□□□ -2.11
VRK3-204ENST00000593912 AGMATQ9BSE5 352 aa1.89□□□□□ -2.11
VRK3-204ENST00000593912 JAM3Q9BX67 310 aa1.89□□□□□ -2.11
VRK3-204ENST00000593912 TSSK6Q9BXA6 273 aa1.89□□□□□ -2.11
VRK3-204ENST00000593912 TSPYL1Q9H0U9 437 aa1.89□□□□□ -2.11
VRK3-204ENST00000593912 TMPRSS5Q9H3S3 457 aa1.89□□□□□ -2.11
VRK3-204ENST00000593912 RHOFQ9HBH0 211 aa1.89□□□□□ -2.11
VRK3-204ENST00000593912 RAB9BQ9NP90 201 aa1.89□□□□□ -2.11
VRK3-204ENST00000593912 NOP10Q9NPE3 64 aaKnown RBP1.89□□□□□ -2.11
VRK3-204ENST00000593912 ARMC1Q9NVT9 282 aa1.89□□□□□ -2.11
VRK3-204ENST00000593912 OR1A1Q9P1Q5 309 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms