RNA–Protein interactions for RNA: ENST00000593267.2

CACNA1A-213, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 2

Gene CACNA1A, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-213ENST00000593267 EBI3Q14213 229 aa9.26□□□□□ -0.93
CACNA1A-213ENST00000593267 PRSS54Q6PEW0 395 aa9.26□□□□□ -0.93
CACNA1A-213ENST00000593267 FOXRED2Q8IWF2 684 aa9.26□□□□□ -0.93
CACNA1A-213ENST00000593267 FAM71E2Q8N5Q1 922 aa9.26□□□□□ -0.93
CACNA1A-213ENST00000593267 RNF126Q9BV68 326 aa9.26□□□□□ -0.93
CACNA1A-213ENST00000593267 C11orf1Q9H5F2 150 aa9.26□□□□□ -0.93
CACNA1A-213ENST00000593267 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.26□□□□□ -0.93
CACNA1A-213ENST00000593267 ZFP57Q9NU63 452 aa9.26□□□□□ -0.93
CACNA1A-213ENST00000593267 MBD2Q9UBB5 411 aa9.26□□□□□ -0.93
CACNA1A-213ENST00000593267 RCL1Q9Y2P8 373 aaKnown RBP9.26□□□□□ -0.93
CACNA1A-213ENST00000593267 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.26□□□□□ -0.93
CACNA1A-213ENST00000593267 C15orf61A6NNL5 157 aa9.25□□□□□ -0.93
CACNA1A-213ENST00000593267 HMSDA8MTL9 139 aa9.25□□□□□ -0.93
CACNA1A-213ENST00000593267 SMAD7O15105 426 aaKnown RBP9.25□□□□□ -0.93
CACNA1A-213ENST00000593267 ST8SIA3O43173 380 aa9.25□□□□□ -0.93
CACNA1A-213ENST00000593267 KBTBD11O94819 623 aa9.25□□□□□ -0.93
CACNA1A-213ENST00000593267 IGKV1D-33P01593 117 aa9.25□□□□□ -0.93
CACNA1A-213ENST00000593267 IGKV1-33P01594 117 aa9.25□□□□□ -0.93
CACNA1A-213ENST00000593267 FGF2P09038 288 aa9.25□□□□□ -0.93
CACNA1A-213ENST00000593267 PAX6P26367 422 aa9.25□□□□□ -0.93
CACNA1A-213ENST00000593267 NKX2-5P52952 324 aaPredicted RBP9.25□□□□□ -0.93
CACNA1A-213ENST00000593267 UBE2KP61086 200 aa9.25□□□□□ -0.93
CACNA1A-213ENST00000593267 KRTAP1-1Q07627 177 aa9.25□□□□□ -0.93
CACNA1A-213ENST00000593267 VMA21Q3ZAQ7 101 aa9.25□□□□□ -0.93
CACNA1A-213ENST00000593267 CXorf66Q5JRM2 361 aaPredicted RBP9.25□□□□□ -0.93
CACNA1A-213ENST00000593267 TMEM65Q6PI78 240 aa9.25□□□□□ -0.93
CACNA1A-213ENST00000593267 BRD3OSQ6XYD6 125 aa9.25□□□□□ -0.93
CACNA1A-213ENST00000593267 OR4A5Q8NH83 315 aa9.25□□□□□ -0.93
CACNA1A-213ENST00000593267 VSTM2AQ8TAG5 236 aa9.25□□□□□ -0.93
CACNA1A-213ENST00000593267 THAP6Q8TBB0 222 aa9.25□□□□□ -0.93
CACNA1A-213ENST00000593267 RITA1Q96K30 269 aa9.25□□□□□ -0.93
CACNA1A-213ENST00000593267 TSNAXQ99598 290 aaKnown RBP9.25□□□□□ -0.93
CACNA1A-213ENST00000593267 OR5AC2Q9NZP5 309 aa9.25□□□□□ -0.93
CACNA1A-213ENST00000593267 HSPB7Q9UBY9 170 aa9.25□□□□□ -0.93
CACNA1A-213ENST00000593267 FOXA2Q9Y261 457 aaPredicted RBP9.25□□□□□ -0.93
CACNA1A-213ENST00000593267 LSM5Q9Y4Y9 91 aaKnown RBP9.25□□□□□ -0.93
CACNA1A-213ENST00000593267 FBN3Q75N90 2809 aa9.24□□□□□ -0.93
CACNA1A-213ENST00000593267 JMJD1CQ15652 2540 aa9.24□□□□□ -0.93
CACNA1A-213ENST00000593267 FXYD6-FXYD2A0A087WZ82 144 aa9.24□□□□□ -0.93
CACNA1A-213ENST00000593267 TRAV3A0A0B4J244 114 aa9.24□□□□□ -0.93
CACNA1A-213ENST00000593267 A0A0U1RQK1 487 aa9.24□□□□□ -0.93
CACNA1A-213ENST00000593267 UPK2O00526 184 aa9.24□□□□□ -0.93
CACNA1A-213ENST00000593267 SPDEFO95238 335 aa9.24□□□□□ -0.93
CACNA1A-213ENST00000593267 MOSP00540 346 aa9.24□□□□□ -0.93
CACNA1A-213ENST00000593267 CRYGBP07316 175 aa9.24□□□□□ -0.93
CACNA1A-213ENST00000593267 SNRNP70P08621 437 aaKnown RBP9.24□□□□□ -0.93
CACNA1A-213ENST00000593267 DYNLT3P51808 116 aa9.24□□□□□ -0.93
CACNA1A-213ENST00000593267 OR2B8PP59922 312 aa9.24□□□□□ -0.93
CACNA1A-213ENST00000593267 POLR2GP62487 172 aaKnown RBP eCLIP9.24□□□□□ -0.93
CACNA1A-213ENST00000593267 TNFRSF9Q07011 255 aa9.24□□□□□ -0.93
CACNA1A-213ENST00000593267 PDLIM3Q53GG5 364 aaPredicted RBP9.24□□□□□ -0.93
CACNA1A-213ENST00000593267 ZNF429Q86V71 674 aa9.24□□□□□ -0.93
CACNA1A-213ENST00000593267 THNSL2Q86YJ6 484 aa9.24□□□□□ -0.93
CACNA1A-213ENST00000593267 Q8N6K4 173 aa9.24□□□□□ -0.93
CACNA1A-213ENST00000593267 TEX45Q8NA69 505 aa9.24□□□□□ -0.93
CACNA1A-213ENST00000593267 OR2T10Q8NGZ9 312 aa9.24□□□□□ -0.93
CACNA1A-213ENST00000593267 OR4A16Q8NH70 328 aa9.24□□□□□ -0.93
CACNA1A-213ENST00000593267 GRPEL2Q8TAA5 225 aa9.24□□□□□ -0.93
CACNA1A-213ENST00000593267 TMEM167AQ8TBQ9 72 aa9.24□□□□□ -0.93
CACNA1A-213ENST00000593267 EAF1Q96JC9 268 aaPredicted RBP9.24□□□□□ -0.93
CACNA1A-213ENST00000593267 QTRT1Q9BXR0 403 aaKnown RBP9.24□□□□□ -0.93
CACNA1A-213ENST00000593267 MEGF9Q9H1U4 602 aa9.24□□□□□ -0.93
CACNA1A-213ENST00000593267 TMEM14BQ9NUH8 114 aa9.24□□□□□ -0.93
CACNA1A-213ENST00000593267 CACFD1Q9UGQ2 172 aa9.24□□□□□ -0.93
CACNA1A-213ENST00000593267 TNFSF18Q9UNG2 199 aa9.24□□□□□ -0.93
CACNA1A-213ENST00000593267 NSG2Q9Y328 171 aa9.24□□□□□ -0.93
CACNA1A-213ENST00000593267 SYNGR2O43760 224 aa9.23□□□□□ -0.93
CACNA1A-213ENST00000593267 SLC25A17O43808 307 aa9.23□□□□□ -0.93
CACNA1A-213ENST00000593267 CD5LO43866 347 aa9.23□□□□□ -0.93
CACNA1A-213ENST00000593267 SNAPC5O75971 98 aa9.23□□□□□ -0.93
CACNA1A-213ENST00000593267 NXPH3O95157 252 aa9.23□□□□□ -0.93
CACNA1A-213ENST00000593267 NDUFA3O95167 84 aa9.23□□□□□ -0.93
CACNA1A-213ENST00000593267 RLN2P04090 185 aa9.23□□□□□ -0.93
CACNA1A-213ENST00000593267 CNTFRP26992 372 aa9.23□□□□□ -0.93
CACNA1A-213ENST00000593267 BRS3P32247 399 aa9.23□□□□□ -0.93
CACNA1A-213ENST00000593267 PSG5Q15238 335 aa9.23□□□□□ -0.93
CACNA1A-213ENST00000593267 MRGPRG-AS1Q2M3A8 158 aa9.23□□□□□ -0.93
CACNA1A-213ENST00000593267 FBLN7Q53RD9 439 aa9.23□□□□□ -0.93
CACNA1A-213ENST00000593267 LAMTOR1Q6IAA8 161 aa9.23□□□□□ -0.93
CACNA1A-213ENST00000593267 C9orf139Q6ZV77 190 aa9.23□□□□□ -0.93
CACNA1A-213ENST00000593267 ZNF546Q86UE3 836 aa9.23□□□□□ -0.93
CACNA1A-213ENST00000593267 C9orf62Q8N4C0 152 aa9.23□□□□□ -0.93
CACNA1A-213ENST00000593267 NPBQ8NG41 125 aa9.23□□□□□ -0.93
CACNA1A-213ENST00000593267 OR52E5Q8NH55 327 aa9.23□□□□□ -0.93
CACNA1A-213ENST00000593267 NANPQ8TBE9 248 aa9.23□□□□□ -0.93
CACNA1A-213ENST00000593267 NUP50Q9UKX7 468 aa9.23□□□□□ -0.93
CACNA1A-213ENST00000593267 PRNDQ9UKY0 176 aa9.23□□□□□ -0.93
CACNA1A-213ENST00000593267 FN1P02751 2386 aaKnown RBP9.23□□□□□ -0.93
CACNA1A-213ENST00000593267 WNK2Q9Y3S1 2297 aa9.22□□□□□ -0.93
CACNA1A-213ENST00000593267 RNF222A6NCQ9 220 aa9.22□□□□□ -0.93
CACNA1A-213ENST00000593267 E5RGE8 158 aa9.22□□□□□ -0.93
CACNA1A-213ENST00000593267 NBR2O15453 112 aa9.22□□□□□ -0.93
CACNA1A-213ENST00000593267 ARPC5O15511 151 aa9.22□□□□□ -0.93
CACNA1A-213ENST00000593267 SSSCA1O60232 199 aa9.22□□□□□ -0.93
CACNA1A-213ENST00000593267 RBMXL2O75526 392 aaKnown RBP9.22□□□□□ -0.93
CACNA1A-213ENST00000593267 MED6O75586 246 aa9.22□□□□□ -0.93
CACNA1A-213ENST00000593267 LY6G6DO95868 133 aa9.22□□□□□ -0.93
CACNA1A-213ENST00000593267 FBP1P09467 338 aa9.22□□□□□ -0.93
CACNA1A-213ENST00000593267 CD24P25063 80 aa9.22□□□□□ -0.93
CACNA1A-213ENST00000593267 SPCS3P61009 180 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms