RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 MRPS7Q9Y2R9 242 aaKnown RBP13.08□□□□□ -0.32
RETREG3-212ENST00000593251 RBMX2Q9Y388 322 aaKnown RBP13.08□□□□□ -0.32
RETREG3-212ENST00000593251 PRELID3BQ9Y3B1 194 aa13.08□□□□□ -0.32
RETREG3-212ENST00000593251 FRAS1Q86XX4 4008 aa13.08□□□□□ -0.32
RETREG3-212ENST00000593251 IGKV1D-13A0A0B4J2D9 117 aa13.07□□□□□ -0.32
RETREG3-212ENST00000593251 IFITM5A6NNB3 132 aa13.07□□□□□ -0.32
RETREG3-212ENST00000593251 NPIPB5A8MRT5 1133 aa13.07□□□□□ -0.32
RETREG3-212ENST00000593251 PDCD5O14737 125 aa13.07□□□□□ -0.32
RETREG3-212ENST00000593251 KBTBD11O94819 623 aa13.07□□□□□ -0.32
RETREG3-212ENST00000593251 IGLV2-14P01704 120 aa13.07□□□□□ -0.32
RETREG3-212ENST00000593251 IGKV1-13P0DP09 117 aa13.07□□□□□ -0.32
RETREG3-212ENST00000593251 MYOD1P15172 320 aa13.07□□□□□ -0.32
RETREG3-212ENST00000593251 RAB6AP20340 208 aa13.07□□□□□ -0.32
RETREG3-212ENST00000593251 FAM209BQ5JX69 171 aa13.07□□□□□ -0.32
RETREG3-212ENST00000593251 UXS1Q8NBZ7 420 aa13.07□□□□□ -0.32
RETREG3-212ENST00000593251 GGTLC1Q9BX51 225 aa13.07□□□□□ -0.32
RETREG3-212ENST00000593251 ATG5Q9H1Y0 275 aa13.07□□□□□ -0.32
RETREG3-212ENST00000593251 OR2W1Q9Y3N9 320 aa13.07□□□□□ -0.32
RETREG3-212ENST00000593251 LOC102724200A0A096LPH7 203 aaPredicted RBP13.06□□□□□ -0.32
RETREG3-212ENST00000593251 SMIM30A4D0T7 59 aa13.06□□□□□ -0.32
RETREG3-212ENST00000593251 CXorf65A6NEN9 183 aa13.06□□□□□ -0.32
RETREG3-212ENST00000593251 HLA-DQB1P01920 261 aa13.06□□□□□ -0.32
RETREG3-212ENST00000593251 REG1AP05451 166 aa13.06□□□□□ -0.32
RETREG3-212ENST00000593251 CD36P16671 472 aa13.06□□□□□ -0.32
RETREG3-212ENST00000593251 AQP4P55087 323 aa13.06□□□□□ -0.32
RETREG3-212ENST00000593251 EWSR1Q01844 656 aaKnown RBP eCLIP13.06□□□□□ -0.32
RETREG3-212ENST00000593251 SSX1Q16384 188 aa13.06□□□□□ -0.32
RETREG3-212ENST00000593251 FAM106AQ4KMX7 169 aa13.06□□□□□ -0.32
RETREG3-212ENST00000593251 BTNL8Q6UX41 500 aa13.06□□□□□ -0.32
RETREG3-212ENST00000593251 PUSL1Q8N0Z8 303 aaKnown RBP13.06□□□□□ -0.32
RETREG3-212ENST00000593251 TMEM167AQ8TBQ9 72 aa13.06□□□□□ -0.32
RETREG3-212ENST00000593251 TCTEX1D2Q8WW35 142 aa13.06□□□□□ -0.32
RETREG3-212ENST00000593251 OR2A7Q96R45 310 aa13.06□□□□□ -0.32
RETREG3-212ENST00000593251 GPHA2Q96T91 129 aa13.06□□□□□ -0.32
RETREG3-212ENST00000593251 SLC2A9Q9NRM0 540 aa13.06□□□□□ -0.32
RETREG3-212ENST00000593251 SPATA2Q9UM82 520 aa13.06□□□□□ -0.32
RETREG3-212ENST00000593251 TRAV1-2A0A0B4J238 106 aa13.05□□□□□ -0.32
RETREG3-212ENST00000593251 METTL21EPA6NDL7 271 aa13.05□□□□□ -0.32
RETREG3-212ENST00000593251 ZNF735P0CB33 412 aa13.05□□□□□ -0.32
RETREG3-212ENST00000593251 DTYMKP23919 212 aa13.05□□□□□ -0.32
RETREG3-212ENST00000593251 CRHBPP24387 322 aa13.05□□□□□ -0.32
RETREG3-212ENST00000593251 BRWD1-AS2P59051 145 aa13.05□□□□□ -0.32
RETREG3-212ENST00000593251 CDNFQ49AH0 187 aa13.05□□□□□ -0.32
RETREG3-212ENST00000593251 TM4SF20Q53R12 229 aa13.05□□□□□ -0.32
RETREG3-212ENST00000593251 SSX9Q7RTT3 188 aa13.05□□□□□ -0.32
RETREG3-212ENST00000593251 OR4S2Q8NH73 311 aa13.05□□□□□ -0.32
RETREG3-212ENST00000593251 EEF1AKMT3Q96AZ1 226 aa13.05□□□□□ -0.32
RETREG3-212ENST00000593251 A0A0J9YWU9 116 aa13.04□□□□□ -0.32
RETREG3-212ENST00000593251 MFSD2BA6NFX1 497 aa13.04□□□□□ -0.32
RETREG3-212ENST00000593251 A8MWP6 167 aa13.04□□□□□ -0.32
RETREG3-212ENST00000593251 CRYGCP07315 174 aa13.04□□□□□ -0.32
RETREG3-212ENST00000593251 RAB3BP20337 219 aa13.04□□□□□ -0.32
RETREG3-212ENST00000593251 MYL9P24844 172 aa13.04□□□□□ -0.32
RETREG3-212ENST00000593251 PSMB6P28072 239 aa13.04□□□□□ -0.32
RETREG3-212ENST00000593251 UNQ9165/PRO28630Q6UXU0 137 aa13.04□□□□□ -0.32
RETREG3-212ENST00000593251 PRSS48Q7RTY5 328 aa13.04□□□□□ -0.32
RETREG3-212ENST00000593251 NR2C2APQ86WQ0 139 aa13.04□□□□□ -0.32
RETREG3-212ENST00000593251 VSTM2AQ8TAG5 236 aa13.04□□□□□ -0.32
RETREG3-212ENST00000593251 NUDCD2Q8WVJ2 157 aa13.04□□□□□ -0.32
RETREG3-212ENST00000593251 TAS2R8Q9NYW2 309 aa13.04□□□□□ -0.32
RETREG3-212ENST00000593251 IGHV3-35A0A0C4DH35 117 aa13.03□□□□□ -0.32
RETREG3-212ENST00000593251 CTRB1P17538 263 aa13.03□□□□□ -0.32
RETREG3-212ENST00000593251 MAS1LP35410 378 aa13.03□□□□□ -0.32
RETREG3-212ENST00000593251 EIF4EBP1Q13541 118 aaPredicted RBP13.03□□□□□ -0.32
RETREG3-212ENST00000593251 CTRB2Q6GPI1 263 aa13.03□□□□□ -0.32
RETREG3-212ENST00000593251 MFSD4AQ8N468 514 aa13.03□□□□□ -0.32
RETREG3-212ENST00000593251 NRG4Q8WWG1 115 aa13.03□□□□□ -0.32
RETREG3-212ENST00000593251 HSD17B10Q99714 261 aaKnown RBP13.03□□□□□ -0.32
RETREG3-212ENST00000593251 KRTAP17-1Q9BYP8 105 aa13.03□□□□□ -0.32
RETREG3-212ENST00000593251 CGB1A6NKQ9 187 aa13.02□□□□□ -0.33
RETREG3-212ENST00000593251 ANKRD65E5RJM6 399 aa13.02□□□□□ -0.33
RETREG3-212ENST00000593251 SLC22A5O76082 557 aa13.02□□□□□ -0.33
RETREG3-212ENST00000593251 DHFRP00374 187 aa13.02□□□□□ -0.33
RETREG3-212ENST00000593251 CLEC3BP05452 202 aa13.02□□□□□ -0.33
RETREG3-212ENST00000593251 CTXN2P0C2S0 81 aa13.02□□□□□ -0.33
RETREG3-212ENST00000593251 DEFA4P12838 97 aa13.02□□□□□ -0.33
RETREG3-212ENST00000593251 ZNF585BQ52M93 769 aa13.02□□□□□ -0.33
RETREG3-212ENST00000593251 HACD4Q5VWC8 232 aa13.02□□□□□ -0.33
RETREG3-212ENST00000593251 OR4A47Q6IF82 309 aa13.02□□□□□ -0.33
RETREG3-212ENST00000593251 UBQLN2Q9UHD9 624 aa13.02□□□□□ -0.33
RETREG3-212ENST00000593251 IGLV11-55A0A075B6I3 123 aa13.01□□□□□ -0.33
RETREG3-212ENST00000593251 TMEM235A6NFC5 223 aa13.01□□□□□ -0.33
RETREG3-212ENST00000593251 TNFSF12O43508 249 aa13.01□□□□□ -0.33
RETREG3-212ENST00000593251 HIST1H1BP16401 226 aaKnown RBP13.01□□□□□ -0.33
RETREG3-212ENST00000593251 GPR183P32249 361 aa13.01□□□□□ -0.33
RETREG3-212ENST00000593251 RPL8P62917 257 aaKnown RBP13.01□□□□□ -0.33
RETREG3-212ENST00000593251 ARL6IP1Q15041 203 aa13.01□□□□□ -0.33
RETREG3-212ENST00000593251 ANKRD55Q3KP44 614 aa13.01□□□□□ -0.33
RETREG3-212ENST00000593251 C22orf42Q6IC83 251 aa13.01□□□□□ -0.33
RETREG3-212ENST00000593251 CNIH2Q6PI25 160 aa13.01□□□□□ -0.33
RETREG3-212ENST00000593251 RBPMS2Q6ZRY4 209 aaKnown RBP13.01□□□□□ -0.33
RETREG3-212ENST00000593251 LYG2Q86SG7 212 aa13.01□□□□□ -0.33
RETREG3-212ENST00000593251 OR1L6Q8NGR2 347 aa13.01□□□□□ -0.33
RETREG3-212ENST00000593251 SSX5O60225 188 aa13□□□□□ -0.33
RETREG3-212ENST00000593251 HRASP01112 189 aa13□□□□□ -0.33
RETREG3-212ENST00000593251 HLA-GP17693 338 aa13□□□□□ -0.33
RETREG3-212ENST00000593251 TBCEQ15813 527 aaPredicted RBP13□□□□□ -0.33
RETREG3-212ENST00000593251 KLK9Q2XQG4 91 aa13□□□□□ -0.33
RETREG3-212ENST00000593251 DEFB135Q30KP9 77 aa13□□□□□ -0.33
RETREG3-212ENST00000593251 ZNF367Q7RTV3 350 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms