RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 DMBX1Q8NFW5 382 aa11.74□□□□□ -0.53
DDX39A-221ENST00000593026 TMEM167AQ8TBQ9 72 aa11.74□□□□□ -0.53
DDX39A-221ENST00000593026 R3HDM4Q96D70 268 aa11.74□□□□□ -0.53
DDX39A-221ENST00000593026 FAM103A1Q9BTL3 118 aaKnown RBP11.74□□□□□ -0.53
DDX39A-221ENST00000593026 WDR12Q9GZL7 423 aaKnown RBP11.74□□□□□ -0.53
DDX39A-221ENST00000593026 VSIG4Q9Y279 399 aa11.74□□□□□ -0.53
DDX39A-221ENST00000593026 WSB1Q9Y6I7 421 aa11.74□□□□□ -0.53
DDX39A-221ENST00000593026 TEX13DA0A0J9YY54 714 aaPredicted RBP11.73□□□□□ -0.53
DDX39A-221ENST00000593026 MARCH11A6NNE9 402 aa11.73□□□□□ -0.53
DDX39A-221ENST00000593026 G3V318 75 aa11.73□□□□□ -0.53
DDX39A-221ENST00000593026 ARPC1BO15143 372 aaKnown RBP11.73□□□□□ -0.53
DDX39A-221ENST00000593026 EGR2P11161 476 aaPredicted RBP11.73□□□□□ -0.53
DDX39A-221ENST00000593026 SSBP2P81877 361 aaPredicted RBP11.73□□□□□ -0.53
DDX39A-221ENST00000593026 TMEM267Q0VDI3 215 aaPredicted RBP11.73□□□□□ -0.53
DDX39A-221ENST00000593026 HIST2H2BDQ6DRA6 164 aa11.73□□□□□ -0.53
DDX39A-221ENST00000593026 COMMD1Q8N668 190 aa11.73□□□□□ -0.53
DDX39A-221ENST00000593026 OR4A5Q8NH83 315 aa11.73□□□□□ -0.53
DDX39A-221ENST00000593026 SGMS2Q8NHU3 365 aa11.73□□□□□ -0.53
DDX39A-221ENST00000593026 TP53RKQ96S44 253 aa11.73□□□□□ -0.53
DDX39A-221ENST00000593026 SLC25A21Q9BQT8 299 aaPredicted RBP11.73□□□□□ -0.53
DDX39A-221ENST00000593026 C7orf50Q9BRJ6 194 aaKnown RBP11.73□□□□□ -0.53
DDX39A-221ENST00000593026 TMEM140Q9NV12 185 aa11.73□□□□□ -0.53
DDX39A-221ENST00000593026 BET1LQ9NYM9 111 aa11.73□□□□□ -0.53
DDX39A-221ENST00000593026 CRYM-AS1A6NIL9 109 aa11.72□□□□□ -0.53
DDX39A-221ENST00000593026 B3GALNT1O75752 331 aa11.72□□□□□ -0.53
DDX39A-221ENST00000593026 KRASP01116 189 aa11.72□□□□□ -0.53
DDX39A-221ENST00000593026 RPA2P15927 270 aa11.72□□□□□ -0.53
DDX39A-221ENST00000593026 G6PCP35575 357 aa11.72□□□□□ -0.53
DDX39A-221ENST00000593026 CFHR3Q02985 330 aa11.72□□□□□ -0.53
DDX39A-221ENST00000593026 TCTEX1D4Q5JR98 221 aa11.72□□□□□ -0.53
DDX39A-221ENST00000593026 TEX38Q6PEX7 206 aa11.72□□□□□ -0.53
DDX39A-221ENST00000593026 UNQ5815/PRO19632Q6UWF5 114 aa11.72□□□□□ -0.53
DDX39A-221ENST00000593026 CITED2Q99967 270 aaPredicted RBP11.72□□□□□ -0.53
DDX39A-221ENST00000593026 NAA60Q9H7X0 242 aa11.72□□□□□ -0.53
DDX39A-221ENST00000593026 NUBP2Q9Y5Y2 271 aa11.72□□□□□ -0.53
DDX39A-221ENST00000593026 PLXNB1O43157 2135 aa11.71□□□□□ -0.53
DDX39A-221ENST00000593026 TCRBV4S1A1TA0A5B7 111 aa11.71□□□□□ -0.53
DDX39A-221ENST00000593026 IGHG4P01861 327 aa11.71□□□□□ -0.53
DDX39A-221ENST00000593026 OPN1MWP04001 364 aa11.71□□□□□ -0.53
DDX39A-221ENST00000593026 OPN1MW2P0DN77 364 aa11.71□□□□□ -0.53
DDX39A-221ENST00000593026 OPN1MW3P0DN78 364 aa11.71□□□□□ -0.53
DDX39A-221ENST00000593026 AKR1C4P17516 323 aa11.71□□□□□ -0.53
DDX39A-221ENST00000593026 MAS1LP35410 378 aa11.71□□□□□ -0.53
DDX39A-221ENST00000593026 CCR6P51684 374 aa11.71□□□□□ -0.53
DDX39A-221ENST00000593026 RPL8P62917 257 aaKnown RBP11.71□□□□□ -0.53
DDX39A-221ENST00000593026 CD83Q01151 205 aa11.71□□□□□ -0.53
DDX39A-221ENST00000593026 RBMS2Q15434 407 aaKnown RBP11.71□□□□□ -0.53
DDX39A-221ENST00000593026 TRIM16LQ309B1 348 aa11.71□□□□□ -0.53
DDX39A-221ENST00000593026 SP6Q3SY56 376 aa11.71□□□□□ -0.53
DDX39A-221ENST00000593026 AKIRIN2Q53H80 203 aa11.71□□□□□ -0.53
DDX39A-221ENST00000593026 C19orf54Q5BKX5 351 aa11.71□□□□□ -0.53
DDX39A-221ENST00000593026 KHDC1LQ5JSQ8 128 aa11.71□□□□□ -0.53
DDX39A-221ENST00000593026 TMED4Q7Z7H5 227 aa11.71□□□□□ -0.53
DDX39A-221ENST00000593026 SGPP2Q8IWX5 399 aa11.71□□□□□ -0.53
DDX39A-221ENST00000593026 MINDY2Q8NBR6 621 aa11.71□□□□□ -0.53
DDX39A-221ENST00000593026 ADAD2Q8NCV1 583 aaKnown RBP11.71□□□□□ -0.53
DDX39A-221ENST00000593026 LFNGQ8NES3 379 aa11.71□□□□□ -0.53
DDX39A-221ENST00000593026 SRSF12Q8WXF0 261 aaKnown RBP11.71□□□□□ -0.53
DDX39A-221ENST00000593026 PHB2Q99623 299 aa11.71□□□□□ -0.53
DDX39A-221ENST00000593026 FOXA2Q9Y261 457 aaPredicted RBP11.71□□□□□ -0.53
DDX39A-221ENST00000593026 ANK2Q01484 3957 aa11.71□□□□□ -0.54
DDX39A-221ENST00000593026 TET2Q6N021 2002 aaPredicted RBP11.7□□□□□ -0.54
DDX39A-221ENST00000593026 A0A1W2PN81 502 aa11.7□□□□□ -0.54
DDX39A-221ENST00000593026 MSGN1A6NI15 193 aa11.7□□□□□ -0.54
DDX39A-221ENST00000593026 UPK2O00526 184 aa11.7□□□□□ -0.54
DDX39A-221ENST00000593026 IGKV1-39P01597 117 aa11.7□□□□□ -0.54
DDX39A-221ENST00000593026 IGKV1D-39P04432 117 aa11.7□□□□□ -0.54
DDX39A-221ENST00000593026 ELANEP08246 267 aa11.7□□□□□ -0.54
DDX39A-221ENST00000593026 OR5AC1P0C628 307 aa11.7□□□□□ -0.54
DDX39A-221ENST00000593026 HLA-GP17693 338 aa11.7□□□□□ -0.54
DDX39A-221ENST00000593026 UCP1P25874 307 aa11.7□□□□□ -0.54
DDX39A-221ENST00000593026 PPIFP30405 207 aaKnown RBP11.7□□□□□ -0.54
DDX39A-221ENST00000593026 CHRNA7P36544 502 aa11.7□□□□□ -0.54
DDX39A-221ENST00000593026 FOXE3Q13461 319 aa11.7□□□□□ -0.54
DDX39A-221ENST00000593026 CXorf66Q5JRM2 361 aaPredicted RBP11.7□□□□□ -0.54
DDX39A-221ENST00000593026 C10orf55Q5SWW7 151 aa11.7□□□□□ -0.54
DDX39A-221ENST00000593026 NDUFA11Q86Y39 141 aa11.7□□□□□ -0.54
DDX39A-221ENST00000593026 TMEM230Q96A57 120 aa11.7□□□□□ -0.54
DDX39A-221ENST00000593026 SEC22AQ96IW7 307 aa11.7□□□□□ -0.54
DDX39A-221ENST00000593026 SPIN2AQ99865 258 aa11.7□□□□□ -0.54
DDX39A-221ENST00000593026 SPIN2BQ9BPZ2 258 aa11.7□□□□□ -0.54
DDX39A-221ENST00000593026 TMEM222Q9H0R3 208 aa11.7□□□□□ -0.54
DDX39A-221ENST00000593026 TSSC4Q9Y5U2 329 aaPredicted RBP11.7□□□□□ -0.54
DDX39A-221ENST00000593026 TRAV3A0A0B4J244 114 aa11.69□□□□□ -0.54
DDX39A-221ENST00000593026 A0A1W2PRX2 142 aa11.69□□□□□ -0.54
DDX39A-221ENST00000593026 M0QZ24 198 aa11.69□□□□□ -0.54
DDX39A-221ENST00000593026 PLA2G10O15496 165 aa11.69□□□□□ -0.54
DDX39A-221ENST00000593026 LYRM1O43325 122 aa11.69□□□□□ -0.54
DDX39A-221ENST00000593026 SNAPC5O75971 98 aa11.69□□□□□ -0.54
DDX39A-221ENST00000593026 ATG12O94817 140 aa11.69□□□□□ -0.54
DDX39A-221ENST00000593026 NDUFB6O95139 128 aa11.69□□□□□ -0.54
DDX39A-221ENST00000593026 IL6RP08887 468 aaPredicted RBP11.69□□□□□ -0.54
DDX39A-221ENST00000593026 FGF2P09038 288 aa11.69□□□□□ -0.54
DDX39A-221ENST00000593026 BTCP35070 178 aa11.69□□□□□ -0.54
DDX39A-221ENST00000593026 RPL27AP46776 148 aaKnown RBP11.69□□□□□ -0.54
DDX39A-221ENST00000593026 AKR1C2P52895 323 aa11.69□□□□□ -0.54
DDX39A-221ENST00000593026 DHODHQ02127 395 aa11.69□□□□□ -0.54
DDX39A-221ENST00000593026 C2orf68Q2NKX9 166 aa11.69□□□□□ -0.54
DDX39A-221ENST00000593026 NSUN5P1Q3KNT7 163 aa11.69□□□□□ -0.54
DDX39A-221ENST00000593026 H2BFWTQ7Z2G1 175 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms