RNA–Protein interactions for RNA: ENST00000592065.2

GFAP-221, Transcript of glial fibrillary acidic protein, humanhuman

TSL 3

Gene GFAP, Length 2,539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-221ENST00000592065 TAF15Q92804 592 aaKnown RBP eCLIP11.15□□□□□ -0.62
GFAP-221ENST00000592065 NOL4LQ96MY1 436 aaPredicted RBP11.15□□□□□ -0.62
GFAP-221ENST00000592065 RBKSQ9H477 322 aa11.15□□□□□ -0.62
GFAP-221ENST00000592065 C2CD3Q4AC94 2353 aa11.15□□□□□ -0.62
GFAP-221ENST00000592065 TRAV39A0A0B4J263 110 aa11.15□□□□□ -0.62
GFAP-221ENST00000592065 CEBPZOSA8MTT3 80 aa11.15□□□□□ -0.62
GFAP-221ENST00000592065 IFNA1P01562 189 aa11.15□□□□□ -0.62
GFAP-221ENST00000592065 GNG10P50151 68 aa11.15□□□□□ -0.62
GFAP-221ENST00000592065 RPP30P78346 268 aaKnown RBP11.15□□□□□ -0.62
GFAP-221ENST00000592065 PDZD11Q5EBL8 140 aa11.15□□□□□ -0.62
GFAP-221ENST00000592065 TIMM23BQ5SRD1 257 aa11.15□□□□□ -0.62
GFAP-221ENST00000592065 CENPVQ7Z7K6 275 aaPredicted RBP11.15□□□□□ -0.62
GFAP-221ENST00000592065 TIMM9Q9Y5J7 89 aa11.15□□□□□ -0.62
GFAP-221ENST00000592065 CUBNO60494 3623 aa11.15□□□□□ -0.62
GFAP-221ENST00000592065 EREGO14944 169 aa11.14□□□□□ -0.63
GFAP-221ENST00000592065 CA6P23280 308 aa11.14□□□□□ -0.63
GFAP-221ENST00000592065 GAGE1Q13065 139 aa11.14□□□□□ -0.63
GFAP-221ENST00000592065 SPANXN5Q5MJ07 72 aa11.14□□□□□ -0.63
GFAP-221ENST00000592065 TMEM14EPQ6UXP3 125 aa11.14□□□□□ -0.63
GFAP-221ENST00000592065 CCL19Q99731 98 aa11.14□□□□□ -0.63
GFAP-221ENST00000592065 MBNL3Q9NUK0 354 aaKnown RBP11.14□□□□□ -0.63
GFAP-221ENST00000592065 PRSS47A8MTI9 375 aa11.14□□□□□ -0.63
GFAP-221ENST00000592065 LINC00614P0C842 121 aa11.14□□□□□ -0.63
GFAP-221ENST00000592065 PGA5P0DJD9 388 aa11.14□□□□□ -0.63
GFAP-221ENST00000592065 ERVK11-1P61568 191 aa11.14□□□□□ -0.63
GFAP-221ENST00000592065 SAPCD1Q5SSQ6 148 aa11.14□□□□□ -0.63
GFAP-221ENST00000592065 CYP2G1PQ6ZSU1 146 aa11.14□□□□□ -0.63
GFAP-221ENST00000592065 RPP25LQ8N5L8 163 aaKnown RBP11.14□□□□□ -0.63
GFAP-221ENST00000592065 DRAM1Q8N682 238 aa11.14□□□□□ -0.63
GFAP-221ENST00000592065 OR1K1Q8NGR3 316 aa11.14□□□□□ -0.63
GFAP-221ENST00000592065 PYGO2Q9BRQ0 406 aa11.14□□□□□ -0.63
GFAP-221ENST00000592065 NAT8Q9UHE5 227 aa11.14□□□□□ -0.63
GFAP-221ENST00000592065 SHISA9B4DS77 424 aa11.13□□□□□ -0.63
GFAP-221ENST00000592065 ZNF737O75373 536 aa11.13□□□□□ -0.63
GFAP-221ENST00000592065 OR2H2O95918 312 aa11.13□□□□□ -0.63
GFAP-221ENST00000592065 IGKV1D-33P01593 117 aa11.13□□□□□ -0.63
GFAP-221ENST00000592065 IGKV1-33P01594 117 aa11.13□□□□□ -0.63
GFAP-221ENST00000592065 CD3EP07766 207 aa11.13□□□□□ -0.63
GFAP-221ENST00000592065 FABP4P15090 132 aa11.13□□□□□ -0.63
GFAP-221ENST00000592065 ELLP55199 621 aaPredicted RBP11.13□□□□□ -0.63
GFAP-221ENST00000592065 SLC38A11Q08AI6 406 aa11.13□□□□□ -0.63
GFAP-221ENST00000592065 DEFB113Q30KQ7 82 aa11.13□□□□□ -0.63
GFAP-221ENST00000592065 SMR3AQ99954 134 aa11.13□□□□□ -0.63
GFAP-221ENST00000592065 PITPNC1Q9UKF7 332 aa11.13□□□□□ -0.63
GFAP-221ENST00000592065 KCNS2Q9ULS6 477 aa11.13□□□□□ -0.63
GFAP-221ENST00000592065 GOLT1BQ9Y3E0 138 aa11.13□□□□□ -0.63
GFAP-221ENST00000592065 WIPI2Q9Y4P8 454 aa11.13□□□□□ -0.63
GFAP-221ENST00000592065 UBE2L5PA0A1B0GUS4 154 aa11.13□□□□□ -0.63
GFAP-221ENST00000592065 PFN1P07737 140 aaKnown RBP11.13□□□□□ -0.63
GFAP-221ENST00000592065 ZNF16P17020 682 aaPredicted RBP11.13□□□□□ -0.63
GFAP-221ENST00000592065 CD40P25942 277 aa11.13□□□□□ -0.63
GFAP-221ENST00000592065 MEF2BQ02080 365 aaPredicted RBP11.13□□□□□ -0.63
GFAP-221ENST00000592065 WDR86Q86TI4 376 aa11.13□□□□□ -0.63
GFAP-221ENST00000592065 FGFRL1Q8N441 504 aa11.13□□□□□ -0.63
GFAP-221ENST00000592065 OR10A7Q8NGE5 316 aa11.13□□□□□ -0.63
GFAP-221ENST00000592065 TRAPPC2LQ9UL33 140 aa11.13□□□□□ -0.63
GFAP-221ENST00000592065 NSD1Q96L73 2696 aaPredicted RBP11.13□□□□□ -0.63
GFAP-221ENST00000592065 SIRPB1O00241 398 aa11.12□□□□□ -0.63
GFAP-221ENST00000592065 IDH3GP51553 393 aaPredicted RBP11.12□□□□□ -0.63
GFAP-221ENST00000592065 VHLLQ6RSH7 139 aa11.12□□□□□ -0.63
GFAP-221ENST00000592065 Q71RC1 249 aaPredicted RBP11.12□□□□□ -0.63
GFAP-221ENST00000592065 KRTAP1-3Q8IUG1 177 aa11.12□□□□□ -0.63
GFAP-221ENST00000592065 Q8IYB0 196 aa11.12□□□□□ -0.63
GFAP-221ENST00000592065 LHX4Q969G2 390 aa11.12□□□□□ -0.63
GFAP-221ENST00000592065 HIST1H2BLQ99880 126 aa11.12□□□□□ -0.63
GFAP-221ENST00000592065 SMIM7Q9BQ49 75 aa11.12□□□□□ -0.63
GFAP-221ENST00000592065 ATG101Q9BSB4 218 aa11.12□□□□□ -0.63
GFAP-221ENST00000592065 TMEM204Q9BSN7 226 aa11.12□□□□□ -0.63
GFAP-221ENST00000592065 SRD5A3Q9H8P0 318 aa11.12□□□□□ -0.63
GFAP-221ENST00000592065 SLC39A9Q9NUM3 307 aa11.12□□□□□ -0.63
GFAP-221ENST00000592065 HSPB7Q9UBY9 170 aa11.12□□□□□ -0.63
GFAP-221ENST00000592065 RBM7Q9Y580 266 aaKnown RBP11.12□□□□□ -0.63
GFAP-221ENST00000592065 JMJD1CQ15652 2540 aa11.12□□□□□ -0.63
GFAP-221ENST00000592065 DLEU1O43261 78 aa11.12□□□□□ -0.63
GFAP-221ENST00000592065 LY6HO94772 140 aa11.12□□□□□ -0.63
GFAP-221ENST00000592065 KBTBD11O94819 623 aa11.12□□□□□ -0.63
GFAP-221ENST00000592065 P0C879 139 aa11.12□□□□□ -0.63
GFAP-221ENST00000592065 ZNF25P17030 456 aaPredicted RBP11.12□□□□□ -0.63
GFAP-221ENST00000592065 HOXC12P31275 282 aa11.12□□□□□ -0.63
GFAP-221ENST00000592065 TMEM241Q24JQ0 296 aa11.12□□□□□ -0.63
GFAP-221ENST00000592065 NCR3LG1Q68D85 454 aa11.12□□□□□ -0.63
GFAP-221ENST00000592065 OR4X1Q8NH49 305 aa11.12□□□□□ -0.63
GFAP-221ENST00000592065 SNX22Q96L94 193 aa11.12□□□□□ -0.63
GFAP-221ENST00000592065 PACRGQ96M98 296 aaPredicted RBP11.12□□□□□ -0.63
GFAP-221ENST00000592065 RTL8AQ9BWD3 113 aa11.12□□□□□ -0.63
GFAP-221ENST00000592065 OR51B6Q9H340 312 aa11.12□□□□□ -0.63
GFAP-221ENST00000592065 ARFGEF3Q5TH69 2177 aa11.12□□□□□ -0.63
GFAP-221ENST00000592065 NAV3Q8IVL0 2385 aa11.11□□□□□ -0.63
GFAP-221ENST00000592065 IGHV1-18A0A0C4DH31 117 aa11.11□□□□□ -0.63
GFAP-221ENST00000592065 RNF212BA8MTL3 300 aa11.11□□□□□ -0.63
GFAP-221ENST00000592065 TMEM250H0YL14 139 aa11.11□□□□□ -0.63
GFAP-221ENST00000592065 ZNF146Q15072 292 aa11.11□□□□□ -0.63
GFAP-221ENST00000592065 CIARTQ8N365 385 aaPredicted RBP11.11□□□□□ -0.63
GFAP-221ENST00000592065 SCCPDHQ8NBX0 429 aa11.11□□□□□ -0.63
GFAP-221ENST00000592065 MAPK1IP1LQ8NDC0 245 aa11.11□□□□□ -0.63
GFAP-221ENST00000592065 UBALD1Q8TB05 177 aa11.11□□□□□ -0.63
GFAP-221ENST00000592065 BCL2L2Q92843 193 aaPredicted RBP11.11□□□□□ -0.63
GFAP-221ENST00000592065 E7EQL1 145 aa11.11□□□□□ -0.63
GFAP-221ENST00000592065 CD55P08174 381 aa11.11□□□□□ -0.63
GFAP-221ENST00000592065 MRPS11P82912 194 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms